FFCP PHASE1:Hg19::chr8:59571856..59571867,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:59571856..59571867,- to FFCP PHASE1:Hg19::chr8:59571856..59571867,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-83bp_to_ENST00000519871_5end | |||
|cluster_id=chr8:59571856..59571867,- | |||
|description=CAGE_peak_22_at_NSMAF_5end | |||
|id=chr8:59571856..59571867,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.12e-29;7!CL:0000586;8.12e-29;7!CL:0002543;3.14e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.87e-29,7;CL:0000586,7.87e-29,7;CL:0002543,2.07e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-20;10!UBERON:0005564;2.73e-20;10!UBERON:0005425;9.12e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.26e-09;22!DOID:2994;2.26e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.24e-09,22;DOID:2994,2.24e-09,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.88e-25;8!UBERON:0003135;1.78e-18;11!UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0000991;8.28e-10;21!UBERON:0003101;2.26e-09;22!UBERON:0000079;2.26e-09;22!UBERON:0003714;1.59e-07;2!UBERON:0001875;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2!UBERON:0006514;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.80e-25,8;UBERON:0003135,1.74e-18,11;UBERON:0000941,7.55e-14,1;UBERON:0001785,7.55e-14,1;UBERON:0002464,7.55e-14,1;UBERON:0004904,7.55e-14,1;UBERON:0001021,7.55e-14,1;UBERON:0003902,7.55e-14,1;UBERON:0005425,7.55e-14,1;UBERON:0000991,8.20e-10,21;UBERON:0009196,8.20e-10,21;UBERON:0009117,8.20e-10,21;UBERON:0005564,8.20e-10,21;UBERON:0004176,2.24e-09,22;UBERON:0003101,2.24e-09,22;UBERON:0000079,2.24e-09,22;UBERON:0003714,1.45e-07,2;UBERON:0005162,1.45e-07,2;UBERON:0000122,1.45e-07,2;UBERON:0001875,1.75e-07,2;UBERON:0006514,1.75e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.542270404062111,0.426507697462265,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0.598390972864896,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,1.10540007114339,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0.351339142772504,0.130979075497713,0,0,0,0.696518949197069,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0.714397826272638,0.673588117878509,0.337834441449967,1.53316637465883,1.89853131913626,0.549605231791222,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.620304078368662,0,0.213455115606889,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0.34444334449382,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.107420244868274,0,0.255679882248303,0,0.165284915360978,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.371606350251437,0,0.142283686696828,0,1.39705560002972,0,0,0,0,0.912938716132769,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,0.278406173895242,0,0.540911356951966,0.99921590399346,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0,0.994147647766298,0.422008249231538,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0.886642856860642,0.438770794307945,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0.941881538370149,0.332423363800313,0,0,0.167821586975843,0,0.635746315921515,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.208843899010911,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.126373159256976,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0.146178634172371,0,0,0.617792886840502,0,0,0.19871461170299,0.189932387867636,0,0,0,0,0,0.229073192331831,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0.104602846312333,0.101998217636322,0.866851769704557,1.20084057741958,0.547621515567972,0,0,0.262887354279314,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,0,1.16495949527454,0.157566364614447,0,0.26961417541674,0,0,0,0,0,0.412618309791701,0.415440338029185,0.674921674654501,0,0.242998226632099,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0.339936274560377,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0.414239055347196,0,0.197611631897944,0.243585196761792,0,0,0.2506898940227,0,0,0.157054096250234,0.886068179966986,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0.28546533354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| ||
|short_description=p22@NSMAF | |||
}} | }} |
Latest revision as of 15:43, 18 September 2015
Short description: | p22@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_NSMAF_5end |
Coexpression cluster: | NA |
Association with transcript: | -83bp_to_ENST00000519871_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.87e-29 | 7 |
germ cell | 7.87e-29 | 7 |
vein endothelial cell | 2.07e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 2.80e-25 | 8 |
male reproductive organ | 1.74e-18 | 11 |
cranial nerve II | 7.55e-14 | 1 |
cranial nerve | 7.55e-14 | 1 |
nerve trunk | 7.55e-14 | 1 |
nerve connecting eye with brain | 7.55e-14 | 1 |
nerve | 7.55e-14 | 1 |
retinal neural layer | 7.55e-14 | 1 |
presumptive neural retina | 7.55e-14 | 1 |
gonad | 8.20e-10 | 21 |
indifferent external genitalia | 8.20e-10 | 21 |
indifferent gonad | 8.20e-10 | 21 |
gonad primordium | 8.20e-10 | 21 |
external genitalia | 2.24e-09 | 22 |
male organism | 2.24e-09 | 22 |
male reproductive system | 2.24e-09 | 22 |
neural tissue | 1.45e-07 | 2 |
multi cell component structure | 1.45e-07 | 2 |
neuron projection bundle | 1.45e-07 | 2 |
globus pallidus | 1.75e-07 | 2 |
pallidum | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.24e-09 | 22 |
germ cell cancer | 2.24e-09 | 22 |