FFCP PHASE1:Hg19::chr21:37432764..37432831,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:37432764..37432831,- to FFCP PHASE1:Hg19::chr21:37432764..37432831,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54093 | |EntrezGene=54093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1258 | |HGNC=1258 | ||
|TSSclassifier=strong | |||
|UniProt=C9JYV0,Q9NVD3 | |UniProt=C9JYV0,Q9NVD3 | ||
|association_with_transcript=0bp_to_ENST00000399212,ENST00000446166,NM_017438,NR_040086,NR_040087_5end | |||
|cluster_id=chr21:37432764..37432831,- | |||
|description=CAGE_peak_1_at_SETD4_5end | |||
|id=chr21:37432764..37432831,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.31e-11!115;UBERON:0005743!1.57e-08!86;UBERON:0001049!2.66e-08!57;UBERON:0005068!2.66e-08!57;UBERON:0006241!2.66e-08!57;UBERON:0007135!2.66e-08!57;UBERON:0001017!4.50e-08!82;UBERON:0000073!3.62e-07!94;UBERON:0001016!3.62e-07!94;UBERON:0002346!4.68e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.10e-10,114;UBERON:0001049,8.52e-09,56;UBERON:0005068,8.52e-09,56;UBERON:0006241,8.52e-09,56;UBERON:0007135,8.52e-09,56;UBERON:0001017,1.84e-08,81;UBERON:0000073,4.21e-08,53;UBERON:0002616,4.21e-08,53;UBERON:0002346,4.21e-08,86;UBERON:0003075,1.38e-07,82;UBERON:0007284,1.38e-07,82;UBERON:0001016,4.68e-07,89 | |||
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| ||
|short_description=p1@SETD4 | |||
}} | }} |
Latest revision as of 07:20, 18 September 2015
Short description: | p1@SETD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SETD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399212, ENST00000446166, NM_017438, NR_040086, NR_040087_5end |
EntrezGene: | SETD4 |
HGNC: | 1258 |
UniProt: | C9JYV0Q9NVD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.10e-10 | 114 |
neural tube | 8.52e-09 | 56 |
neural rod | 8.52e-09 | 56 |
future spinal cord | 8.52e-09 | 56 |
neural keel | 8.52e-09 | 56 |
central nervous system | 1.84e-08 | 81 |
regional part of nervous system | 4.21e-08 | 53 |
regional part of brain | 4.21e-08 | 53 |
neurectoderm | 4.21e-08 | 86 |
neural plate | 1.38e-07 | 82 |
presumptive neural plate | 1.38e-07 | 82 |
nervous system | 4.68e-07 | 89 |