FFCP PHASE1:Hg19::chr20:31097722..31097734,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_AK097865_5end | |||
|cluster_id=chr20:31097722..31097734,+ | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_2_at_AK097865_5end | |||
|id=chr20:31097722..31097734,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.73e-36!18;CL:0000789!7.73e-36!18;CL:0002420!7.73e-36!18;CL:0002419!7.73e-36!18;CL:0000790!7.73e-36!18;CL:0000084!3.93e-32!25;CL:0000827!3.93e-32!25;CL:0000625!3.11e-31!11;CL:0000838!6.68e-24!52;CL:0000542!2.39e-23!53;CL:0000051!2.39e-23!53;CL:0002087!1.70e-11!119;CL:0000842!7.57e-11!3;CL:0000623!1.64e-10!3;CL:0000825!1.64e-10!3;CL:0000738!7.06e-10!140;CL:0000624!1.85e-09!6;CL:0000224!3.07e-08!4;CL:0002031!8.07e-08!124;CL:0000037!1.10e-07!172;CL:0000566!1.10e-07!172;CL:0000988!6.16e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.41e-36;18!CL:0000789;2.41e-36;18!CL:0002419;2.41e-36;18!CL:0000625;4.17e-34;11!CL:0000084;5.97e-26;25!CL:0000624;7.32e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.43e-36,18;CL:0000789,3.43e-36,18;CL:0002420,3.43e-36,18;CL:0002419,3.43e-36,18;CL:0000790,3.43e-36,18;CL:0000625,5.11e-34,11;CL:0000084,7.68e-26,25;CL:0000827,7.68e-26,25;CL:0000838,5.66e-12,52;CL:0000542,9.91e-12,53;CL:0000051,9.91e-12,53;CL:0000624,8.41e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.41e-36;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.89e-21!15;UBERON:0000179!1.89e-21!15;UBERON:0000463!1.89e-21!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.27e-22;2!UBERON:0005058;1.27e-22;2!UBERON:0009113;1.27e-22;2!UBERON:0000178;2.51e-11;15!UBERON:0000179;2.51e-11;15!UBERON:0000463;2.51e-11;15!UBERON:0002390;1.86e-10;32!UBERON:0004177;1.28e-09;5!UBERON:0005057;1.28e-09;5!UBERON:0002193;7.35e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.78e-12,4;UBERON:0005058,7.78e-12,4;UBERON:0009113,7.78e-12,4;UBERON:0003295,7.78e-12,4;UBERON:0005562,7.78e-12,4;UBERON:0000178,3.21e-11,15;UBERON:0000179,3.21e-11,15;UBERON:0000463,3.21e-11,15;UBERON:0003351,3.51e-08,6;UBERON:0004177,3.96e-07,7;UBERON:0005057,3.96e-07,7 | |||
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| ||
|short_description=p2@AK097865 | |||
}} | }} |
Latest revision as of 13:00, 28 July 2015
Short description: | p2@AK097865 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK097865_5end |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | -27bp_to_AK097865_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.43e-36 | 18 |
alpha-beta T cell | 3.43e-36 | 18 |
immature T cell | 3.43e-36 | 18 |
mature T cell | 3.43e-36 | 18 |
immature alpha-beta T cell | 3.43e-36 | 18 |
CD8-positive, alpha-beta T cell | 5.11e-34 | 11 |
T cell | 7.68e-26 | 25 |
pro-T cell | 7.68e-26 | 25 |
lymphoid lineage restricted progenitor cell | 5.66e-12 | 52 |
lymphocyte | 9.91e-12 | 53 |
common lymphoid progenitor | 9.91e-12 | 53 |
CD4-positive, alpha-beta T cell | 8.41e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.78e-12 | 4 |
hemolymphoid system gland | 7.78e-12 | 4 |
thymic region | 7.78e-12 | 4 |
pharyngeal gland | 7.78e-12 | 4 |
thymus primordium | 7.78e-12 | 4 |
blood | 3.21e-11 | 15 |
haemolymphatic fluid | 3.21e-11 | 15 |
organism substance | 3.21e-11 | 15 |
pharyngeal epithelium | 3.51e-08 | 6 |
hemopoietic organ | 3.96e-07 | 7 |
immune organ | 3.96e-07 | 7 |