FFCP PHASE1:Hg19::chr7:127764786..127764789,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:127764786..127764789,+ to FFCP PHASE1:Hg19::chr7:127764786..127764789,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:127764786..127764789,+ | |||
|description=CAGE_peak_at_chr7:127764786..127764789,+ | |||
|id=chr7:127764786..127764789,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.22e-11!52;CL:0000542!1.03e-10!53;CL:0000051!1.03e-10!53;CL:0002087!7.57e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.96e-18;3!CL:0000791;1.41e-11;18!CL:0000789;1.41e-11;18!CL:0002419;1.41e-11;18!CL:0000624;1.51e-09;6!CL:0000784;9.61e-09;3!CL:0000084;3.66e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.77e-18,3;CL:0000825,3.77e-18,3;CL:0000791,1.82e-11,18;CL:0000789,1.82e-11,18;CL:0002420,1.82e-11,18;CL:0002419,1.82e-11,18;CL:0000790,1.82e-11,18;CL:0000838,1.37e-09,52;CL:0000624,2.04e-09,6;CL:0000542,2.25e-09,53;CL:0000051,2.25e-09,53;CL:0000784,1.06e-08,3;CL:0000084,4.37e-08,25;CL:0000827,4.37e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.41e-11;18!UBERON:0000358;2.22e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.46e-23!235;DOID:14566!2.16e-22!239;DOID:0050687!5.93e-20!143;DOID:305!1.70e-14!106;DOID:0050686!2.80e-13!137;DOID:1749!2.07e-08!14;DOID:3119!1.39e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4362;9.36e-11;5!DOID:1749;6.36e-10;14!DOID:4960;5.60e-07;1!DOID:0070004;5.60e-07;1!DOID:3119;7.92e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,7.80e-11,5;DOID:1749,8.29e-10,14;DOID:4960,3.01e-07,1;DOID:0070004,3.01e-07,1;DOID:3119,7.58e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;4.83e-09;6!UBERON:0001560;4.83e-09;6!UBERON:0004913;2.22e-07;1!UBERON:0003703;2.22e-07;1!UBERON:0001174;2.22e-07;1!UBERON:0004914;2.22e-07;1!UBERON:0000997;5.60e-07;1!UBERON:0005056;5.60e-07;1!UBERON:0004176;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,4.15e-09,6;UBERON:0001560,4.15e-09,6;UBERON:0004913,2.10e-07,1;UBERON:0003703,2.10e-07,1;UBERON:0001174,2.10e-07,1;UBERON:0004914,2.10e-07,1;UBERON:0000997,9.18e-07,1;UBERON:0005056,9.18e-07,1 | |||
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| ||
|short_description=p@chr7:127764786..127764789,+ | |||
}} | }} |
Latest revision as of 05:44, 31 July 2015
Short description: | p@chr7:127764786..127764789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:127764786..127764789, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.77e-18 | 3 |
pro-NK cell | 3.77e-18 | 3 |
mature alpha-beta T cell | 1.82e-11 | 18 |
alpha-beta T cell | 1.82e-11 | 18 |
immature T cell | 1.82e-11 | 18 |
mature T cell | 1.82e-11 | 18 |
immature alpha-beta T cell | 1.82e-11 | 18 |
lymphoid lineage restricted progenitor cell | 1.37e-09 | 52 |
CD4-positive, alpha-beta T cell | 2.04e-09 | 6 |
lymphocyte | 2.25e-09 | 53 |
common lymphoid progenitor | 2.25e-09 | 53 |
plasmacytoid dendritic cell | 1.06e-08 | 3 |
T cell | 4.37e-08 | 25 |
pro-T cell | 4.37e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 4.15e-09 | 6 |
neck of organ | 4.15e-09 | 6 |
hepatopancreatic ampulla | 2.10e-07 | 1 |
extrahepatic bile duct | 2.10e-07 | 1 |
common bile duct | 2.10e-07 | 1 |
duodenal papilla | 2.10e-07 | 1 |
mammalian vulva | 9.18e-07 | 1 |
external female genitalia | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 7.80e-11 | 5 |
squamous cell carcinoma | 8.29e-10 | 14 |
bone marrow cancer | 3.01e-07 | 1 |
myeloma | 3.01e-07 | 1 |
gastrointestinal system cancer | 7.58e-07 | 14 |