FFCP PHASE1:Hg19::chr1:158815524..158815535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4332 | |EntrezGene=4332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |HGNC=7183 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-155bp_to_ENST00000438394_5end | |||
|cluster_id=chr1:158815524..158815535,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_7_at_MNDA_5end | |||
|id=chr1:158815524..158815535,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.86e-73!76;CL:0002194!1.73e-72!63;CL:0000576!1.73e-72!63;CL:0000040!1.73e-72!63;CL:0000559!1.73e-72!63;CL:0002009!7.62e-70!65;CL:0000839!6.92e-64!70;CL:0000557!8.55e-63!71;CL:0000763!1.16e-57!112;CL:0000049!1.16e-57!112;CL:0002057!1.42e-57!42;CL:0000860!5.31e-53!45;CL:0000738!6.32e-53!140;CL:0002087!2.69e-49!119;CL:0000037!1.44e-46!172;CL:0000566!1.44e-46!172;CL:0002032!6.23e-46!165;CL:0000837!6.23e-46!165;CL:0000988!5.29e-43!182;CL:0002031!2.81e-41!124;CL:0000134!4.78e-13!358;CL:0002320!1.82e-12!365;CL:0000219!1.94e-10!390;CL:0000775!1.23e-08!3;CL:0002393!3.58e-08!9;CL:0002397!3.58e-08!9;CL:0000048!4.65e-08!430;CL:0000094!5.30e-08!8;CL:0000235!8.05e-08!10;CL:0000723!1.00e-07!436;CL:0000034!2.67e-07!444;CL:0002619!5.95e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-41;33!CL:0002057;1.54e-41;33!CL:0000473;2.02e-40;39!CL:0000234;2.02e-40;39!CL:0000576;2.98e-26;48!CL:0000766;1.44e-25;69!CL:0000775;4.23e-17;3!CL:0000094;8.12e-17;8!CL:0000763;9.14e-15;100!CL:0000081;3.75e-12;11!CL:0000771;1.01e-11;2!CL:0000738;1.13e-08;136!CL:0000235;2.25e-08;6!CL:0000988;1.76e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.51e-52,72;CL:0000473,7.37e-50,48;CL:0000234,7.37e-50,48;CL:0000860,9.61e-43,42;CL:0002057,9.61e-43,42;CL:0002194,1.90e-42,59;CL:0000576,1.90e-42,59;CL:0000040,1.90e-42,59;CL:0000559,1.90e-42,59;CL:0000763,5.33e-41,108;CL:0000049,5.33e-41,108;CL:0002009,6.63e-41,61;CL:0000839,1.88e-37,66;CL:0000557,8.02e-37,67;CL:0000738,8.17e-27,136;CL:0000037,7.10e-26,168;CL:0002032,2.08e-25,161;CL:0000837,2.08e-25,161;CL:0000988,3.19e-24,177;CL:0002087,3.06e-21,115;CL:0002031,2.38e-18,120;CL:0000775,4.24e-17,3;CL:0000094,7.63e-17,8;CL:0000081,3.59e-12,11;CL:0000771,9.08e-12,2;CL:0000134,9.98e-09,354;CL:0002320,2.00e-08,361;CL:0000235,2.25e-08,6;CL:0000219,2.30e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.37e-31;42!CL:0000049;1.62e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-64!102;UBERON:0003061!1.53e-64!102;UBERON:0002193!2.58e-57!112;UBERON:0002371!3.47e-54!80;UBERON:0001474!1.92e-49!86;UBERON:0004765!4.81e-40!101;UBERON:0001434!4.81e-40!101;UBERON:0002405!5.03e-35!115;UBERON:0003081!7.44e-23!216;UBERON:0002204!7.51e-19!167;UBERON:0000178!7.29e-14!15;UBERON:0000179!7.29e-14!15;UBERON:0000463!7.29e-14!15;UBERON:0002384!1.12e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-20;15!UBERON:0000179;2.34e-20;15!UBERON:0000463;2.34e-20;15!UBERON:0002390;1.12e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.68e-45,98;UBERON:0003061,3.68e-45,98;UBERON:0002193,2.06e-40,108;UBERON:0002371,6.84e-32,76;UBERON:0001474,3.38e-29,82;UBERON:0004765,3.69e-26,90;UBERON:0002405,3.74e-25,93;UBERON:0001434,4.87e-23,100;UBERON:0000178,2.14e-20,15;UBERON:0000179,2.14e-20,15;UBERON:0000463,2.14e-20,15;UBERON:0003081,1.70e-18,203;UBERON:0002204,9.67e-12,167;UBERON:0000926,1.44e-09,315;UBERON:0004120,1.44e-09,315;UBERON:0006603,1.44e-09,315;UBERON:0002384,5.15e