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(Created page with "{{f5samples |id=FF:10603-108E9 |name=embryonic pancreas cell line:2C6, biol_rep1 |sample_id=10603 |rna_tube_id=108E9 |rna_box=108 |rna_position=E9 |sample_cell_lot= |s...")
 
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{{f5samples
{{f5samples
|id=FF:10603-108E9
|DRA_sample_Accession=CAGE@SAMD00004815
|name=embryonic pancreas cell line:2C6, biol_rep1
|accession_numbers=CAGE;DRX007875;DRR008747;DRZ000172;DRZ001557;DRZ011522;DRZ012907
|sample_id=10603
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001264,UBERON:0002100,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949
|rna_tube_id=108E9
|rna_box=108
|rna_position=E9
|sample_cell_lot=
|sample_cell_catalog=RCB0794
|sample_company=RIKEN Bioresource centre
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=pancreas
|sample_donor(cell lot)=
|sample_sex=unknown
|sample_age=19 week embryo
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=2.08000
|rna_od260/280=2.17000
|sample_cell_type=unclassifiable
|sample_cell_line=2C6
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=36.59749
|rna_concentration=0.77867
|sample_note=
|profile_hcage=CNhs11814,LSID829,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000160,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0001007,UBERON:0001041,UBERON:0001045,UBERON:0001048,UBERON:0001062,UBERON:0001264,UBERON:0001555,UBERON:0002050,UBERON:0002075,UBERON:0002100,UBERON:0002108,UBERON:0002114,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003104,UBERON:0003921,UBERON:0003922,UBERON:0003923,UBERON:0003924,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004458,UBERON:0004921,UBERON:0005177,UBERON:0005409,UBERON:0005423,UBERON:0007026,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100669
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr3:12330560..12330579,+!p1@PPARG!1.81!72.88!PPARG;;chr20:55204351..55204377,+!p1@TFAP2C!1.69!60.93!TFAP2C;;chr2:172967621..172967637,-!p1@DLX2!1.42!66.90!DLX2;;chr12:66218598..66218645,+!p2@HMGA2!1.39!105.14!HMGA2;;chr6:126240380..126240430,+!p2@NCOA7!1.37!57.35!NCOA7;;chr6:10415484..10415508,-!p3@TFAP2A!1.37!22.70!TFAP2A;;chr20:42543441..42543497,+!p1@TOX2!1.35!93.19!TOX2;;chr20:42543506..42543549,+!p2@TOX2!1.33!47.79!TOX2;;chr6:34204921..34204939,+!p3@HMGA1!1.32!578.25!HMGA1;;chr17:41622925..41622976,-!p3@ETV4!1.31!28.67!ETV4;;chr12:66218836..66218888,+!p1@HMGA2!1.28!163.68!HMGA2;;chr8:10588010..10588030,-!p1@SOX7!1.28!17.92!SOX7;;chr11:65667884..65667895,-!p2@FOSL1!1.26!65.71!FOSL1;;chr21:38071430..38071456,+!p1@SIM2!1.25!16.73!SIM2;;chr12:27485785..27485816,+!p1@ARNTL2!1.23!109.91!ARNTL2;;chr6:126240442..126240459,+!p4@NCOA7!1.23!20.31!NCOA7;;chr16:86600426..86600441,+!p1@FOXC2!1.22!38.23!FOXC2;;chr2:45168997..45169020,+!p4@SIX3!1.22!15.53!SIX3;;chr6:10412600..10412637,-!p1@TFAP2A!1.21!25.09!TFAP2A;;chr9:124976185..124976212,-!p4@LHX6!1.19!14.34!LHX6;;chr2:45168834..45168847,+!p2@SIX3!1.19!14.34!SIX3;;chr8:67525443..67525459,-!p2@MYBL1!1.16!20.31!MYBL1;;chr15:67418119..67418162,+!p5@SMAD3!1.14!14.34!SMAD3;;chr17:70117153..70117174,+!p1@SOX9!1.13!127.84!SOX9;;chr6:10412392..10412409,-!p4@TFAP2A!1.13!14.34!TFAP2A;;chr20:55205791..55205817,+!p3@TFAP2C!1.11!11.95!TFAP2C;;chr17:41623692..41623715,-!p1@ETV4!1.09!48.98!ETV4;;chr11:65686732..65686756,+!p2@DRAP1!1.08!46.59!DRAP1;;chr9:110252035..110252057,-!p1@KLF4!1.05!164.