FFCP PHASE1:Hg19::chr5:14143331..14143406,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:14143331..14143406,+ to FFCP PHASE1:Hg19::chr5:14143331..14143406,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt=O75962 | |UniProt=O75962 | ||
|association_with_transcript=-404bp_to_ENST00000344204,ENST00000502816,ENST00000505971_5end | |||
|cluster_id=chr5:14143331..14143406,+ | |||
|description=CAGE_peak_2_at_TRIO_5end | |||
|id=chr5:14143331..14143406,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.39e-14!82;UBERON:0005743!3.90e-12!86;UBERON:0000073!3.35e-11!94;UBERON:0001016!3.35e-11!94;UBERON:0000955!3.99e-11!69;UBERON:0006238!3.99e-11!69;UBERON:0001049!7.14e-11!57;UBERON:0005068!7.14e-11!57;UBERON:0006241!7.14e-11!57;UBERON:0007135!7.14e-11!57;UBERON:0000956!6.77e-10!25;UBERON:0000203!6.77e-10!25;UBERON:0002616!7.07e-10!59;UBERON:0002619!9.09e-10!22;UBERON:0002020!1.87e-09!34;UBERON:0003528!1.87e-09!34;UBERON:0001869!2.13e-09!32;UBERON:0001950!3.68e-09!20;UBERON:0001893!1.04e-08!34;UBERON:0002791!1.77e-08!33;UBERON:0003080!1.94e-08!42;UBERON:0002780!5.06e-08!41;UBERON:0001890!5.06e-08!41;UBERON:0006240!5.06e-08!41;UBERON:0000062!1.96e-07!511;UBERON:0000467!4.21e-07!625;UBERON:0000480!4.32e-07!626;UBERON:0000468!5.27e-07!659;UBERON:0000064!6.05e-07!219;UBERON:0003075!7.62e-07!86;UBERON:0007284!7.62e-07!86;UBERON:0004121!9.05e-07!169;UBERON:0000475!1.00e-06!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.06e-09;25!UBERON:0000203;1.06e-09;25!UBERON:0002619;1.31e-09;22!UBERON:0001950;5.03e-09;20!UBERON:0001869;1.06e-08;32!UBERON:0003528;2.31e-08;34!UBERON:0002020;2.31e-08;34!UBERON:0002791;3.11e-08;32!UBERON:0001893;1.18e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-13,81;UBERON:0001016,2.49e-12,89;UBERON:0000955,1.01e-10,68;UBERON:0006238,1.01e-10,68;UBERON:0001049,1.89e-10,56;UBERON:0005068,1.89e-10,56;UBERON:0006241,1.89e-10,56;UBERON:0007135,1.89e-10,56;UBERON:0000956,6.75e-10,25;UBERON:0000203,6.75e-10,25;UBERON:0002619,9.07e-10,22;UBERON:0000073,1.09e-09,53;UBERON:0002616,1.09e-09,53;UBERON:0003528,1.86e-09,34;UBERON:0002020,1.86e-09,34;UBERON:0001869,2.13e-09,32;UBERON:0001950,3.67e-09,20;UBERON:0002791,6.04e-09,32;UBERON:0001893,1.04e-08,34;UBERON:0002780,5.05e-08,41;UBERON:0001890,5.05e-08,41;UBERON:0003080,5.05e-08,41;UBERON:0006240,5.05e-08,41 | |||
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| ||
|short_description=p2@TRIO | |||
}} | }} |
Latest revision as of 05:43, 25 September 2015
Short description: | p2@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIO_5end |
Coexpression cluster: | NA |
Association with transcript: | -404bp_to_ENST00000344204, ENST00000502816, ENST00000505971_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | O75962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.95e-13 | 81 |
nervous system | 2.49e-12 | 89 |
brain | 1.01e-10 | 68 |
future brain | 1.01e-10 | 68 |
neural tube | 1.89e-10 | 56 |
neural rod | 1.89e-10 | 56 |
future spinal cord | 1.89e-10 | 56 |
neural keel | 1.89e-10 | 56 |
cerebral cortex | 6.75e-10 | 25 |
pallium | 6.75e-10 | 25 |
regional part of cerebral cortex | 9.07e-10 | 22 |
regional part of nervous system | 1.09e-09 | 53 |
regional part of brain | 1.09e-09 | 53 |
brain grey matter | 1.86e-09 | 34 |
gray matter | 1.86e-09 | 34 |
cerebral hemisphere | 2.13e-09 | 32 |
neocortex | 3.67e-09 | 20 |
regional part of telencephalon | 6.04e-09 | 32 |
telencephalon | 1.04e-08 | 34 |
regional part of forebrain | 5.05e-08 | 41 |
forebrain | 5.05e-08 | 41 |
anterior neural tube | 5.05e-08 | 41 |
future forebrain | 5.05e-08 | 41 |