FFCP PHASE1:Hg19::chr21:37802582..37802591,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:37802582..37802591,+ to FFCP PHASE1:Hg19::chr21:37802582..37802591,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000429588_5end | |||
|cluster_id=chr21:37802582..37802591,+ | |||
|description=CAGE_peak_3_at_ENST00000429588_5end | |||
|id=chr21:37802582..37802591,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.21e-19!24;CL:0000071!1.18e-15!18;CL:0002546!1.18e-15!18;CL:0002057!4.59e-13!42;CL:0000213!1.10e-12!57;CL:0000215!1.10e-12!57;CL:0000115!2.30e-12!35;CL:0000557!4.60e-12!71;CL:0000860!6.64e-12!45;CL:0002009!4.16e-11!65;CL:0000839!6.48e-11!70;CL:0000766!6.71e-11!76;CL:0002194!2.35e-10!63;CL:0000576!2.35e-10!63;CL:0000040!2.35e-10!63;CL:0000559!2.35e-10!63;CL:1000413!5.76e-09!9;CL:0000222!1.45e-08!119;CL:0002078!1.83e-08!44;CL:0000076!4.81e-08!62;CL:0000548!9.24e-07!679;CL:0000004!9.24e-07!679;CL:0000255!9.24e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.92e-37;24!CL:0000071;5.74e-33;18!CL:0000860;2.25e-30;33!CL:0002057;2.25e-30;33!CL:0000115;3.90e-22;36!CL:0000473;3.63e-21;39!CL:0000234;3.63e-21;39!CL:1000413;6.76e-18;9!CL:0002078;1.11e-13;45!CL:0000576;1.70e-13;48!CL:0002544;2.17e-12;6!CL:0000213;6.06e-12;58!CL:0000215;6.06e-12;58!CL:0002543;1.24e-11;6!CL:0000766;2.81e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.17e-37,24;CL:0000071,1.82e-33,18;CL:0002546,1.82e-33,18;CL:0000115,3.74e-27,36;CL:0000860,4.83e-25,42;CL:0002057,4.83e-25,42;CL:0000473,9.34e-23,48;CL:0000234,9.34e-23,48;CL:0002078,3.47e-20,45;CL:0000213,4.46e-20,58;CL:0000215,4.46e-20,58;CL:0000839,2.26e-18,66;CL:1000413,2.70e-18,9;CL:0000557,5.70e-18,67;CL:0000766,2.39e-17,72;CL:0002194,1.44e-16,59;CL:0000576,1.44e-16,59;CL:0000040,1.44e-16,59;CL:0000559,1.44e-16,59;CL:0002009,8.87e-16,61;CL:0002544,1.01e-12,6;CL:0000222,5.33e-12,121;CL:0002543,6.37e-12,6;CL:0000763,2.10e-10,108;CL:0000049,2.10e-10,108;CL:0000076,1.17e-09,63;CL:0002618,7.68e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.74e-33;18!CL:0002057;7.33e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.37e-19!216;UBERON:0001986!1.18e-15!18;UBERON:0004638!1.18e-15!18;UBERON:0004852!1.18e-15!18;UBERON:0000055!1.34e-15!69;UBERON:0002049!1.37e-15!79;UBERON:0007798!1.37e-15!79;UBERON:0001981!8.69e-14!60;UBERON:0007500!8.69e-14!60;UBERON:0004537!8.69e-14!60;UBERON:0006965!8.69e-14!60;UBERON:0004535!7.13e-13!110;UBERON:0000487!1.72e-12!22;UBERON:0001009!6.24e-12!113;UBERON:0004872!8.91e-12!84;UBERON:0003914!1.89e-11!118;UBERON:0001637!8.34e-11!42;UBERON:0003509!8.34e-11!42;UBERON:0004572!8.34e-11!42;UBERON:0002371!4.07e-10!80;UBERON:0006914!5.86e-10!25;UBERON:0001474!4.17e-09!86;UBERON:0004573!5.17e-09!33;UBERON:0004571!5.17e-09!33;UBERON:0003915!5.76e-09!9;UBERON:0004700!5.76e-09!9;UBERON:0001917!5.76e-09!9;UBERON:0002405!9.30e-09!115;UBERON:0002193!9.39e-09!112;UBERON:0000926!5.04e-08!448;UBERON:0004120!5.04e-08!448;UBERON:0006603!5.04e-08!448;UBERON:0000947!8.86e-08!21;UBERON:0010191!8.86e-08!21;UBERON:0002390!1.72e-07!102;UBERON:0003061!1.72e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.74e-33;18!UBERON:0001986;5.74e-33;18!UBERON:0004852;5.74e-33;18!UBERON:0000487;6.20e-26;22!UBERON:0006914;3.78e-22;25!UBERON:0003915;6.76e-18;9!UBERON:0004700;6.76e-18;9!UBERON:0001917;6.76e-18;9!UBERON:0000490;4.39e-16;33!UBERON:0007500;1.08e-11;56!UBERON:0001981;1.08e-11;56!UBERON:0004537;1.08e-11;56!UBERON:0000055;1.51e-11;65!UBERON:0001637;2.22e-11;42!UBERON:0003509;2.22e-11;42!UBERON:0004572;2.22e-11;42!UBERON:0004573;2.32e-09;33!UBERON:0004571;2.32e-09;33!UBERON:0000947;5.99e-09;21!UBERON:0010191;5.99e-09;21!UBERON:0002049;3.77e-08;75!UBERON:0007798;3.77e-08;75!UBERON:0003914;7.84e-08;74!UBERON:0001638;1.89e-07;9!UBERON:0003920;1.89e-07;9!UBERON:0004582;1.