87!KLF4;;chr11:65667846..65667868,-!p1@FOSL1!1.02!252.09!FOSL1;;chr12:66218573..66218596,+!p7@HMGA2!1.02!14.34!HMGA2;;chr14:61116183..61116208,-!p1@SIX1!1.01!35.84!SIX1;;chr3:157823517..157823562,-!p1@SHOX2!1.00!9.56!SHOX2;;chr6:10415276..10415341,-!p2@TFAP2A!0.99!10.75!TFAP2A;;chr12:27485823..27485868,+!p2@ARNTL2!0.97!34.65!ARNTL2;;chr11:61520075..61520136,+!p1@C11orf9!0.97!17.92!C11orf9;;chr12:66218378..66218401,+!p6@HMGA2!0.97!13.14!HMGA2;;chr13:45009301..45009320,-!p7@TSC22D1!0.97!8.36!TSC22D1;;chr2:176969228..176969260,+!p1@HOXD11!0.97!8.36!HOXD11;;chr15:67418099..67418118,+!p16@SMAD3!0.97!8.36!SMAD3;;chr17:41622731..41622764,-!p5@ETV4!0.97!8.36!ETV4;;chr17:46682321..46682362,-!p1@HOXB6!0.97!8.36!HOXB6;;chr2:101436564..101436647,+!p1@NPAS2!0.96!172.04!NPAS2;;chr2:200323414..200323455,-!p1@SATB2!0.96!17.92!SATB2;;chr12:19592405..19592492,+!p2@AEBP2!0.94!68.10!AEBP2;;chr17:46687959..46688007,-!p2@HOXB7!0.94!10.75!HOXB7;;chr12:66218003..66218018,+!p9@HMGA2!0.94!9.56!HMGA2;;chr6:85473156..85473210,-!p2@TBX18!0.94!9.56!TBX18;;chr3:12329358..12329393,+!p3@PPARG!0.93!19.12!PPARG;;chr15:67418047..67418093,+!p4@SMAD3!0.93!9.56!SMAD3;;chr15:96869511..96869525,+!p16@NR2F2!0.93!8.36!NR2F2;;chr6:34204672..34204692,+!p1@HMGA1!0.92!866.18!HMGA1;;chr12:19592602..19592648,+!p1@AEBP2!0.92!88.41!AEBP2;;chr3:12329397..12329433,+!p2@PPARG!0.91!16.73!PPARG;;chr9:14314106..14314119,-!p5@NFIB!0.91!13.14!NFIB;;chr3:169381420..169381535,-!p1@MECOM!0.91!8.36!MECOM;;chr2:172950227..172950249,+!p2@DLX1!0.91!7.17!DLX1;;chr6:34210478..34210481,+!p8@HMGA1!0.91!7.17!HMGA1;;chr9:124976154..124976177,-!p5@LHX6!0.91!7.17!LHX6;;chr17:48046543..48046575,+!p2@DLX4!0.91!7.17!DLX4;;chr9:129376201..129376225,+!p1@LMX1B!0.91!7.17!LMX1B;;chr17:41622765..41622821,-!p2@ETV4!0.90!10.75!ETV4;;chr1:120190761..120190782,-!p2@ZNF697!0.89!9.56!ZNF697;;chr7:26191809..26191890,+!p1@NFE2L3!0.88!34.65!NFE2L3;;chr8:103665947..103665981,-!p3@KLF10!0.88!9.56!KLF10;;chr10:104155659..104155676,+!p4@NFKB2!0.88!8.36!NFKB2;;chr12:27485762..27485776,+!p3@ARNTL2!0.87!17.92!ARNTL2;;chr17:79885633..79885645,-!p4@MAFG!0.86!10.75!MAFG;;chr20:32274179..32274213,-!p1@E2F1!0.85!43.01!E2F1;;chr6:1389789..1389821,+!p1@FOXF2!0.84!8.36!FOXF2;;chr10:8096772..8096787,+!p2@GATA3!0.84!7.17!GATA3;;chr19:4153613..4153652,+!p1@CREB3L3!0.84!5.97!CREB3L3;;chr15:67391010..67391046,+!p13@SMAD3!0.84!5.97!SMAD3;;chr17:48045917..48045977,+!p1@DLX4!0.84!5.97!DLX4;;chr2:100721328..100721348,-!p4@AFF3!0.84!5.97!AFF3;;chr2:176969179..176969226,+!p2@HOXD11!0.84!5.97!HOXD11;;chr2:45168959..45168990,+!p6@SIX3!0.84!5.97!SIX3;;chr8:11561684..11561751,+!p1@GATA4!0.84!5.97!GATA4;;chr5:180288248..180288291,-!p1@ZFP62!0.83!38.23!ZFP62;;chr17:41622834..41622883,-!p6@ETV4!0.83!7.17!ETV4;;chr2:200322654..200322707,-!p2@SATB2!0.82!8.36!SATB2;;chr12:96588368..96588394,+!p3@ELK3!0.81!15.53!ELK3;;chr11:47279504..47279563,+!p1@NR1H3!0.81!13.14!NR1H3;;chr1:25256756..25256774,-!p1@RUNX3!0.81!10.75!RUNX3;;chr11:67007535..67007546,+!p7@KDM2A!0.81!8.36!KDM2A;;chr12:66218443..66218461,+!p8@HMGA2!0.81!7.17!HMGA2;;chr13:45010939..45011033,-!p1@TSC22D1!0.80!378.73!TSC22D1;;chr12:124873357..124873401,-!p1@NCOR2!0.80!66.90!NCOR2;;chr3:141868357..141868393,-!p3@TFDP2!0.80!38.23!TFDP2;;chr5:178487354..178487408,+!p1@ZNF354C!0.80!16.73!ZNF354C;;chr6:126240463..126240489,+!p6@NCOA7!0.80!5.97!NCOA7;;chr22:22863052..22863133,-!p1@ZNF280B!0.79!14.34!ZNF280B;;chr3:185826855..185826911,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|fonse_cell_line=FF:0100669
