FFCP PHASE1:Hg19::chr3:49130895..49130917,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:49130895..49130917,- to FFCP PHASE1:Hg19::chr3:49130895..49130917,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54870 | |EntrezGene=54870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24713 | |HGNC=24713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010hkq.2_5end | |||
|cluster_id=chr3:49130895..49130917,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_12_at_QRICH1_5end | |||
|id=chr3:49130895..49130917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.54e-14!94;UBERON:0001016!5.54e-14!94;UBERON:0005743!4.39e-13!86;UBERON:0001017!5.64e-13!82;UBERON:0002346!1.15e-09!90;UBERON:0000955!2.61e-09!69;UBERON:0006238!2.61e-09!69;UBERON:0003075!3.10e-09!86;UBERON:0007284!3.10e-09!86;UBERON:0002616!1.74e-08!59;UBERON:0000924!2.10e-08!173;UBERON:0006601!2.10e-08!173;UBERON:0004121!5.28e-08!169;UBERON:0001049!8.24e-08!57;UBERON:0005068!8.24e-08!57;UBERON:0006241!8.24e-08!57;UBERON:0007135!8.24e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.66e-08;20!UBERON:0002619;6.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.61e-10,81;UBERON:0001016,9.15e-10,89;UBERON:0001049,3.38e-08,56;UBERON:0005068,3.38e-08,56;UBERON:0006241,3.38e-08,56;UBERON:0007135,3.38e-08,56;UBERON:0001950,4.28e-08,20;UBERON:0000073,9.79e-08,53;UBERON:0002616,9.79e-08,53;UBERON:0003075,1.40e-07,82;UBERON:0007284,1.40e-07,82;UBERON:0002619,3.09e-07,22;UBERON:0010371,3.61e-07,104;UBERON:0002346,5.24e-07,86;UBERON:0001869,8.72e-07,32;UBERON:0000955,9.28e-07,68;UBERON:0006238,9.28e-07,68 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.893922188854576,0,2.53299878168311,0,0,0.737201809504527,0,0.436882744260345,0.791300934685361,0.123766352960047,0,0,0,0,0.487932798790507,1.23121058076788,0,1.25381888591235,0.572471974262113,0.547497700291537,0.251085279189606,0.382067028739756,0.57470412614962,0.0787107813136792,0.393364276848904,0.767658796194425,0.464448369948228,0,0.30120591877825,0,0.92960640696362,0.568676929949686,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0.419317291016752,0,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0.574752439954483,0,1.90810750907073,1.1384259382189,0.587237189370939,1.52909291250092,0,0.560508562981536,0.263384084775077,0.786839080455332,1.17903228824749,0.411202997999018,0,0,0,0,0,0,0,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0.821127996921047,1.20964045934839,0.802320587350522,1.44824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0.756278537312543,0.443458794925128,0.702678285545008,8.57912944510018,0,0,0,0,0.26591592103773,0.476981248610684,0,0,0.39752481473341,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0.17859945656816,0,0.337834441449967,0,0.949265659568129,0.366403487860815,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,1.05950199351452,0.576175924479999,0.937285727335186,0.312160076830321,0,0.448346041655403,0.117434498643765,0.323745888736263,0,0.204154171254893,0,0.723280468230358,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0.113432183160021,0.358779271377724,0.427114777637135,0,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0,0.184099797284599,0.161646056818812,1.06502877754984,0.201504196455281,0,0,0,0,0.487894824518382,0.662648841607426,0.232387885739037,0.932949495138334,0.504641701751257,1.82488679537915,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0.857839051492628,0.548751427043128,0,0.201057944823262,0,0.325808305310325,0,1.44331342025273,0.695582429850461,1.6437217193015,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.44024217006613,0.414656231081544,0.288239906833923,0.25248486685276,0.190493682876507,0,0,0,0.411309970813294,0,0.571652865261156,0.448524337381443,1.30788020649984,0.36669142910475,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0.499864955910285,0,0.502257091432126,0,1.19812427745791,0,0,0.289562613335158,0.205476322550383,0.179060963239896,1.00876629594175,0.591092280605782,1.07813787429759,0.513372145118994,1.52456774533478,1.30139853857622,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0.24538298343828,2.00068208423871,0,0,0.178428988797162,0.473107245101804,0.117141414992713,1.20378439891088,0,0,0.664225598535437,0.553107505625109,0.0868836144680828,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0.61384789315225,0.561320188866147,0.384417447767103,0.511707249066704,0.482561763430822,1.48418066444991,0.462629081407967,0.355123450626254,0.574890092096664,0.519254429183621,0.232420756919918,0,0,0,0.68888668898764,0.546273504020151,0.393373244878272,0,0,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0.261435451024901,0.256450125116389,0.984043937099117,0,0.412164046590889,0.183138929636687,0.165018999841176,0.574265537996172,0,0,0.290012154876366,0.462145851343933,0.307007349452259,0,0.107420244868274,0.145016693914229,0.340906509664404,0.712256285173899,0.330569830721956,0.192190067365106,0,0.10115778085555,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0.95460974377781,0,0.359744915166629,1.09814811894422,0,0.808729926293264,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0.565621727814851,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0,0.75894634753143,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,1.06824071127473,0,0,0.371606350251437,0.432807638929335,0.213425530045242,0.478278818186467,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0.50787533340481,0.160588075103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| ||
|short_description=p12@QRICH1 | |||
}} | }} |
Latest revision as of 15:59, 18 September 2015
Short description: | p12@QRICH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_QRICH1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc010hkq.2_5end |
EntrezGene: | QRICH1 |
HGNC: | 24713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.61e-10 | 81 |
nervous system | 9.15e-10 | 89 |
neural tube | 3.38e-08 | 56 |
neural rod | 3.38e-08 | 56 |
future spinal cord | 3.38e-08 | 56 |
neural keel | 3.38e-08 | 56 |
neocortex | 4.28e-08 | 20 |
regional part of nervous system | 9.79e-08 | 53 |
regional part of brain | 9.79e-08 | 53 |
neural plate | 1.40e-07 | 82 |
presumptive neural plate | 1.40e-07 | 82 |
regional part of cerebral cortex | 3.09e-07 | 22 |
ecto-epithelium | 3.61e-07 | 104 |
neurectoderm | 5.24e-07 | 86 |
cerebral hemisphere | 8.72e-07 | 32 |
brain | 9.28e-07 | 68 |
future brain | 9.28e-07 | 68 |