FFCP PHASE1:Hg19::chr7:45017005..45017042,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:45017005..45017042,- to FFCP PHASE1:Hg19::chr7:45017005..45017042,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64005 | |EntrezGene=64005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13880 | |HGNC=13880 | ||
|TSSclassifier=strong | |||
|UniProt=B0I1T2 | |UniProt=B0I1T2 | ||
|association_with_transcript=-335bp_to_uc003tmi.1_5end | |||
|cluster_id=chr7:45017005..45017042,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_MYO1G_5end | |||
|id=chr7:45017005..45017042,- | |||
|ontology_enrichment_celltype=CL:0000988!8.54e-70!182;CL:0000037!8.67e-70!172;CL:0000566!8.67e-70!172;CL:0002032!1.22e-66!165;CL:0000837!1.22e-66!165;CL:0000738!9.34e-66!140;CL:0000860!4.90e-65!45;CL:0002057!7.96e-65!42;CL:0002087!5.33e-59!119;CL:0002031!3.08e-55!124;CL:0000763!1.43e-50!112;CL:0000049!1.43e-50!112;CL:0000766!2.28e-44!76;CL:0002009!2.24e-43!65;CL:0002194!4.51e-43!63;CL:0000576!4.51e-43!63;CL:0000040!4.51e-43!63;CL:0000559!4.51e-43!63;CL:0000557!6.02e-42!71;CL:0000839!8.98e-41!70;CL:0000134!1.68e-19!358;CL:0002320!1.25e-18!365;CL:0000219!3.49e-16!390;CL:0000084!3.11e-14!25;CL:0000827!3.11e-14!25;CL:0002393!3.72e-14!9;CL:0002397!3.72e-14!9;CL:0000838!4.14e-14!52;CL:0000542!1.06e-13!53;CL:0000051!1.06e-13!53;CL:0000048!5.45e-12!430;CL:0000034!6.71e-12!444;CL:0000723!1.73e-11!436;CL:0000791!7.43e-10!18;CL:0000789!7.43e-10!18;CL:0002420!7.43e-10!18;CL:0002419!7.43e-10!18;CL:0000790!7.43e-10!18;CL:0000080!1.67e-09!6;CL:0000624!2.36e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.90e-79;33!CL:0002057;2.90e-79;33!CL:0000576;1.52e-54;48!CL:0000473;2.45e-54;39!CL:0000234;2.45e-54;39!CL:0000766;9.36e-34;69!CL:0002087;1.33e-19;104!CL:0000763;1.18e-17;100!CL:0000738;1.27e-13;136!CL:0002393;3.98e-13;6!CL:0002397;3.98e-13;6!CL:0000988;3.67e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-102,42;CL:0002057,3.92e-102,42;CL:0000473,3.93e-88,48;CL:0000234,3.93e-88,48;CL:0002194,1.57e-68,59;CL:0000576,1.57e-68,59;CL:0000040,1.57e-68,59;CL:0000559,1.57e-68,59;CL:0002009,5.30e-66,61;CL:0000766,2.05e-64,72;CL:0000839,2.43e-60,66;CL:0000557,2.62e-59,67;CL:0002087,1.14e-52,115;CL:0000738,1.24e-51,136;CL:0000763,9.80e-47,108;CL:0000049,9.80e-47,108;CL:0002031,2.23e-45,120;CL:0000988,2.00e-44,177;CL:0000037,1.73e-43,168;CL:0002032,6.04e-42,161;CL:0000837,6.04e-42,161;CL:0002393,2.89e-16,9;CL:0002397,2.89e-16,9;CL:0000134,2.62e-14,354;CL:0002320,8.50e-14,361;CL:0000219,5.37e-12,386;CL:0000048,8.42e-10,427;CL:0000034,9.40e-10,441;CL:0000723,1.69e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-73;42!CL:0000049;3.66e-14;108 | |||
|ontology_enrichment_disease=DOID:1240!3.42e-07!39;DOID:2531!5.76e-07!51;DOID:0060083!5.76e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-47!102;UBERON:0003061!1.50e-47!102;UBERON:0002193!5.09e-43!112;UBERON:0002371!1.62e-35!80;UBERON:0001474!5.49e-32!86;UBERON:0002405!7.57e-27!115;UBERON:0004765!4.98e-25!101;UBERON:0001434!4.98e-25!101;UBERON:0002384!1.91e-17!375;UBERON:0003081!3.77e-14!216;UBERON:0002204!8.80e-10!167;UBERON:0000178!1.05e-08!15;UBERON:0000179!1.05e-08!15;UBERON:0000463!1.05e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.17e-51,76;UBERON:0002390,1.17e-49,98;UBERON:0003061,1.17e-49,98;UBERON:0001474,8.19e-47,82;UBERON:0002193,4.02e-44,108;UBERON:0002405,1.57e-42,93;UBERON:0004765,7.77e-42,90;UBERON:0001434,1.00e-36,100;UBERON:0003081,1.17e-18,203;UBERON:0002204,2.96e-18,167;UBERON:0002384,4.24e-13,371;UBERON:0000926,1.76e-08,315;UBERON:0004120,1.76e-08,315;UBERON:0006603,1.76e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.314843125254717,1.57345710739562,0.767658796194425,2.94150634300544,0,0,0,0,0,0,2.76997704265939,5.01361118675354,3.90619567288533,0,0,0,2.90796477559129,4.1566353805769,2.66842467306598,6.97287110717054,4.52284676824008,5.26500830521676,12.0830804775303,11.0149103807513,8.27687804610048,15.8583013138845,8.39130088658974,12.1883837934908,3.9530891303947,4.09359225086769,3.37085226667627,11.3251040177234,11.5534449747394,12.7867425159808,4.61791820261403,5.98390972864896,8.09827026012119,28.1502961469727,22.6954089876456,27.4041789558053,3.51748131359441,8.34372669472322,4.34377689410233,24.8213796079681,19.8869923433285,23.4182166706254,2.11255286311942,0.425208599930087,1.25795187305026,0.561643155732475,0.300353785683013,0,2.28010194992999,1.9891667719909,0.547992461293902,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0.263384084775077,0.983548850569165,0.786021525498329,1.43921049299656,1.33749196312542,0.32592226663359,0,0,2.56244050835899,1.17842362989935,0.221533894583621,1.08321545506006,3.71464827204458,3.51160238411671,0.328875809207352,0.552700035571697,0.579606171470105,0,0,1.04535523804977,1.0197840842781,1.14966148080576,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.473554504088034,0,0.201606743224732,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.394061520403854,0.431255149719035,1.28343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.37285620900479,1.70764092485511,