FFCP PHASE1:Hg19::chr1:151762900..151762910,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:151762900..151762910,- to FFCP PHASE1:Hg19::chr1:151762900..151762910,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11022 | |EntrezGene=11022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11713 | |HGNC=11713 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJ68,B7ZAG4,E9PQX4 | |UniProt=B4DJ68,B7ZAG4,E9PQX4 | ||
|association_with_transcript=0bp_to_ENST00000440583,ENST00000526413,ENST00000530202_5end | |||
|cluster_id=chr1:151762900..151762910,- | |||
|description=CAGE_peak_2_at_TDRKH_5end | |||
|id=chr1:151762900..151762910,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.04e-17!94;UBERON:0001016!1.04e-17!94;UBERON:0005743!4.98e-17!86;UBERON:0001017!6.01e-17!82;UBERON:0000955!6.34e-17!69;UBERON:0006238!6.34e-17!69;UBERON:0002616!8.43e-15!59;UBERON:0001049!5.12e-14!57;UBERON:0005068!5.12e-14!57;UBERON:0006241!5.12e-14!57;UBERON:0007135!5.12e-14!57;UBERON:0002780!1.92e-13!41;UBERON:0001890!1.92e-13!41;UBERON:0006240!1.92e-13!41;UBERON:0003080!7.34e-13!42;UBERON:0002020!1.44e-12!34;UBERON:0003528!1.44e-12!34;UBERON:0001893!1.69e-12!34;UBERON:0004121!2.12e-12!169;UBERON:0002791!8.13e-12!33;UBERON:0000924!1.49e-11!173;UBERON:0006601!1.49e-11!173;UBERON:0001869!1.80e-11!32;UBERON:0003075!2.48e-11!86;UBERON:0007284!2.48e-11!86;UBERON:0007023!4.25e-11!115;UBERON:0000153!3.53e-10!129;UBERON:0007811!3.53e-10!129;UBERON:0002346!3.86e-10!90;UBERON:0003056!1.29e-09!61;UBERON:0000033!3.34e-09!123;UBERON:0002619!3.62e-09!22;UBERON:0000956!5.64e-09!25;UBERON:0000203!5.64e-09!25;UBERON:0001950!7.06e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.84e-12;3!UBERON:0002336;1.25e-09;1!UBERON:0011215;1.25e-09;1!UBERON:0001018;1.25e-09;1!UBERON:0002473;1.25e-09;1!UBERON:0005340;1.25e-09;1!UBERON:0003544;1.25e-09;1!UBERON:0005970;1.25e-09;1!UBERON:0002316;1.25e-09;1!UBERON:0001020;1.25e-09;1!UBERON:0002437;1.25e-09;1!UBERON:0002784;3.16e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,3.57e-12,3;UBERON:0002336,1.76e-09,1;UBERON:0011215,1.76e-09,1;UBERON:0001018,1.76e-09,1;UBERON:0002473,1.76e-09,1;UBERON:0005340,1.76e-09,1;UBERON:0003544,1.76e-09,1;UBERON:0005970,1.76e-09,1;UBERON:0002316,1.76e-09,1;UBERON:0001020,1.76e-09,1;UBERON:0002437,1.76e-09,1;UBERON:0002784,3.04e-09,4;UBERON:0000073,8.33e-09,53;UBERON:0002616,8.33e-09,53;UBERON:0001049,2.75e-08,56;UBERON:0005068,2.75e-08,56;UBERON:0006241,2.75e-08,56;UBERON:0007135,2.75e-08,56;UBERON:0001017,8.75e-07,81 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0.568676929949686,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0.296573126324121,0,1.04535523804977,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0,1.24930726552346,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,1.76821751921912,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0.858486162094873,0.492434012174795,0,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0,0.492663237895943,1.23267807618516,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0.224170287987055,0,0.431255149719035,0.128343036279748,0,0,0,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0.512900250232778,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0.322260734604821,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0.714695326373367,0,0,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0.371606350251437,0,0.569134746787313,0.318852545457645,0,0,0.423347165447766,0,0.561594356226918,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0.780103689942349,0,0,0,0,1.9882952955326,0.422008249231538,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0.503865495708552,0.20453736500431,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0,0,0,0.969332746095218,0.463840490809256,0,0.260427761085233,0.962059999958153,0,0.1137934482855,0.508507300585533,0.709163045303809,0.689486746482929,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0.760531603454056,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,0.37950746544837,0.158936578980379,1.68798451622422,0.163232808159148,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0.889563386041866,1.23563938946503,1.56632924258183,1.07841812769083,0,0.468528891450678,0,0.391329237864179,0.242780379534093,0,0,0.61214552326098,0,0.300646838828985,0.207376382794494,0,0,0,0,0.569219092059585,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.316553979779393,0.195551382734803,0.561111741760736,0,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0.209205692624666,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0.202210631562555,0.0984274815147488,0,0.795229689809303,0.408610218334727,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0.303747783290123,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,1.16354660725395,0.92562821219883,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,0.365377795142688,0,0.544017803369474,0,0,0.327872630709804,0,0,0.366078794705889,0.250381861413,0.573409195690071,0.554645257684261,0.745156835296601,0.138348634936231,0,0.303298235083296,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0.999936979274649,0,0,0,0.184105950251841,0,0,0.383683113910955,0.970423302570136,0.629063767423586,0,0,0,0,0,0,0.0788617450012534,0,0.3526759436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| ||
|short_description=p2@TDRKH | |||
}} | }} |
Latest revision as of 01:36, 17 September 2015
Short description: | p2@TDRKH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TDRKH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000440583, ENST00000526413, ENST00000530202_5end |
EntrezGene: | TDRKH |
HGNC: | 11713 |
UniProt: | B4DJ68B7ZAG4E9PQX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 3.57e-12 | 3 |
corpus callosum | 1.76e-09 | 1 |
central nervous system cell part cluster | 1.76e-09 | 1 |
axon tract | 1.76e-09 | 1 |
intercerebral commissure | 1.76e-09 | 1 |
dorsal telencephalic commissure | 1.76e-09 | 1 |
brain white matter | 1.76e-09 | 1 |
brain commissure | 1.76e-09 | 1 |
white matter | 1.76e-09 | 1 |
nervous system commissure | 1.76e-09 | 1 |
cerebral hemisphere white matter | 1.76e-09 | 1 |
regional part of diencephalon | 3.04e-09 | 4 |
regional part of nervous system | 8.33e-09 | 53 |
regional part of brain | 8.33e-09 | 53 |
neural tube | 2.75e-08 | 56 |
neural rod | 2.75e-08 | 56 |
future spinal cord | 2.75e-08 | 56 |
neural keel | 2.75e-08 | 56 |
central nervous system | 8.75e-07 | 81 |