FFCP PHASE1:Hg19::chr6:160101406..160101414,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:160101406..160101414,+ | |||
|description=CAGE_peak_at_chr6:160101406..160101414,+ | |||
|id=chr6:160101406..160101414,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.55e-21!42;CL:0000860!1.04e-20!45;CL:0002194!1.46e-13!63;CL:0000576!1.46e-13!63;CL:0000040!1.46e-13!63;CL:0000559!1.46e-13!63;CL:0002009!6.23e-13!65;CL:0000839!1.23e-12!70;CL:0000766!2.00e-12!76;CL:0000557!2.91e-11!71;CL:0000763!1.74e-07!112;CL:0000049!1.74e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-28;33!CL:0002057;2.48e-28;33!CL:0000473;1.55e-22;39!CL:0000234;1.55e-22;39!CL:0000576;3.34e-14;48!CL:0000775;4.42e-14;3!CL:0000214;4.72e-14;3!CL:0000766;1.00e-08;69!CL:0000763;1.42e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.34e-25,42;CL:0002057,2.34e-25,42;CL:0000473,5.48e-22,48;CL:0000234,5.48e-22,48;CL:0000766,8.25e-20,72;CL:0002194,2.89e-17,59;CL:0000576,2.89e-17,59;CL:0000040,2.89e-17,59;CL:0000559,2.89e-17,59;CL:0002009,1.18e-16,61;CL:0000839,2.73e-15,66;CL:0000557,4.84e-15,67;CL:0000214,4.15e-14,3;CL:0000775,4.42e-14,3;CL:0000763,1.38e-12,108;CL:0000049,1.38e-12,108;CL:0000738,1.38e-09,136;CL:0002087,4.00e-08,115;CL:0002032,8.79e-08,161;CL:0000837,8.79e-08,161;CL:0002031,1.02e-07,120;CL:0000037,2.26e-07,168;CL:0000988,6.82e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-17;42!UBERON:0000358;4.57e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.67e-10!80;UBERON:0001474!5.58e-09!86;UBERON:0002405!2.19e-08!115;UBERON:0004765!2.50e-08!101;UBERON:0001434!2.50e-08!101;UBERON:0002193!4.12e-08!112;UBERON:0002390!3.50e-07!102;UBERON:0003061!3.50e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.72e-14;3!UBERON:0007616;4.72e-14;3!UBERON:0002217;4.72e-14;3!UBERON:0002018;4.72e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.15e-14,3;UBERON:0007616,4.15e-14,3;UBERON:0002217,4.15e-14,3;UBERON:0002018,4.15e-14,3;UBERON:0001434,9.37e-14,100;UBERON:0002371,4.34e-13,76;UBERON:0002405,1.70e-12,93;UBERON:0001474,5.06e-12,82;UBERON:0004765,8.09e-11,90;UBERON:0002193,1.62e-10,108;UBERON:0002390,8.28e-10,98;UBERON:0003061,8.28e-10,98;UBERON:0002204,8.86e-09,167 | |||
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| ||
|short_description=p@chr6:160101406..160101414,+ | |||
}} | }} |
Latest revision as of 21:36, 30 July 2015
Short description: | p@chr6:160101406..160101414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:160101406..160101414, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.34e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-25 | 42 |
defensive cell | 5.48e-22 | 48 |
phagocyte | 5.48e-22 | 48 |
myeloid leukocyte | 8.25e-20 | 72 |
monopoietic cell | 2.89e-17 | 59 |
monocyte | 2.89e-17 | 59 |
monoblast | 2.89e-17 | 59 |
promonocyte | 2.89e-17 | 59 |
macrophage dendritic cell progenitor | 1.18e-16 | 61 |
myeloid lineage restricted progenitor cell | 2.73e-15 | 66 |
granulocyte monocyte progenitor cell | 4.84e-15 | 67 |
synovial cell | 4.15e-14 | 3 |
neutrophil | 4.42e-14 | 3 |
myeloid cell | 1.38e-12 | 108 |
common myeloid progenitor | 1.38e-12 | 108 |
leukocyte | 1.38e-09 | 136 |
nongranular leukocyte | 4.00e-08 | 115 |
hematopoietic oligopotent progenitor cell | 8.79e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.79e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 1.02e-07 | 120 |
hematopoietic stem cell | 2.26e-07 | 168 |
hematopoietic cell | 6.82e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.15e-14 | 3 |
layer of synovial tissue | 4.15e-14 | 3 |
synovial joint | 4.15e-14 | 3 |
synovial membrane of synovial joint | 4.15e-14 | 3 |
skeletal system | 9.37e-14 | 100 |
bone marrow | 4.34e-13 | 76 |
immune system | 1.70e-12 | 93 |
bone element | 5.06e-12 | 82 |
skeletal element | 8.09e-11 | 90 |
hemolymphoid system | 1.62e-10 | 108 |
hematopoietic system | 8.28e-10 | 98 |
blood island | 8.28e-10 | 98 |
musculoskeletal system | 8.86e-09 | 167 |