FFCP PHASE1:Hg19::chr1:151812394..151812405,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:151812394..151812405,+ to FFCP PHASE1:Hg19::chr1:151812394..151812405,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:151812394..151812405,+ | |||
|description=CAGE_peak_at_chr1:151812394..151812405,+ | |||
|id=chr1:151812394..151812405,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.20e-11;1 | |||
|ontology_enrichment_disease=DOID:305!9.51e-14!106;DOID:0050687!4.42e-10!143;DOID:299!5.69e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;7.17e-20;2!DOID:299;3.38e-13;25!DOID:3111;8.20e-11;1!DOID:3603;8.20e-11;1!DOID:5093;2.05e-10;4!DOID:1612;2.05e-10;4!DOID:3908;1.66e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.55e-19,2;DOID:299,3.46e-13,25;DOID:305,4.33e-13,106;DOID:5093,1.47e-10,4;DOID:1612,1.47e-10,4;DOID:3111,1.61e-10,1;DOID:3603,1.61e-10,1;DOID:0050687,3.69e-09,143;DOID:3908,2.16e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.97e-13!57;UBERON:0005068!4.97e-13!57;UBERON:0006241!4.97e-13!57;UBERON:0007135!4.97e-13!57;UBERON:0007023!1.42e-11!115;UBERON:0002616!2.58e-10!59;UBERON:0002780!1.98e-09!41;UBERON:0001890!1.98e-09!41;UBERON:0006240!1.98e-09!41;UBERON:0003080!4.61e-09!42;UBERON:0001017!5.06e-09!82;UBERON:0005743!8.68e-09!86;UBERON:0003075!1.08e-08!86;UBERON:0007284!1.08e-08!86;UBERON:0001893!1.29e-08!34;UBERON:0002020!1.77e-08!34;UBERON:0003528!1.77e-08!34;UBERON:0000955!2.87e-08!69;UBERON:0006238!2.87e-08!69;UBERON:0002791!5.46e-08!33;UBERON:0002346!6.71e-08!90;UBERON:0000073!7.97e-08!94;UBERON:0001016!7.97e-08!94;UBERON:0001869!2.93e-07!32;UBERON:0002298!3.46e-07!8;UBERON:0002294!4.51e-07!7;UBERON:0001173!4.51e-07!7;UBERON:0004912!4.51e-07!7;UBERON:0003056!8.22e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;7.17e-20;2!UBERON:0000122;7.17e-20;2!UBERON:0002294;9.48e-13;7!UBERON:0001173;9.48e-13;7!UBERON:0002336;8.20e-11;1!UBERON:0000941;8.20e-11;1!UBERON:0004913;8.20e-11;1!UBERON:0001785;8.20e-11;1!UBERON:0002464;8.20e-11;1!UBERON:0004904;8.20e-11;1!UBERON:0011215;8.20e-11;1!UBERON:0001018;8.20e-11;1!UBERON:0003703;8.20e-11;1!UBERON:0001021;8.20e-11;1!UBERON:0002473;8.20e-11;1!UBERON:0005340;8.20e-11;1!UBERON:0003544;8.20e-11;1!UBERON:0005970;8.20e-11;1!UBERON:0002316;8.20e-11;1!UBERON:0001020;8.20e-11;1!UBERON:0002437;8.20e-11;1!UBERON:0001174;8.20e-11;1!UBERON:0004914;8.20e-11;1!UBERON:0002394;2.05e-10;4!UBERON:0003928;2.05e-10;4!UBERON:0000058;4.37e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,7.92e-20,2;UBERON:0000122,7.92e-20,2;UBERON:0004913,4.15e-11,1;UBERON:0003703,4.15e-11,1;UBERON:0001174,4.15e-11,1;UBERON:0004914,4.15e-11,1;UBERON:0000941,8.22e-11,1;UBERON:0001785,8.22e-11,1;UBERON:0002464,8.22e-11,1;UBERON:0004904,8.22e-11,1;UBERON:0001021,8.22e-11,1;UBERON:0003902,8.22e-11,1;UBERON:0005425,8.22e-11,1;UBERON:0002336,9.05e-11,1;UBERON:0011215,9.05e-11,1;UBERON:0001018,9.05e-11,1;UBERON:0002473,9.05e-11,1;UBERON:0005340,9.05e-11,1;UBERON:0003544,9.05e-11,1;UBERON:0005970,9.05e-11,1;UBERON:0002316,9.05e-11,1;UBERON:0001020,9.05e-11,1;UBERON:0002437,9.05e-11,1;UBERON:0002294,2.53e-10,9;UBERON:0001173,2.53e-10,9;UBERON:0004912,2.53e-10,9;UBERON:0002394,1.96e-07,6;UBERON:0003928,1.96e-07,6 | |||
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| ||
|short_description=p@chr1:151812394..151812405,+ | |||
}} | }} |
Latest revision as of 21:27, 27 July 2015
Short description: | p@chr1:151812394..151812405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:151812394..151812405, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 7.92e-20 | 2 |
neuron projection bundle | 7.92e-20 | 2 |
hepatopancreatic ampulla | 4.15e-11 | 1 |
extrahepatic bile duct | 4.15e-11 | 1 |
common bile duct | 4.15e-11 | 1 |
duodenal papilla | 4.15e-11 | 1 |
cranial nerve II | 8.22e-11 | 1 |
cranial nerve | 8.22e-11 | 1 |
nerve trunk | 8.22e-11 | 1 |
nerve connecting eye with brain | 8.22e-11 | 1 |
nerve | 8.22e-11 | 1 |
retinal neural layer | 8.22e-11 | 1 |
presumptive neural retina | 8.22e-11 | 1 |
corpus callosum | 9.05e-11 | 1 |
central nervous system cell part cluster | 9.05e-11 | 1 |
axon tract | 9.05e-11 | 1 |
intercerebral commissure | 9.05e-11 | 1 |
dorsal telencephalic commissure | 9.05e-11 | 1 |
brain white matter | 9.05e-11 | 1 |
brain commissure | 9.05e-11 | 1 |
white matter | 9.05e-11 | 1 |
nervous system commissure | 9.05e-11 | 1 |
cerebral hemisphere white matter | 9.05e-11 | 1 |
biliary system | 2.53e-10 | 9 |
biliary tree | 2.53e-10 | 9 |
biliary bud | 2.53e-10 | 9 |
bile duct | 1.96e-07 | 6 |
digestive system duct | 1.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.55e-19 | 2 |
adenocarcinoma | 3.46e-13 | 25 |
carcinoma | 4.33e-13 | 106 |
thoracic cancer | 1.47e-10 | 4 |
breast cancer | 1.47e-10 | 4 |
cystadenocarcinoma | 1.61e-10 | 1 |
mucinous cystadenocarcinoma | 1.61e-10 | 1 |
cell type cancer | 3.69e-09 | 143 |
non-small cell lung carcinoma | 2.16e-08 | 5 |