FFCP PHASE1:Hg19::chrX:109590174..109590203,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:109590174..109590203,- to FFCP PHASE1:Hg19::chrX:109590174..109590203,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24826 | |HGNC=24826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000372054_5end | |||
|cluster_id=chrX:109590174..109590203,- | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_GNG5P2_5end | |||
|id=chrX:109590174..109590203,- | |||
|ontology_enrichment_celltype=CL:0002057!4.65e-39!42;CL:0000860!2.40e-35!45;CL:0000839!9.02e-29!70;CL:0000557!9.16e-29!71;CL:0002009!1.04e-27!65;CL:0000766!8.28e-27!76;CL:0002194!8.56e-26!63;CL:0000576!8.56e-26!63;CL:0000040!8.56e-26!63;CL:0000559!8.56e-26!63;CL:0000763!2.50e-25!112;CL:0000049!2.50e-25!112;CL:0000738!2.93e-21!140;CL:0002031!2.42e-20!124;CL:0000037!8.47e-20!172;CL:0000566!8.47e-20!172;CL:0000988!2.99e-19!182;CL:0002032!3.09e-19!165;CL:0000837!3.09e-19!165;CL:0002087!3.17e-15!119;CL:0000034!2.51e-10!444;CL:0000048!4.22e-10!430;CL:0000723!7.81e-10!436;CL:0000134!5.97e-09!358;CL:0002320!1.32e-08!365;CL:0000219!1.03e-07!390;CL:0000453!5.15e-07!5;CL:0000003!5.56e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.24e-55;33!CL:0002057;3.24e-55;33!CL:0000473;1.13e-44;39!CL:0000234;1.13e-44;39!CL:0000576;6.76e-35;48!CL:0000766;5.73e-22;69!CL:0000763;4.80e-11;100!CL:0000453;5.94e-11;5!CL:0002087;2.65e-08;104!CL:0000738;2.79e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.18e-65,48;CL:0000234,1.18e-65,48;CL:0000860,2.77e-65,42;CL:0002057,2.77e-65,42;CL:0002009,2.32e-53,61;CL:0002194,7.86e-50,59;CL:0000576,7.86e-50,59;CL:0000040,7.86e-50,59;CL:0000559,7.86e-50,59;CL:0000557,2.00e-47,67;CL:0000839,3.08e-43,66;CL:0000766,4.83e-43,72;CL:0000763,1.53e-35,108;CL:0000049,1.53e-35,108;CL:0000738,9.33e-28,136;CL:0002031,1.69e-24,120;CL:0002087,2.95e-23,115;CL:0000037,1.01e-22,168;CL:0002032,3.54e-22,161;CL:0000837,3.54e-22,161;CL:0000988,8.75e-21,177;CL:0000034,1.72e-11,441;CL:0000048,2.16e-11,427;CL:0000453,4.97e-11,5;CL:0000723,5.85e-11,433;CL:0000134,7.50e-10,354;CL:0002320,2.44e-09,361;CL:0000219,4.38e-09,386;CL:0002393,1.26e-07,9;CL:0002397,1.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.60e-47;42!CL:0000049;2.31e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.45e-26!80;UBERON:0001474!7.52e-24!86;UBERON:0004765!2.27e-21!101;UBERON:0001434!2.27e-21!101;UBERON:0002390!1.31e-19!102;UBERON:0003061!1.31e-19!102;UBERON:0002193!3.37e-18!112;UBERON:0002405!2.35e-17!115;UBERON:0002204!2.20e-14!167;UBERON:0001737!7.27e-09!9;UBERON:0002384!5.65e-08!375;UBERON:0003081!1.13e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.26e-07;9!UBERON:0001557;5.26e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-44,76;UBERON:0001474,3.58e-40,82;UBERON:0002405,1.42e-37,93;UBERON:0004765,3.46e-37,90;UBERON:0001434,4.27e-32,100;UBERON:0002390,2.06e-31,98;UBERON:0003061,2.06e-31,98;UBERON:0002193,2.07e-30,108;UBERON:0002204,1.24e-22,167;UBERON:0003081,2.84e-14,203;UBERON:0002384,1.21e-08,371;UBERON:0000926,9.55e-08,315;UBERON:0004120,9.55e-08,315;UBERON:0006603,9.55e-08,315;UBERON:0001737,4.67e-07,9 | |||
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| ||
|short_description=p1@GNG5P2 | |||
}} | }} |
Latest revision as of 00:59, 19 September 2015
Short description: | p1@GNG5P2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG5P2_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000372054_5end |
EntrezGene: | NA |
HGNC: | 24826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-44 | 76 |
bone element | 3.58e-40 | 82 |
immune system | 1.42e-37 | 93 |
skeletal element | 3.46e-37 | 90 |
skeletal system | 4.27e-32 | 100 |
hematopoietic system | 2.06e-31 | 98 |
blood island | 2.06e-31 | 98 |
hemolymphoid system | 2.07e-30 | 108 |
musculoskeletal system | 1.24e-22 | 167 |
lateral plate mesoderm | 2.84e-14 | 203 |
connective tissue | 1.21e-08 | 371 |
mesoderm | 9.55e-08 | 315 |
mesoderm-derived structure | 9.55e-08 | 315 |
presumptive mesoderm | 9.55e-08 | 315 |
larynx | 4.67e-07 | 9 |