FFCP PHASE1:Hg19::chr2:174026484..174026523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:174026484..174026523,+ | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_at_chr2:174026484..174026523,+ | |||
|id=chr2:174026484..174026523,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.11e-22!42;CL:0000860!4.72e-20!45;CL:0002194!5.95e-13!63;CL:0000576!5.95e-13!63;CL:0000040!5.95e-13!63;CL:0000559!5.95e-13!63;CL:0002009!1.91e-12!65;CL:0000766!1.42e-11!76;CL:0000181!2.11e-11!12;CL:0000417!2.11e-11!12;CL:0000668!2.11e-11!12;CL:0000414!2.11e-11!12;CL:0000412!2.11e-11!12;CL:0000182!2.11e-11!12;CL:0000839!2.65e-11!70;CL:0000557!4.28e-11!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.37e-43;33!CL:0002057;3.37e-43;33!CL:0000473;1.79e-31;39!CL:0000234;1.79e-31;39!CL:0000576;4.30e-23;48!CL:0000766;4.69e-11;69!CL:0000182;4.86e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.81e-38,42;CL:0002057,3.81e-38,42;CL:0000473,3.81e-33,48;CL:0000234,3.81e-33,48;CL:0002194,3.88e-26,59;CL:0000576,3.88e-26,59;CL:0000040,3.88e-26,59;CL:0000559,3.88e-26,59;CL:0002009,3.11e-25,61;CL:0000839,3.31e-23,66;CL:0000557,7.76e-23,67;CL:0000766,3.86e-21,72;CL:0002087,8.74e-15,115;CL:0002031,4.39e-14,120;CL:0000763,1.68e-13,108;CL:0000049,1.68e-13,108;CL:0000738,3.49e-12,136;CL:0002032,5.83e-10,161;CL:0000837,5.83e-10,161;CL:0000037,1.87e-09,168;CL:0000988,7.29e-09,177;CL:0000182,4.81e-08,12 | |||
|ontology_enrichment_development_v019=CL:0002057;8.92e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;4.67e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,4.44e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002405!3.67e-13!115;UBERON:0008835!2.06e-10!22;UBERON:0003894!2.06e-10!22;UBERON:0009854!6.67e-10!23;UBERON:0001474!8.30e-10!86;UBERON:0002371!1.88e-09!80;UBERON:0002107!1.93e-09!19;UBERON:0006925!1.93e-09!19;UBERON:0008836!1.93e-09!19;UBERON:0007499!5.25e-09!25;UBERON:0009497!5.25e-09!25;UBERON:0000015!5.25e-09!25;UBERON:0002423!5.25e-09!25;UBERON:0006235!5.25e-09!25;UBERON:0004161!5.25e-09!25;UBERON:0001897!8.84e-09!2;UBERON:0009856!1.31e-08!26;UBERON:0004765!8.43e-08!101;UBERON:0001434!8.43e-08!101;UBERON:0003929!9.69e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.33e-08;19!UBERON:0006925;1.33e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.12e-20,76;UBERON:0001474,2.34e-18,82;UBERON:0004765,1.44e-16,90;UBERON:0002405,5.62e-16,93;UBERON:0002390,4.55e-15,98;UBERON:0003061,4.55e-15,98;UBERON:0001434,9.90e-15,100;UBERON:0002193,1.68e-13,108;UBERON:0002107,1.29e-08,19;UBERON:0006925,1.29e-08,19;UBERON:0008836,1.29e-08,19;UBERON:0002204,4.85e-08,167;UBERON:0008835,1.84e-07,22;UBERON:0003894,1.84e-07,22;UBERON:0009854,3.83e-07,23 | |||
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| ||
|short_description=p@chr2:174026484..174026523,+ | |||
}} | }} |
Latest revision as of 02:34, 29 July 2015
Short description: | p@chr2:174026484..174026523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:174026484..174026523, + |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.81e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.81e-38 | 42 |
defensive cell | 3.81e-33 | 48 |
phagocyte | 3.81e-33 | 48 |
monopoietic cell | 3.88e-26 | 59 |
monocyte | 3.88e-26 | 59 |
monoblast | 3.88e-26 | 59 |
promonocyte | 3.88e-26 | 59 |
macrophage dendritic cell progenitor | 3.11e-25 | 61 |
myeloid lineage restricted progenitor cell | 3.31e-23 | 66 |
granulocyte monocyte progenitor cell | 7.76e-23 | 67 |
myeloid leukocyte | 3.86e-21 | 72 |
nongranular leukocyte | 8.74e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 4.39e-14 | 120 |
myeloid cell | 1.68e-13 | 108 |
common myeloid progenitor | 1.68e-13 | 108 |
leukocyte | 3.49e-12 | 136 |
hematopoietic oligopotent progenitor cell | 5.83e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.83e-10 | 161 |
hematopoietic stem cell | 1.87e-09 | 168 |
hematopoietic cell | 7.29e-09 | 177 |
hepatocyte | 4.81e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.12e-20 | 76 |
bone element | 2.34e-18 | 82 |
skeletal element | 1.44e-16 | 90 |
immune system | 5.62e-16 | 93 |
hematopoietic system | 4.55e-15 | 98 |
blood island | 4.55e-15 | 98 |
skeletal system | 9.90e-15 | 100 |
hemolymphoid system | 1.68e-13 | 108 |
liver | 1.29e-08 | 19 |
digestive gland | 1.29e-08 | 19 |
liver bud | 1.29e-08 | 19 |
musculoskeletal system | 4.85e-08 | 167 |
hepatic diverticulum | 1.84e-07 | 22 |
liver primordium | 1.84e-07 | 22 |
digestive tract diverticulum | 3.83e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.44e-11 | 1 |