FFCP PHASE1:Hg19::chr19:36631867..36631919,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36631867..36631919,+ to FFCP PHASE1:Hg19::chr19:36631867..36631919,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=826 | |EntrezGene=826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1481 | |HGNC=1481 | ||
|TSSclassifier=strong | |||
|UniProt=P04632 | |UniProt=P04632 | ||
|association_with_transcript=0bp_to_BT009775,CU680106_5end | |||
|cluster_id=chr19:36631867..36631919,+ | |||
|coexpression_cluster_id=C3654 | |||
|description=CAGE_peak_2_at_CAPNS1_5end | |||
|id=chr19:36631867..36631919,+ | |||
|ontology_enrichment_celltype=CL:0000012!4.83e-39!682;CL:0000548!2.68e-38!679;CL:0000004!2.68e-38!679;CL:0000255!2.68e-38!679;CL:0000144!7.57e-32!625;CL:0000222!3.44e-31!119;CL:0000003!3.36e-25!722;CL:0002371!3.96e-24!591;CL:0002321!7.72e-24!248;CL:0000220!4.10e-23!246;CL:0000183!1.41e-18!59;CL:0000066!3.53e-17!254;CL:0000393!7.33e-17!60;CL:0000211!7.33e-17!60;CL:0000187!3.42e-16!54;CL:0000192!5.07e-16!42;CL:0000514!5.07e-16!42;CL:0000680!1.56e-15!57;CL:0000056!1.56e-15!57;CL:0000355!1.56e-15!57;CL:0000055!1.35e-14!180;CL:0000213!2.26e-14!57;CL:0000215!2.26e-14!57;CL:0000359!3.60e-14!32;CL:0000063!9.35e-14!578;CL:0002078!4.84e-12!44;CL:0000115!7.38e-12!35;CL:0002139!1.16e-10!24;CL:0000076!3.83e-10!62;CL:0000071!1.38e-09!18;CL:0002546!1.38e-09!18;CL:1000449!1.19e-08!16;CL:0002681!3.56e-07!13;CL:0002584!3.56e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.94e-13;32!CL:0000192;1.58e-11;43!CL:0002139;1.07e-10;24!CL:0000115;1.27e-10;36!CL:0000071;1.19e-09;18!CL:1000449;3.06e-09;15!CL:0000213;4.40e-09;58!CL:0000215;4.40e-09;58!CL:0000187;4.56e-09;55!CL:0000393;8.46e-09;61!CL:0000211;8.46e-09;61!CL:0002078;1.28e-08;45!CL:0002681;9.12e-08;12!CL:0002584;9.12e-08;12!CL:1000497;4.61e-07;17!CL:0002518;4.61e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.79e-31,121;CL:0002321,3.43e-24,250;CL:0000066,2.87e-17,253;CL:0000393,1.58e-16,61;CL:0000211,1.58e-16,61;CL:0000187,7.68e-16,55;CL:0000192,1.37e-15,43;CL:0000514,1.37e-15,43;CL:0000680,3.28e-15,58;CL:0000056,3.28e-15,58;CL:0000355,3.28e-15,58;CL:0000213,6.60e-15,58;CL:0000215,6.60e-15,58;CL:0000359,3.60e-14,32;CL:0002078,1.41e-12,45;CL:0000115,2.03e-12,36;CL:0002139,1.16e-10,24;CL:0000076,2.09e-10,63;CL:0000071,1.38e-09,18;CL:0002546,1.38e-09,18;CL:1000449,2.97e-09,15;CL:0002681,8.90e-08,12;CL:0002584,8.90e-08,12;CL:1000497,5.01e-07,17;CL:0002518,5.01e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;1.58e-11;43!CL:0002546;1.19e-09;18!CL:0000222;2.21e-09;121!CL:0000355;2.07e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.07e-24!79;UBERON:0007798!9.07e-24!79;UBERON:0000055!1.44e-20!69;UBERON:0004872!6.21e-19!84;UBERON:0001981!1.39e-18!60;UBERON:0007500!1.39e-18!60;UBERON:0004537!1.39e-18!60;UBERON:0006965!1.39e-18!60;UBERON:0003914!2.30e-17!118;UBERON:0001637!2.78e-17!42;UBERON:0003509!2.78e-17!42;UBERON:0004572!2.78e-17!42;UBERON:0004535!2.32e-16!110;UBERON:0001009!1.57e-15!113;UBERON:0000490!6.40e-15!138;UBERON:0004290!3.83e-14!70;UBERON:0001134!1.07e-13!61;UBERON:0002036!1.07e-13!61;UBERON:0003082!1.07e-13!61;UBERON:0000486!1.47e-13!82;UBERON:0005256!3.01e-13!143;UBERON:0000914!3.39e-13!83;UBERON:0002329!3.39e-13!83;UBERON:0003077!3.39e-13!83;UBERON:0003059!3.39e-13!83;UBERON:0007282!3.39e-13!83;UBERON:0009618!3.39e-13!