FFCP PHASE1:Hg19::chr6:2876850..2876863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221756 | |EntrezGene=221756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-106bp_to_ENST00000420981,ENST00000545177,NR_033851,uc003mud.2_5end | |||
|cluster_id=chr6:2876850..2876863,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_MGC39372_5end | |||
|id=chr6:2876850..2876863,- | |||
|ontology_enrichment_celltype=CL:0000860!5.52e-60!45;CL:0002057!3.32e-57!42;CL:0002009!3.91e-43!65;CL:0002194!4.79e-42!63;CL:0000576!4.79e-42!63;CL:0000040!4.79e-42!63;CL:0000559!4.79e-42!63;CL:0000766!1.39e-40!76;CL:0000557!1.02e-38!71;CL:0000839!5.90e-37!70;CL:0000763!5.16e-26!112;CL:0000049!5.16e-26!112;CL:0000738!1.66e-21!140;CL:0002087!7.14e-21!119;CL:0002031!1.31e-19!124;CL:0000037!1.33e-15!172;CL:0000566!1.33e-15!172;CL:0002032!1.39e-15!165;CL:0000837!1.39e-15!165;CL:0000988!3.39e-14!182;CL:0000063!1.07e-08!578;CL:0002139!1.81e-07!24;CL:0000134!3.33e-07!358;CL:0002320!7.44e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.36e-81;33!CL:0002057;6.36e-81;33!CL:0000473;2.18e-57;39!CL:0000234;2.18e-57;39!CL:0000576;3.46e-48;48!CL:0000766;2.96e-31;69!CL:0000763;1.89e-16;100!CL:0002087;2.64e-15;104!CL:0002393;1.23e-13;6!CL:0002397;1.23e-13;6!CL:0000738;9.33e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-96,42;CL:0002057,1.21e-96,42;CL:0000473,3.37e-84,48;CL:0000234,3.37e-84,48;CL:0002194,9.07e-67,59;CL:0000576,9.07e-67,59;CL:0000040,9.07e-67,59;CL:0000559,9.07e-67,59;CL:0002009,1.61e-64,61;CL:0000766,1.45e-59,72;CL:0000839,1.76e-59,66;CL:0000557,1.46e-58,67;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002087,4.73e-33,115;CL:0002031,1.48e-31,120;CL:0000738,2.76e-30,136;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0002393,2.87e-09,9;CL:0002397,2.87e-09,9;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.77e-68;42!CL:0000049;7.45e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.48e-33!80;UBERON:0002405!1.47e-31!115;UBERON:0002193!6.37e-31!112;UBERON:0001474!2.31e-30!86;UBERON:0002390!2.41e-29!102;UBERON:0003061!2.41e-29!102;UBERON:0004765!1.73e-24!101;UBERON:0001434!1.73e-24!101;UBERON:0003081!1.98e-17!216;UBERON:0002204!2.72e-11!167;UBERON:0000926!1.05e-09!448;UBERON:0004120!1.05e-09!448;UBERON:0006603!1.05e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-51,76;UBERON:0001474,1.98e-47,82;UBERON:0004765,5.46e-43,90;UBERON:0002405,1.61e-41,93;UBERON:0002390,2.89e-39,98;UBERON:0003061,2.89e-39,98;UBERON:0001434,2.00e-38,100;UBERON:0002193,2.24e-35,108;UBERON:0002204,7.92e-22,167;UBERON:0003081,2.15e-17,203;UBERON:0000926,5.14e-10,315;UBERON:0004120,5.14e-10,315;UBERON:0006603,5.14e-10,315;UBERON:0002384,5.20e-09,371 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,3.87796785972314,3.60980005446255,2.38711957787437,0,0,0,0.145398238779565,0,0.242584061187816,0.929716147622738,1.23350366406548,0.929119112685311,0.863077176966451,2.30544635876191,2.36482229888585,19.9952494827239,9.68227025375739,6.77132432971709,0.376484679085209,0,0.898893937780338,22.3441241430759,14.7627352455003,11.5080682643827,1.64925650093358,1.59570926097305,0,6.38460324982885,9.07816359505824,2.4912889959823,1.00499466102697,1.0429658368404,0.868755378820466,4.84319602106695,6.62899744777616,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0.805658634218294,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@MGC39372 | |||
}} | }} |
Latest revision as of 13:18, 17 September 2015
Short description: | p5@MGC39372 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MGC39372_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -106bp_to_ENST00000420981, ENST00000545177, NR_033851, uc003mud.2_5end |
EntrezGene: | MGC39372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.21e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-96 | 42 |
defensive cell | 3.37e-84 | 48 |
phagocyte | 3.37e-84 | 48 |
monopoietic cell | 9.07e-67 | 59 |
monocyte | 9.07e-67 | 59 |
monoblast | 9.07e-67 | 59 |
promonocyte | 9.07e-67 | 59 |
macrophage dendritic cell progenitor | 1.61e-64 | 61 |
myeloid leukocyte | 1.45e-59 | 72 |
myeloid lineage restricted progenitor cell | 1.76e-59 | 66 |
granulocyte monocyte progenitor cell | 1.46e-58 | 67 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
nongranular leukocyte | 4.73e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 1.48e-31 | 120 |
leukocyte | 2.76e-30 | 136 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
intermediate monocyte | 2.87e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.87e-09 | 9 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-51 | 76 |
bone element | 1.98e-47 | 82 |
skeletal element | 5.46e-43 | 90 |
immune system | 1.61e-41 | 93 |
hematopoietic system | 2.89e-39 | 98 |
blood island | 2.89e-39 | 98 |
skeletal system | 2.00e-38 | 100 |
hemolymphoid system | 2.24e-35 | 108 |
musculoskeletal system | 7.92e-22 | 167 |
lateral plate mesoderm | 2.15e-17 | 203 |
mesoderm | 5.14e-10 | 315 |
mesoderm-derived structure | 5.14e-10 | 315 |
presumptive mesoderm | 5.14e-10 | 315 |
connective tissue | 5.20e-09 | 371 |