FFCP PHASE1:Hg19::chrX:147133528..147133532,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:147133528..147133532,+ to FFCP PHASE1:Hg19::chrX:147133528..147133532,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=3995 | |HGNC=3995 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-220bp_to_ENST00000498161_5end | |||
|cluster_id=chrX:147133528..147133532,+ | |||
|coexpression_cluster_id=C1424 | |||
|description=CAGE_peak_1_at_FTH1P8_5end | |||
|id=chrX:147133528..147133532,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.95e-25!76;CL:0002057!8.87e-25!42;CL:0000860!1.78e-24!45;CL:0000839!1.99e-23!70;CL:0000557!1.74e-22!71;CL:0002009!2.55e-22!65;CL:0002194!8.62e-22!63;CL:0000576!8.62e-22!63;CL:0000040!8.62e-22!63;CL:0000559!8.62e-22!63;CL:0000763!3.29e-13!112;CL:0000049!3.29e-13!112;CL:0000003!4.09e-13!722;CL:0000048!2.83e-10!430;CL:0000034!7.32e-10!444;CL:0000723!1.67e-09!436;CL:0002371!5.38e-09!591;CL:0000144!7.94e-08!625;CL:0000012!6.54e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.95e-20;33!CL:0002057;7.95e-20;33!CL:0000473;3.57e-19;39!CL:0000234;3.57e-19;39!CL:0000576;5.37e-14;48!CL:0000766;2.56e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.64e-28,48;CL:0000234,6.64e-28,48;CL:0000766,1.03e-25,72;CL:0000860,8.80e-25,42;CL:0002057,8.80e-25,42;CL:0000839,1.02e-23,66;CL:0000557,9.88e-23,67;CL:0002009,1.10e-22,61;CL:0002194,3.63e-22,59;CL:0000576,3.63e-22,59;CL:0000040,3.63e-22,59;CL:0000559,3.63e-22,59;CL:0000763,3.71e-13,108;CL:0000049,3.71e-13,108;CL:0000048,2.80e-10,427;CL:0000034,7.53e-10,441;CL:0000723,1.71e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.86e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.40e-21!80;UBERON:0002204!8.65e-19!167;UBERON:0001474!8.50e-18!86;UBERON:0004765!3.85e-17!101;UBERON:0001434!3.85e-17!101;UBERON:0002193!1.67e-15!112;UBERON:0002405!4.61e-15!115;UBERON:0002390!5.03e-15!102;UBERON:0003061!5.03e-15!102;UBERON:0003081!6.22e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.36e-21,76;UBERON:0002204,4.37e-19,167;UBERON:0004765,5.08e-19,90;UBERON:0001474,9.03e-18,82;UBERON:0001434,3.54e-17,100;UBERON:0002405,9.82e-17,93;UBERON:0002193,2.40e-15,108;UBERON:0002390,6.92e-15,98;UBERON:0003061,6.92e-15,98;UBERON:0003081,2.97e-11,203;UBERON:0000926,5.00e-09,315;UBERON:0004120,5.00e-09,315;UBERON:0006603,5.00e-09,315 | |||
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| ||
|short_description=p1@FTH1P8 | |||
}} | }} |
Latest revision as of 20:27, 19 September 2015
Short description: | p1@FTH1P8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTH1P8_5end |
Coexpression cluster: | C1424_Monocytederived_CD14_mesenchymal_serous_Aortic_Lymphatic_Olfactory |
Association with transcript: | -220bp_to_ENST00000498161_5end |
EntrezGene: | NA |
HGNC: | 3995 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.64e-28 | 48 |
phagocyte | 6.64e-28 | 48 |
myeloid leukocyte | 1.03e-25 | 72 |
classical monocyte | 8.80e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.80e-25 | 42 |
myeloid lineage restricted progenitor cell | 1.02e-23 | 66 |
granulocyte monocyte progenitor cell | 9.88e-23 | 67 |
macrophage dendritic cell progenitor | 1.10e-22 | 61 |
monopoietic cell | 3.63e-22 | 59 |
monocyte | 3.63e-22 | 59 |
monoblast | 3.63e-22 | 59 |
promonocyte | 3.63e-22 | 59 |
myeloid cell | 3.71e-13 | 108 |
common myeloid progenitor | 3.71e-13 | 108 |
multi fate stem cell | 2.80e-10 | 427 |
stem cell | 7.53e-10 | 441 |
somatic stem cell | 1.71e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.36e-21 | 76 |
musculoskeletal system | 4.37e-19 | 167 |
skeletal element | 5.08e-19 | 90 |
bone element | 9.03e-18 | 82 |
skeletal system | 3.54e-17 | 100 |
immune system | 9.82e-17 | 93 |
hemolymphoid system | 2.40e-15 | 108 |
hematopoietic system | 6.92e-15 | 98 |
blood island | 6.92e-15 | 98 |
lateral plate mesoderm | 2.97e-11 | 203 |
mesoderm | 5.00e-09 | 315 |
mesoderm-derived structure | 5.00e-09 | 315 |
presumptive mesoderm | 5.00e-09 | 315 |