FFCP PHASE1:Hg19::chr1:165738056..165738067,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:165738056..165738067,- to FFCP PHASE1:Hg19::chr1:165738056..165738067,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54499 | |EntrezGene=54499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18188 | |HGNC=18188 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000481278_5end | |||
|cluster_id=chr1:165738056..165738067,- | |||
|description=CAGE_peak_2_at_TMCO1_5end | |||
|id=chr1:165738056..165738067,- | |||
|ontology_enrichment_celltype=CL:0000037!1.78e-23!172;CL:0000566!1.78e-23!172;CL:0002032!1.10e-22!165;CL:0000837!1.10e-22!165;CL:0000988!8.27e-22!182;CL:0000738!3.74e-18!140;CL:0002031!1.79e-17!124;CL:0002087!7.12e-17!119;CL:0000763!1.68e-13!112;CL:0000049!1.68e-13!112;CL:0000134!7.04e-10!358;CL:0000219!1.40e-09!390;CL:0000766!1.51e-09!76;CL:0000839!2.72e-09!70;CL:0002009!2.90e-09!65;CL:0000542!3.82e-09!53;CL:0000051!3.82e-09!53;CL:0002194!4.09e-09!63;CL:0000576!4.09e-09!63;CL:0000040!4.09e-09!63;CL:0000559!4.09e-09!63;CL:0002320!5.15e-09!365;CL:0000557!6.94e-09!71;CL:0000838!1.16e-08!52;CL:0000034!5.63e-07!444 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.23e-23,168;CL:0002032,7.50e-23,161;CL:0000837,7.50e-23,161;CL:0000988,1.87e-22,177;CL:0000738,3.23e-18,136;CL:0002031,1.44e-17,120;CL:0002087,5.65e-17,115;CL:0000763,1.18e-13,108;CL:0000049,1.18e-13,108;CL:0000134,3.53e-10,354;CL:0000219,6.93e-10,386;CL:0000766,1.27e-09,72;CL:0000839,2.19e-09,66;CL:0002009,2.22e-09,61;CL:0002320,2.87e-09,361;CL:0002194,3.10e-09,59;CL:0000576,3.10e-09,59;CL:0000040,3.10e-09,59;CL:0000559,3.10e-09,59;CL:0000542,3.71e-09,53;CL:0000051,3.71e-09,53;CL:0000557,5.25e-09,67;CL:0000838,1.12e-08,52;CL:0000034,6.17e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.95e-12!51;DOID:0060083!5.95e-12!51;DOID:1240!2.07e-10!39;DOID:8692!1.26e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.98e-09;39!DOID:2531;9.62e-08;51!DOID:0060083;9.62e-08;51!DOID:8692;1.11e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.50e-12,51;DOID:0060083,5.50e-12,51;DOID:1240,1.72e-10,39;DOID:8692,1.07e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.86e-11!102;UBERON:0003061!4.86e-11!102;UBERON:0002193!7.25e-10!112;UBERON:0002405!5.63e-09!115;UBERON:0002371!1.50e-08!80;UBERON:0002384!3.82e-08!375;UBERON:0001474!9.63e-08!86;UBERON:0004765!6.91e-07!101;UBERON:0001434!6.91e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.97e-11,98;UBERON:0003061,3.97e-11,98;UBERON:0002193,6.05e-10,108;UBERON:0002405,6.76e-09,93;UBERON:0002371,1.23e-08,76;UBERON:0002384,2.28e-08,371;UBERON:0001474,8.16e-08,82;UBERON:0004765,8.67e-08,90;UBERON:0001434,9.81e-07,100 | |||
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| ||
|short_description=p2@TMCO1 | |||
}} | }} |
Latest revision as of 10:12, 18 September 2015
Short description: | p2@TMCO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMCO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000481278_5end |
EntrezGene: | TMCO1 |
HGNC: | 18188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.23e-23 | 168 |
hematopoietic oligopotent progenitor cell | 7.50e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.50e-23 | 161 |
hematopoietic cell | 1.87e-22 | 177 |
leukocyte | 3.23e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.44e-17 | 120 |
nongranular leukocyte | 5.65e-17 | 115 |
myeloid cell | 1.18e-13 | 108 |
common myeloid progenitor | 1.18e-13 | 108 |
mesenchymal cell | 3.53e-10 | 354 |
motile cell | 6.93e-10 | 386 |
myeloid leukocyte | 1.27e-09 | 72 |
myeloid lineage restricted progenitor cell | 2.19e-09 | 66 |
macrophage dendritic cell progenitor | 2.22e-09 | 61 |
connective tissue cell | 2.87e-09 | 361 |
monopoietic cell | 3.10e-09 | 59 |
monocyte | 3.10e-09 | 59 |
monoblast | 3.10e-09 | 59 |
promonocyte | 3.10e-09 | 59 |
lymphocyte | 3.71e-09 | 53 |
common lymphoid progenitor | 3.71e-09 | 53 |
granulocyte monocyte progenitor cell | 5.25e-09 | 67 |
lymphoid lineage restricted progenitor cell | 1.12e-08 | 52 |
stem cell | 6.17e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.97e-11 | 98 |
blood island | 3.97e-11 | 98 |
hemolymphoid system | 6.05e-10 | 108 |
immune system | 6.76e-09 | 93 |
bone marrow | 1.23e-08 | 76 |
connective tissue | 2.28e-08 | 371 |
bone element | 8.16e-08 | 82 |
skeletal element | 8.67e-08 | 90 |
skeletal system | 9.81e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.50e-12 | 51 |
immune system cancer | 5.50e-12 | 51 |
leukemia | 1.72e-10 | 39 |
myeloid leukemia | 1.07e-07 | 31 |