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,1.30206522429511,0.447830948479849,0.647787332037959,0.257575567634187,2.4717700592526,0.377875943688809,0.485168122375632,1.16214518452842,1.6446715520873,0.309706370895104,2.58923153089935,2.56160706529101,0.709446689665756,1.03423704220986,0.645484683583826,0,1.69418105588344,0,0,1.83650335422542,0.320929027076094,0,0.659702600373432,3.78980949481101,2.13112375266347,2.61188314765726,0.56738522469114,1.24564449799115,2.76373531782418,2.08593167368081,0.868755378820466,1.81619850790011,0.368277635987565,0.632924774881769,1.26753171787165,0.212604299965044,0.419317291016752,3.48218756554135,1.80212271409808,3.53596290733576,0,0.99458338599545,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,1.06366368415092,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.51128545716063,14.7583757638122,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,44.1914144128838,80.7735939850867,9.94597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,4.5571774973933,1.90585420366231,3.29089818468955,1.94541993357815,3.24018862342869,3.96562588147135,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,2.0368386450493,0,0,0,0.201799707191048,0,2.06103206853459,0.921722292925374,0,0.333698283423817,4.10315000344285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 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| ||
|short_description=p7@MNDA | |||
}} | }} |
Latest revision as of 21:46, 17 September 2015
Short description: | p7@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MNDA_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -155bp_to_ENST00000438394_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.51e-52 | 72 |
defensive cell | 7.37e-50 | 48 |
phagocyte | 7.37e-50 | 48 |
classical monocyte | 9.61e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.61e-43 | 42 |
monopoietic cell | 1.90e-42 | 59 |
monocyte | 1.90e-42 | 59 |
monoblast | 1.90e-42 | 59 |
promonocyte | 1.90e-42 | 59 |
myeloid cell | 5.33e-41 | 108 |
common myeloid progenitor | 5.33e-41 | 108 |
macrophage dendritic cell progenitor | 6.63e-41 | 61 |
myeloid lineage restricted progenitor cell | 1.88e-37 | 66 |
granulocyte monocyte progenitor cell | 8.02e-37 | 67 |
leukocyte | 8.17e-27 | 136 |
hematopoietic stem cell | 7.10e-26 | 168 |
hematopoietic oligopotent progenitor cell | 2.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-25 | 161 |
hematopoietic cell | 3.19e-24 | 177 |
nongranular leukocyte | 3.06e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 2.38e-18 | 120 |
neutrophil | 4.24e-17 | 3 |
granulocyte | 7.63e-17 | 8 |
blood cell | 3.59e-12 | 11 |
eosinophil | 9.08e-12 | 2 |
mesenchymal cell | 9.98e-09 | 354 |
connective tissue cell | 2.00e-08 | 361 |
macrophage | 2.25e-08 | 6 |
motile cell | 2.30e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.68e-45 | 98 |
blood island | 3.68e-45 | 98 |
hemolymphoid system | 2.06e-40 | 108 |
bone marrow | 6.84e-32 | 76 |
bone element | 3.38e-29 | 82 |
skeletal element | 3.69e-26 | 90 |
immune system | 3.74e-25 | 93 |
skeletal system | 4.87e-23 | 100 |
blood | 2.14e-20 | 15 |
haemolymphatic fluid | 2.14e-20 | 15 |
organism substance | 2.14e-20 | 15 |
lateral plate mesoderm | 1.70e-18 | 203 |
musculoskeletal system | 9.67e-12 | 167 |
mesoderm | 1.44e-09 | 315 |
mesoderm-derived structure | 1.44e-09 | 315 |
presumptive mesoderm | 1.44e-09 | 315 |
connective tissue | 5.15e-08 | 371 |