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.82e-33,18;UBERON:0001986,1.82e-33,18;UBERON:0004852,1.82e-33,18;UBERON:0003081,1.49e-26,203;UBERON:0000487,2.47e-26,22;UBERON:0006914,1.71e-22,25;UBERON:0000055,1.79e-22,68;UBERON:0007500,9.95e-20,59;UBERON:0001981,9.95e-20,59;UBERON:0004537,9.95e-20,59;UBERON:0006965,9.95e-20,59;UBERON:0002049,2.58e-18,78;UBERON:0007798,2.58e-18,78;UBERON:0003915,2.70e-18,9;UBERON:0004700,2.70e-18,9;UBERON:0001917,2.70e-18,9;UBERON:0000926,3.17e-18,315;UBERON:0004120,3.17e-18,315;UBERON:0006603,3.17e-18,315;UBERON:0002405,3.61e-16,93;UBERON:0002371,5.93e-16,76;UBERON:0001474,3.73e-14,82;UBERON:0004872,8.21e-14,83;UBERON:0001637,3.88e-13,42;UBERON:0003509,3.88e-13,42;UBERON:0004572,3.88e-13,42;UBERON:0004765,4.36e-13,90;UBERON:0002193,1.42e-12,108;UBERON:0004535,2.73e-12,109;UBERON:0001009,1.05e-11,112;UBERON:0003914,2.87e-11,117;UBERON:0001434,6.33e-11,100;UBERON:0002390,1.74e-10,98;UBERON:0003061,1.74e-10,98;UBERON:0004573,2.35e-09,33;UBERON:0004571,2.35e-09,33;UBERON:0002204,2.38e-09,167;UBERON:0000947,3.53e-09,21;UBERON:0010191,3.53e-09,21;UBERON:0000490,8.86e-08,148;UBERON:0001638,1.23e-07,9;UBERON:0003920,1.23e-07,9;UBERON:0004582,1.23e-07,9 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,2.53299878168311,0,0,0.491467873003018,0,0.436882744260345,0,0,0,0,1.20538905604795,2.19093027116212,0.975865597581014,0,0,0,0,0,0,0,0,0.157421562627358,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0,0,0,0,3.05336301437086,4.1566353805769,2.66842467306598,3.0215774797739,2.05583944010913,1.23882548358041,0.575384784644301,1.0246428261164,1.41889337933151,1.03423704220986,3.22742341791913,1.35426486594342,2.63539275359647,1.91034305040492,1.34834090667051,4.28517449319264,3.53021929783703,6.39337125799041,0.329851300186716,1.19678194572979,1.70489900213078,0.290209238628584,1.13477044938228,0.622822248995575,1.7587406567972,2.08593167368081,1.08594422352558,1.21079900526674,1.84138817993782,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0,0,0,3.9752481473341,3.4409383804245,6.2485290289367,3.39184765154406,3.77549492588915,3.30141650328081,3.34391946458897,8.0109195342492,7.82685777910763,10.0416183829401,1.20848795132744,3.04108842287405,3.1728067481262,1.83831540172934,3.24056779152704,5.00078478390847,2.2452937262617,1.57656072676651,1.53316637465883,3.79706263827252,2.19842092716489,0,0,0,0.993943903390637,1.77282716330412,0,1.14734648299525,0.354668382198357,0.560677600142307,2.1349799145941,1.72667283892012,0,0.942974704487816,0.490385709340376,0.151357427644931,0.576175924479999,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,1.43402297694502,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0,0,0,0,0,0.115930404975077,0.939269553886573,2.02113026865503,0.462985512576611,0.570762456703795,0,0,0.738651018262192,1.63802985597466,0.297262324577456,0,1.17587489739202,0.141775097242386