FFCP PHASE1:Hg19::chr19:49376669..49376682,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49376669..49376682,+ to FFCP PHASE1:Hg19::chr19:49376669..49376682,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23645 | |EntrezGene=23645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14375 | |HGNC=14375 | ||
|TSSclassifier=strong | |||
|UniProt=O75807 | |UniProt=O75807 | ||
|association_with_transcript=178bp_to_CR457259_5end | |||
|cluster_id=chr19:49376669..49376682,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_PPP1R15A_5end | |||
|id=chr19:49376669..49376682,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.93e-28!42;CL:0000860!1.39e-27!45;CL:0000766!3.19e-23!76;CL:0000839!1.60e-19!70;CL:0000557!5.67e-19!71;CL:0002009!1.95e-18!65;CL:0000738!9.80e-18!140;CL:0002194!2.60e-17!63;CL:0000576!2.60e-17!63;CL:0000040!2.60e-17!63;CL:0000559!2.60e-17!63;CL:0002031!6.27e-16!124;CL:0000763!5.24e-14!112;CL:0000049!5.24e-14!112;CL:0002087!1.44e-13!119;CL:0002032!1.27e-12!165;CL:0000837!1.27e-12!165;CL:0000037!7.37e-12!172;CL:0000566!7.37e-12!172;CL:0000988!7.26e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-49;33!CL:0002057;2.92e-49;33!CL:0000473;3.49e-33;39!CL:0000234;3.49e-33;39!CL:0000576;1.28e-32;48!CL:0000766;5.00e-25;69!CL:0002087;3.02e-14;104!CL:0000094;4.59e-14;8!CL:0000763;2.71e-12;100!CL:0002393;9.17e-11;6!CL:0002397;9.17e-11;6!CL:0000738;9.18e-11;136!CL:0000081;9.30e-10;11!CL:0000988;9.99e-08;177!CL:0000219;8.87e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.40e-61,42;CL:0002057,3.40e-61,42;CL:0000766,1.87e-55,72;CL:0000473,7.43e-52,48;CL:0000234,7.43e-52,48;CL:0000738,2.56e-50,136;CL:0000839,5.98e-46,66;CL:0000557,1.97e-45,67;CL:0002031,6.70e-44,120;CL:0002009,7.44e-44,61;CL:0002194,5.98e-41,59;CL:0000576,5.98e-41,59;CL:0000040,5.98e-41,59;CL:0000559,5.98e-41,59;CL:0000037,9.68e-41,168;CL:0002032,2.30e-40,161;CL:0000837,2.30e-40,161;CL:0000763,1.50e-39,108;CL:0000049,1.50e-39,108;CL:0000988,8.75e-39,177;CL:0002087,4.64e-38,115;CL:0000134,1.32e-20,354;CL:0002320,9.74e-20,361;CL:0000219,1.06e-16,386;CL:0000034,8.21e-15,441;CL:0000048,9.17e-15,427;CL:0000094,2.69e-14,8;CL:0000723,3.17e-14,433;CL:0000081,6.41e-10,11;CL:0002393,6.80e-09,9;CL:0002397,6.80e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-44;42!CL:0000049;2.09e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.55e-18!80;UBERON:0002390!3.19e-17!102;UBERON:0003061!3.19e-17!102;UBERON:0001474!1.23e-16!86;UBERON:0004765!1.33e-14!101;UBERON:0001434!1.33e-14!101;UBERON:0002193!3.51e-14!112;UBERON:0002405!7.14e-10!115;UBERON:0003081!3.58e-07!216;UBERON:0002204!4.47e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.97e-42,76;UBERON:0001474,6.97e-38,82;UBERON:0002390,2.64e-37,98;UBERON:0003061,2.64e-37,98;UBERON:0004765,3.21e-33,90;UBERON:0002193,2.23e-32,108;UBERON:0002405,1.11e-31,93;UBERON:0001434,1.87e-28,100;UBERON:0002384,1.47e-18,371;UBERON:0003081,2.42e-17,203;UBERON:0002204,5.42e-13,167;UBERON:0000926,7.48e-08,315;UBERON:0004120,7.48e-08,315;UBERON:0006603,7.48e-08,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0,0.975865597581014,0,0.204000691244253,0,0,0.136874425072884,0.376627918784408,0.0764134057479513,0.164201178899891,0.0787107813136792,3.54027849164014,2.68680578668049,2.16742572642506,0,0.30120591877825,1.10926203050036,0,0.142169232487422,0,2.76997704265939,13.8375668754398,7.59538047505481,0,0.32389366601898,0,2.03557534291391,3.02300754951048,2.66842467306598,8.83230340241602,8.22335776043652,7.12324653058738,14.0969272237854,11.7833925003386,14.8983804829809,14.8240642716746,20.6555098746824,33.8566216485854,4.89430082810772,5.18521685109907,6.06753408001728,27.2414664210103,15.4045932996525,26.8521592835597,1.31940520074686,3.19141852194611,1.70489900213078,14.8006711700578,11.3477044938228,29.272645702792,8.79370328398601,8.86520961314342,11.5110087693712,15.1349875658342,16.2042159834528,14.8737322097216,2.32380814943136,2.76385589954557,1.04829322754188,0.561643155732475,1.35159203557356,1.12507910687956,0.855038231