FFCP PHASE1:Hg19::chr19:35646149..35646177,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:35646149..35646177,+ to FFCP PHASE1:Hg19::chr19:35646149..35646177,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53827 | |EntrezGene=53827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4029 | |HGNC=4029 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DB9 | |UniProt=Q96DB9 | ||
|association_with_transcript=473bp_to_ENST00000342879_5end | |||
|cluster_id=chr19:35646149..35646177,+ | |||
|coexpression_cluster_id=C2349 | |||
|description=CAGE_peak_5_at_FXYD5_5end | |||
|id=chr19:35646149..35646177,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.64e-23!42;CL:0000003!5.41e-21!722;CL:0000860!5.49e-21!45;CL:0000548!8.96e-20!679;CL:0000004!8.96e-20!679;CL:0000255!8.96e-20!679;CL:0000144!1.83e-19!625;CL:0000012!3.93e-19!682;CL:0000048!3.01e-17!430;CL:0000034!5.97e-17!444;CL:0000839!6.50e-17!70;CL:0000723!6.70e-17!436;CL:0000557!3.24e-16!71;CL:0000766!5.48e-16!76;CL:0002194!7.52e-16!63;CL:0000576!7.52e-16!63;CL:0000040!7.52e-16!63;CL:0000559!7.52e-16!63;CL:0002371!1.33e-15!591;CL:0002009!5.51e-15!65;CL:0000763!7.17e-14!112;CL:0000049!7.17e-14!112;CL:0000134!1.87e-11!358;CL:0000063!3.95e-11!578;CL:0002320!4.23e-11!365;CL:0000359!2.72e-09!32;CL:0000192!1.23e-08!42;CL:0000514!1.23e-08!42;CL:0000187!1.24e-07!54;CL:0000219!1.90e-07!390;CL:0000680!7.20e-07!57;CL:0000056!7.20e-07!57;CL:0000355!7.20e-07!57;CL:0000183!7.37e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.29e-24;33!CL:0002057;8.29e-24;33!CL:0000473;1.63e-20;39!CL:0000234;1.63e-20;39!CL:0000576;1.23e-15;48!CL:0000766;1.84e-13;69!CL:0000763;5.05e-08;100!CL:0000359;1.55e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.55e-31,48;CL:0000234,5.55e-31,48;CL:0000860,9.44e-31,42;CL:0002057,9.44e-31,42;CL:0000766,8.86e-24,72;CL:0000839,1.51e-23,66;CL:0000557,6.58e-23,67;CL:0002194,5.77e-22,59;CL:0000576,5.77e-22,59;CL:0000040,5.77e-22,59;CL:0000559,5.77e-22,59;CL:0000763,1.10e-21,108;CL:0000049,1.10e-21,108;CL:0002009,1.12e-20,61;CL:0000048,1.04e-12,427;CL:0000723,2.29e-12,433;CL:0000034,5.96e-12,441;CL:0000134,5.47e-10,354;CL:0002032,7.40e-10,161;CL:0000837,7.40e-10,161;CL:0002320,2.12e-09,361;CL:0000988,9.98e-09,177;CL:0000037,1.29e-08,168;CL:0000359,5.10e-08,32;CL:0002031,5.53e-08,120;CL:0000219,5.35e-07,386;CL:0000738,8.70e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-22;42!CL:0000049;1.10e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.94e-23!216;UBERON:0002390!3.47e-16!102;UBERON:0003061!3.47e-16!102;UBERON:0002193!5.18e-15!112;UBERON:0002204!2.02e-14!167;UBERON:0002371!1.68e-13!80;UBERON:0000926!1.50e-12!448;UBERON:0004120!1.50e-12!448;UBERON:0006603!1.50e-12!448;UBERON:0001474!5.99e-12!86;UBERON:0004765!1.44e-10!101;UBERON:0001434!1.44e-10!101;UBERON:0002384!4.11e-10!375;UBERON:0002405!1.27e-08!115;UBERON:0004535!1.96e-08!110;UBERON:0001637!2.45e-08!42;UBERON:0003509!2.45e-08!42;UBERON:0004572!2.45e-08!42;UBERON:0001009!4.33e-08!113;UBERON:0004872!1.73e-07!84;UBERON:0004573!3.25e-07!33;UBERON:0004571!3.25e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.84e-23,203;UBERON:0002390,7.26e-19,98;UBERON:0003061,7.26e-19,98;UBERON:0002371,5.52e-18,76;UBERON:0002193,1.73e-17,108;UBERON:0001474,3.69e-16,82;UBERON:0004765,5.29e-16,90;UBERON:0000926,7.66e-16,315;UBERON:0004120,7.66e-16,315;UBERON:0006603,7.66e-16,315;UBERON:0002204,4.18e-14,167;UBERON:0002405,1.05e-13,93;UBERON:0001434,1.08e-13,100;UBERON:0002384,3.01e-08,371 | |||
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| ||
|short_description=p5@FXYD5 | |||
}} | }} |
Latest revision as of 10:32, 17 September 2015
Short description: | p5@FXYD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FXYD5_5end |
Coexpression cluster: | C2349_Mast_CD14_Smooth_Mesenchymal_Hair_mesothelioma_papillotubular |
Association with transcript: | 473bp_to_ENST00000342879_5end |
EntrezGene: | FXYD5 |
HGNC: | 4029 |
UniProt: | Q96DB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.55e-31 | 48 |
phagocyte | 5.55e-31 | 48 |
classical monocyte | 9.44e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.44e-31 | 42 |
myeloid leukocyte | 8.86e-24 | 72 |
myeloid lineage restricted progenitor cell | 1.51e-23 | 66 |
granulocyte monocyte progenitor cell | 6.58e-23 | 67 |
monopoietic cell | 5.77e-22 | 59 |
monocyte | 5.77e-22 | 59 |
monoblast | 5.77e-22 | 59 |
promonocyte | 5.77e-22 | 59 |
myeloid cell | 1.10e-21 | 108 |
common myeloid progenitor | 1.10e-21 | 108 |
macrophage dendritic cell progenitor | 1.12e-20 | 61 |
multi fate stem cell | 1.04e-12 | 427 |
somatic stem cell | 2.29e-12 | 433 |
stem cell | 5.96e-12 | 441 |
mesenchymal cell | 5.47e-10 | 354 |
hematopoietic oligopotent progenitor cell | 7.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.40e-10 | 161 |
connective tissue cell | 2.12e-09 | 361 |
hematopoietic cell | 9.98e-09 | 177 |
hematopoietic stem cell | 1.29e-08 | 168 |
vascular associated smooth muscle cell | 5.10e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 5.53e-08 | 120 |
motile cell | 5.35e-07 | 386 |
leukocyte | 8.70e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.84e-23 | 203 |
hematopoietic system | 7.26e-19 | 98 |
blood island | 7.26e-19 | 98 |
bone marrow | 5.52e-18 | 76 |
hemolymphoid system | 1.73e-17 | 108 |
bone element | 3.69e-16 | 82 |
skeletal element | 5.29e-16 | 90 |
mesoderm | 7.66e-16 | 315 |
mesoderm-derived structure | 7.66e-16 | 315 |
presumptive mesoderm | 7.66e-16 | 315 |
musculoskeletal system | 4.18e-14 | 167 |
immune system | 1.05e-13 | 93 |
skeletal system | 1.08e-13 | 100 |
connective tissue | 3.01e-08 | 371 |