,0,0,0,0,0.088048434013226,3.10992173311158,2.30591925467138,4.16600030307054,0,0,0,0,0,0,0,0.112131084345361,0,0,4.00742318849111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.35142424497814,0,2.27407504055985,0,1.99267679560631,0.184369168541703,0,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0.40101294060657,0,0,0,0,0.451199612907412,0.385076685522074,0,0,0.633309773357254,0,1.36074964221213,0.863663664408557,4.62681758070868,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0,0.445160178233687,0.165284915360978,0.768760269460425,0.382838137483752,0.2023155617111,0.464845549297286,0.31481234683064,0,1.84820148105653,0.532306030317022,0,1.29726953372744,1.00187420719394,0,0,0.190630193923825,0,0,0,1.56989728039846,0,0.274537029736055,0,0.606547444719948,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0.551365343546124,1.32687795048244,0.876901770507525,0,0.655894752046633,1.42037263873893,0,0,0.143411352204052,0.0982490410131212,1.78335525740625,0,0,0,0,0,0.192444225451024,0,0,0.376575203107117,1.29151611801369,0,0.443430153536676,1.1486170010348,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,1.7235483311913,0.423347165447766,0,0.561594356226918,0,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,1.19372242368845,0,1.22864280839693,0,0,2.22617410045812,0,0,0.19924798825107,0,0,0.613612095012929,0.246169610922139,0,0.718946809178615,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0.683652335082007,0,0,0.108647371922008,0.638002319463839,1.00757352742049,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.261177619741208,0.34945333648406,1.37588825977293,0,0.0730893170861856,0,0.193978032976839,0,0,0.685209623233754,0.19871461170299,0,0.586654148204409,0.160317640503067,0,0,0,0,3.77508995296322,0,0.124252535565433,0,0.407712618220842,0.836822770498666,0.101998217636322,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0.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| ||
|short_description=p3@ENST00000429588 | |||
}} | }} |
Latest revision as of 17:41, 28 July 2015
Short description: | p3@ENST00000429588 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000429588_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000429588_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.17e-37 | 24 |
blood vessel endothelial cell | 1.82e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.82e-33 | 18 |
endothelial cell | 3.74e-27 | 36 |
classical monocyte | 4.83e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.83e-25 | 42 |
defensive cell | 9.34e-23 | 48 |
phagocyte | 9.34e-23 | 48 |
meso-epithelial cell | 3.47e-20 | 45 |
lining cell | 4.46e-20 | 58 |
barrier cell | 4.46e-20 | 58 |
myeloid lineage restricted progenitor cell | 2.26e-18 | 66 |
endothelial cell of artery | 2.70e-18 | 9 |
granulocyte monocyte progenitor cell | 5.70e-18 | 67 |
myeloid leukocyte | 2.39e-17 | 72 |
monopoietic cell | 1.44e-16 | 59 |
monocyte | 1.44e-16 | 59 |
monoblast | 1.44e-16 | 59 |
promonocyte | 1.44e-16 | 59 |
macrophage dendritic cell progenitor | 8.87e-16 | 61 |
aortic endothelial cell | 1.01e-12 | 6 |
mesodermal cell | 5.33e-12 | 121 |
vein endothelial cell | 6.37e-12 | 6 |
myeloid cell | 2.10e-10 | 108 |
common myeloid progenitor | 2.10e-10 | 108 |
squamous epithelial cell | 1.17e-09 | 63 |
endothelial cell of umbilical vein | 7.68e-07 | 3 |