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0.957526850661834,4.02179807175377,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.802940375518498,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.811367035427949,0.99921590399346,0,0,0,0,3.12041475976939,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0.984678443688556,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,2.6686901581256,1.48276726735803,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,12.0928182968485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03742326772554,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,1.30852315404675,0,0,0,6.19960927150283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.124149428591716,0.224263725161227,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.314843125254717,1.57345710739562,0.767658796194425,2.94150634300544,0,0,0,0,0,0,2.76997704265939,5.01361118675354,3.90619567288533,0,0,0,2.90796477559129,4.1566353805769,2.66842467306598,6.97287110717054,4.52284676824008,5.26500830521676,12.0830804775303,11.0149103807513,8.27687804610048,15.8583013138845,8.39130088658974,12.1883837934908,3.9530891303947,4.09359225086769,3.37085226667627,11.3251040177234,11.5534449747394,12.7867425159808,4.61791820261403,5.98390972864896,8.09827026012119,28.1502961469727,22.6954089876456,27.4041789558053,3.51748131359441,8.34372669472322,4.34377689410233,24.8213796079681,19.8869923433285,23.4182166706254,2.11255286311942,0.425208599930087,1.25795187305026,0.561643155732475,0.300353785683013,0,2.28010194992999,1.9891667719909,0.547992461293902,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0.263384084775077,0.983548850569165,0.786021525498329,1.43921049299656,1.33749196312542,0.32592226663359,0,0,2.56244050835899,1.17842362989935,0.221533894583621,1.08321545506006,3.71464827204458,3.51160238411671,0.328875809207352,0.552700035571697,0.579606171470105,0,0,1.04535523804977,1.0197840842781,1.14966148080576,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.473554504088034,0,0.201606743224732,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.394061520403854,0.431255149719035,1.28343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.37285620900479,1.70764092485511,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0.957526850661834,4.02179807175377,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.802940375518498,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.811367035427949,0.99921590399346,0,0,0,0,3.12041475976939,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0.984678443688556,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,2.6686901581256,1.48276726735803,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,12.0928182968485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03742326772554,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,1.30852315404675,0,0,0,6.19960927150283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.124149428591716,0.224263725161227,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p4@MYO1G | |||
}} | }} |
Latest revision as of 18:12, 18 September 2015
Short description: | p4@MYO1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYO1G_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -335bp_to_uc003tmi.1_5end |
EntrezGene: | MYO1G |
HGNC: | 13880 |
UniProt: | B0I1T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.92e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-102 | 42 |
defensive cell | 3.93e-88 | 48 |
phagocyte | 3.93e-88 | 48 |
monopoietic cell | 1.57e-68 | 59 |
monocyte | 1.57e-68 | 59 |
monoblast | 1.57e-68 | 59 |
promonocyte | 1.57e-68 | 59 |
macrophage dendritic cell progenitor | 5.30e-66 | 61 |
myeloid leukocyte | 2.05e-64 | 72 |
myeloid lineage restricted progenitor cell | 2.43e-60 | 66 |
granulocyte monocyte progenitor cell | 2.62e-59 | 67 |
nongranular leukocyte | 1.14e-52 | 115 |
leukocyte | 1.24e-51 | 136 |
myeloid cell | 9.80e-47 | 108 |
common myeloid progenitor | 9.80e-47 | 108 |
hematopoietic lineage restricted progenitor cell | 2.23e-45 | 120 |
hematopoietic cell | 2.00e-44 | 177 |
hematopoietic stem cell | 1.73e-43 | 168 |
hematopoietic oligopotent progenitor cell | 6.04e-42 | 161 |
hematopoietic multipotent progenitor cell | 6.04e-42 | 161 |
intermediate monocyte | 2.89e-16 | 9 |
CD14-positive, CD16-positive monocyte | 2.89e-16 | 9 |
mesenchymal cell | 2.62e-14 | 354 |
connective tissue cell | 8.50e-14 | 361 |
motile cell | 5.37e-12 | 386 |
multi fate stem cell | 8.42e-10 | 427 |
stem cell | 9.40e-10 | 441 |
somatic stem cell | 1.69e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.17e-51 | 76 |
hematopoietic system | 1.17e-49 | 98 |
blood island | 1.17e-49 | 98 |
bone element | 8.19e-47 | 82 |
hemolymphoid system | 4.02e-44 | 108 |
immune system | 1.57e-42 | 93 |
skeletal element | 7.77e-42 | 90 |
skeletal system | 1.00e-36 | 100 |
lateral plate mesoderm | 1.17e-18 | 203 |
musculoskeletal system | 2.96e-18 | 167 |
connective tissue | 4.24e-13 | 371 |
mesoderm | 1.76e-08 | 315 |
mesoderm-derived structure | 1.76e-08 | 315 |
presumptive mesoderm | 1.76e-08 | 315 |