FFCP PHASE1:Hg19::chr3:121797240..121797259,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:121797240..121797259,- | |||
|coexpression_cluster_id=C763 | |||
|description=CAGE_peak_at_chr3:121797240..121797259,- | |||
|id=chr3:121797240..121797259,- | |||
|ontology_enrichment_celltype=CL:0000945!4.97e-41!24;CL:0000826!4.97e-41!24;CL:0000542!1.21e-26!53;CL:0000051!1.21e-26!53;CL:0000838!1.90e-24!52;CL:0002087!4.56e-22!119;CL:0002031!5.72e-21!124;CL:0000738!7.06e-21!140;CL:0000988!7.74e-20!182;CL:0000037!5.90e-17!172;CL:0000566!5.90e-17!172;CL:0002032!1.25e-16!165;CL:0000837!1.25e-16!165;CL:0000080!8.01e-12!6;CL:0000236!6.25e-10!14;CL:0001014!2.64e-09!2;CL:0001016!2.64e-09!2;CL:0000785!4.70e-09!2;CL:0000955!4.70e-09!2;CL:0000818!4.70e-09!2;CL:0000954!4.70e-09!2;CL:0000816!4.70e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.57e-26;24!CL:0000946;2.57e-14;1!CL:0000786;2.57e-14;1!CL:0000542;5.90e-08;53!CL:0001014;6.15e-08;2!CL:0001016;6.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.57e-26,24;CL:0000826,1.57e-26,24;CL:0000838,1.39e-15,52;CL:0000542,2.83e-15,53;CL:0000051,2.83e-15,53;CL:0000946,3.15e-14,1;CL:0000786,3.15e-14,1;CL:0000980,3.15e-14,1;CL:0000988,3.78e-11,177;CL:0002031,8.25e-10,120;CL:0000738,1.59e-08,136;CL:0002087,2.76e-08,115;CL:0001014,6.58e-08,2;CL:0001016,6.58e-08,2;CL:0000785,9.19e-08,2;CL:0000955,9.19e-08,2;CL:0000818,9.19e-08,2;CL:0000954,9.19e-08,2;CL:0000816,9.19e-08,2;CL:0002032,5.07e-07,161;CL:0000837,5.07e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;5.90e-08;53!CL:0000954;8.32e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!9.32e-26!10;DOID:2531!4.65e-09!51;DOID:0060083!4.65e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:630;1.07e-14;1!DOID:0050177;1.07e-14;1!DOID:0050427;1.07e-14;1!DOID:0060060;1.41e-14;1!DOID:0060061;1.41e-14;1!DOID:8691;1.41e-14;1!DOID:0060058;1.93e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.07e-14,1;DOID:0050177,1.07e-14,1;DOID:0050427,1.07e-14,1;DOID:0060060,1.41e-14,1;DOID:0060061,1.41e-14,1;DOID:8691,1.41e-14,1;DOID:0060058,1.75e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.36e-12!3;UBERON:0004854!1.36e-12!3;UBERON:0009034!1.36e-12!3;UBERON:0002095!1.36e-12!3;UBERON:0004782!1.36e-12!3;UBERON:0003281!1.36e-12!3;UBERON:0009664!1.36e-12!3;UBERON:0002296!1.36e-12!3;UBERON:0005602!1.36e-12!3;UBERON:0001179!1.36e-12!3;UBERON:0006293!1.36e-12!3;UBERON:0002390!1.19e-08!102;UBERON:0003061!1.19e-08!102;UBERON:0002193!1.49e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.91e-13;10!UBERON:0000178;1.05e-08;15!UBERON:0000179;1.05e-08;15!UBERON:0000463;1.05e-08;15!UBERON:0002390;7.44e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.91e-13,10;UBERON:0000358,8.91e-13,10;UBERON:0000307,8.91e-13,10;UBERON:0000091,8.91e-13,10;UBERON:0000087,8.91e-13,10;UBERON:0007010,8.91e-13,10;UBERON:0007806,8.91e-13,10;UBERON:0008780,8.91e-13,10;UBERON:0005728,8.91e-13,10;UBERON:0000178,1.05e-08,15;UBERON:0000179,1.05e-08,15;UBERON:0000463,1.05e-08,15 | |||
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| ||
|short_description=p@chr3:121797240..121797259,- | |||
}} | }} |
Latest revision as of 14:59, 29 July 2015
Short description: | p@chr3:121797240..121797259, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:121797240..121797259, - |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.57e-26 | 24 |
pro-B cell | 1.57e-26 | 24 |
lymphoid lineage restricted progenitor cell | 1.39e-15 | 52 |
lymphocyte | 2.83e-15 | 53 |
common lymphoid progenitor | 2.83e-15 | 53 |
antibody secreting cell | 3.15e-14 | 1 |
plasma cell | 3.15e-14 | 1 |
plasmablast | 3.15e-14 | 1 |
hematopoietic cell | 3.78e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 8.25e-10 | 120 |
leukocyte | 1.59e-08 | 136 |
nongranular leukocyte | 2.76e-08 | 115 |
CD1a-positive Langerhans cell | 6.58e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.58e-08 | 2 |
mature B cell | 9.19e-08 | 2 |
pre-B-II cell | 9.19e-08 | 2 |
transitional stage B cell | 9.19e-08 | 2 |
small pre-B-II cell | 9.19e-08 | 2 |
immature B cell | 9.19e-08 | 2 |
hematopoietic oligopotent progenitor cell | 5.07e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.07e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.91e-13 | 10 |
blastocyst | 8.91e-13 | 10 |
blastula | 8.91e-13 | 10 |
bilaminar disc | 8.91e-13 | 10 |
inner cell mass | 8.91e-13 | 10 |
cleaving embryo | 8.91e-13 | 10 |
connecting stalk | 8.91e-13 | 10 |
inner cell mass derived epiblast | 8.91e-13 | 10 |
extraembryonic mesoderm | 8.91e-13 | 10 |
blood | 1.05e-08 | 15 |
haemolymphatic fluid | 1.05e-08 | 15 |
organism substance | 1.05e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.07e-14 | 1 |
monogenic disease | 1.07e-14 | 1 |
xeroderma pigmentosum | 1.07e-14 | 1 |
non-Hodgkin lymphoma | 1.41e-14 | 1 |
cutaneous T cell lymphoma | 1.41e-14 | 1 |
mycosis fungoides | 1.41e-14 | 1 |
lymphoma | 1.75e-12 | 10 |