223746,0.79566670879636,1.0959849225878,1.75996244461323,0,0,0,0.400395987036012,0,0,0,2.84606484554724,5.28513470433845,4.20500550937752,2.64342657158052,1.68152568894461,0.263384084775077,1.7703879310245,6.28817220398664,4.5232329779892,0,0.32592226663359,0.473447805734733,0,0.222820913770347,2.65145316727353,0.886135578334485,1.35401931882508,0.25618263945135,0.260118695119756,0,0.276350017785848,0.289803085735052,1.4828656316206,1.07016331235885,0,0,0.766440987203842,1.37450978193052,1.77113784413652,0,0,0,0,0.255973222308837,0,0,0,2.21767417547206,7.48832548193821,3.33096128930438,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0.175669571386252,0.327447688744282,0,0.370784442784429,0,0,0.398873881556595,1.43094374583205,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.366403487860815,3.9534125230819,7.75560528296651,0,0,0.506522046658319,0.132409180813219,0.286836620748814,0.709336764396714,1.68203280042692,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.70296429550139,0.312160076830321,0,0,0.352303495931295,0,0.280901613404497,0,0.245668634623536,0.103325781175765,0,1.23633464639278,0,0,0,0.750711119231785,0,0,0.30648779579902,0.600952235626387,0.113432183160021,0.717558542755448,0,0,0,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0,2.28065813717227,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0.858486162094873,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.447792613514241,0.871901815541886,0,0.492663237895943,0,3.31724984865235,1.8735593944205,3.91351543621778,0.063497894292169,0,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0.336393253036082,0,0.07333828582095,0.129271715757778,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,3.54655368363469,6.03757209606648,3.7219480521127,0.254094624222463,0,0,0,1.27587750330633,3.74503511973591,14.9580729602012,1.65766205374414,0.24538298343828,0,0.271265023699736,0,1.42743191037729,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,7.54999702865159,1.81436848265855,1.21251028578504,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0.512556597022804,0,0,0,0,0,0,0.519254429183621,0.348631135379878,0.120859449591622,0,1.38121483403844,0.114814448164607,1.0925470080403,0.131124414959424,0,0.15403067420883,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,0,0,1.00337954770971,0,0,0,1.31555925987561,1.8300481571743,0,0,0,0.824328093181778,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0,0,0.340906509664404,0,0.661139661443912,0.384380134730212,0.255225424989168,0.6069466851333,0,0,0,0.616067160352178,0,0,0,1.00187420719394,0,0,0,0.511795582622668,0.42793898803392,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.409499734223957,0.424216295861138,0,0,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,0.7133421029625,0.709522128141196,0.422215270595328,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0.941438007767792,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,1.08006287447623,1.58625035258854,0.106824071127473,0,0.490080431962063,0.185803175125719,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0,0,0,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| ||
|short_description=p7@PPP1R15A | |||
}} | }} |
Latest revision as of 04:30, 19 September 2015
Short description: | p7@PPP1R15A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPP1R15A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 178bp_to_CR457259_5end |
EntrezGene: | PPP1R15A |
HGNC: | 14375 |
UniProt: | O75807 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.97e-42 | 76 |
bone element | 6.97e-38 | 82 |
hematopoietic system | 2.64e-37 | 98 |
blood island | 2.64e-37 | 98 |
skeletal element | 3.21e-33 | 90 |
hemolymphoid system | 2.23e-32 | 108 |
immune system | 1.11e-31 | 93 |
skeletal system | 1.87e-28 | 100 |
connective tissue | 1.47e-18 | 371 |
lateral plate mesoderm | 2.42e-17 | 203 |
musculoskeletal system | 5.42e-13 | 167 |
mesoderm | 7.48e-08 | 315 |
mesoderm-derived structure | 7.48e-08 | 315 |
presumptive mesoderm | 7.48e-08 | 315 |