83;UBERON:0007285!3.39e-13!83;UBERON:0004573!4.77e-13!33;UBERON:0004571!4.77e-13!33;UBERON:0002385!3.47e-12!63;UBERON:0001015!3.47e-12!63;UBERON:0000383!3.47e-12!63;UBERON:0002100!5.90e-10!216;UBERON:0003104!9.95e-10!238;UBERON:0009142!9.95e-10!238;UBERON:0001986!1.38e-09!18;UBERON:0004638!1.38e-09!18;UBERON:0004852!1.38e-09!18;UBERON:0000926!5.48e-09!448;UBERON:0004120!5.48e-09!448;UBERON:0006603!5.48e-09!448;UBERON:0000487!7.37e-09!22;UBERON:0004211!1.19e-08!16;UBERON:0001285!1.19e-08!16;UBERON:0007684!1.19e-08!16;UBERON:0003220!1.19e-08!16;UBERON:0004208!1.19e-08!16;UBERON:0006555!1.36e-07!17;UBERON:0005103!1.36e-07!17;UBERON:0000083!1.36e-07!17;UBERON:0009201!1.36e-07!17;UBERON:0004819!1.36e-07!17;UBERON:0006553!1.36e-07!17;UBERON:0003074!1.36e-07!17;UBERON:0003060!1.36e-07!17;UBERON:0006914!2.22e-07!25;UBERON:0003081!2.97e-07!216;UBERON:0001225!3.56e-07!13;UBERON:0008987!3.56e-07!13;UBERON:0000947!4.42e-07!21;UBERON:0010191!4.42e-07!21;UBERON:0000353!4.80e-07!17;UBERON:0001851!7.44e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.00e-12;42!UBERON:0003509;2.00e-12;42!UBERON:0004572;2.00e-12;42!UBERON:0003914;2.43e-12;74!UBERON:0007500;3.16e-12;56!UBERON:0001981;3.16e-12;56!UBERON:0004537;3.16e-12;56!UBERON:0004573;6.55e-12;33!UBERON:0004571;6.55e-12;33!UBERON:0000055;6.52e-11;65!UBERON:0002049;1.57e-10;75!UBERON:0007798;1.57e-10;75!UBERON:0004638;1.19e-09;18!UBERON:0001986;1.19e-09;18!UBERON:0004852;1.19e-09;18!UBERON:0006555;3.06e-09;15!UBERON:0004819;3.06e-09;15!UBERON:0001285;3.06e-09;15!UBERON:0007684;3.06e-09;15!UBERON:0000487;5.45e-09;22!UBERON:0000490;7.58e-09;33!UBERON:0000025;2.80e-08;93!UBERON:0001225;9.12e-08;12!UBERON:0008987;9.12e-08;12!UBERON:0000353;1.11e-07;15!UBERON:0006914;2.08e-07;25!UBERON:0001851;2.81e-07;15!UBERON:0000947;4.48e-07;21!UBERON:0010191;4.48e-07;21 | |||
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| ||
|short_description=p2@CAPNS1 | |||
}} | }} |
Latest revision as of 15:50, 17 September 2015
Short description: | p2@CAPNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPNS1_5end |
Coexpression cluster: | C3654_Alveolar_Renal_Smooth_Fibroblast_Mesenchymal_Keratinocyte_Hair |
Association with transcript: | 0bp_to_BT009775, CU680106_5end |
EntrezGene: | CAPNS1 |
HGNC: | 1481 |
UniProt: | P04632 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.79e-31 | 121 |
embryonic cell | 3.43e-24 | 250 |
epithelial cell | 2.87e-17 | 253 |
electrically responsive cell | 1.58e-16 | 61 |
electrically active cell | 1.58e-16 | 61 |
muscle cell | 7.68e-16 | 55 |
smooth muscle cell | 1.37e-15 | 43 |
smooth muscle myoblast | 1.37e-15 | 43 |
muscle precursor cell | 3.28e-15 | 58 |
myoblast | 3.28e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.28e-15 | 58 |
lining cell | 6.60e-15 | 58 |
barrier cell | 6.60e-15 | 58 |
vascular associated smooth muscle cell | 3.60e-14 | 32 |
meso-epithelial cell | 1.41e-12 | 45 |
endothelial cell | 2.03e-12 | 36 |
endothelial cell of vascular tree | 1.16e-10 | 24 |
squamous epithelial cell | 2.09e-10 | 63 |
blood vessel endothelial cell | 1.38e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.38e-09 | 18 |
epithelial cell of nephron | 2.97e-09 | 15 |
kidney cortical cell | 8.90e-08 | 12 |
renal cortical epithelial cell | 8.90e-08 | 12 |
kidney cell | 5.01e-07 | 17 |
kidney epithelial cell | 5.01e-07 | 17 |