|fonse_cell_line=FF:0100669
|fonse_cell_line_closure=FF:0100669
|fonse_cell_line_closure=FF:0100669
Line 67: Line 39:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg38.nobarcode.ctss.bed.gz
|id=FF:10603-108E9
|is_a=EFO:0002091;;FF:0000210;;FF:0100669;;UBERON:0001264
|is_obsolete=
|library_id=CNhs11814
|library_id_phase_based=2:CNhs11814
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10603
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10603
|name=embryonic pancreas cell line:2C6
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11814,LSID829,release010,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0.34137997173303,-0.241973256871817,0.098518923547233,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,0.208423381954168,0,0,0,0,0,0,0,0,0,0,0,0,-0.145899716966013,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186586199614288,0,0,0,0.205618476286652,-0.0405074168293536,0,0,0,0,-0.0980353512377064,0.0322127850656199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.0545073476822096,-0.336915820592028,0,0,0,0,0,0
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|rna_box=108
|rna_catalog_number=
|rna_concentration=0.77867
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.08
|rna_od260/280=2.17
|rna_position=E9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.08E+11
|rna_weight_ug=36.59749
|sample_age=19 week embryo
|sample_category=cell lines
|sample_cell_catalog=RCB0794
|sample_cell_line=2C6
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.00478285358822e-246!GO:0043226;organelle;3.26515728701351e-199!GO:0043229;intracellular organelle;1.10128998491474e-198!GO:0043231;intracellular membrane-bound organelle;4.43555212404833e-193!GO:0043227;membrane-bound organelle;6.37382573861709e-193!GO:0005737;cytoplasm;1.10185029414206e-168!GO:0044422;organelle part;1.44537922947428e-142!GO:0044446;intracellular organelle part;3.30800908822144e-141!GO:0044444;cytoplasmic part;6.68792858052215e-108!GO:0032991;macromolecular complex;1.4266797193183e-104!GO:0005634;nucleus;1.05121990093905e-95!GO:0044237;cellular metabolic process;2.87479627021163e-93!GO:0044238;primary metabolic process;1.01471465893075e-90!GO:0043170;macromolecule metabolic process;4.22774670122031e-89!GO:0030529;ribonucleoprotein complex;8.96856946632583e-88!GO:0044428;nuclear part;4.93380851845477e-87!GO:0003723;RNA binding;1.02988870096537e-81!GO:0043233;organelle lumen;7.353240901734e-79!GO:0031974;membrane-enclosed lumen;7.353240901734e-79!GO:0005515;protein binding;1.19037330151041e-74!GO:0043283;biopolymer metabolic process;5.50147888184513e-57!GO:0005739;mitochondrion;3.07503374497714e-56!GO:0006396;RNA processing;7.09447724850976e-56!GO:0031981;nuclear lumen;6.44756765420142e-55!GO:0016043;cellular component organization and biogenesis;1.70822630753751e-54!GO:0043234;protein complex;7.17998498918389e-53!GO:0006412;translation;2.6920141859936e-52!GO:0010467;gene expression;4.47107801265451e-51!GO:0005840;ribosome;8.62551516479635e-51!GO:0019538;protein metabolic process;1.65020152636085e-50!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.23151684861964e-50!GO:0044260;cellular macromolecule metabolic process;2.82447421631866e-46!GO:0044267;cellular protein metabolic process;5.06783113406103e-46!GO:0003735;structural constituent of ribosome;9.15650042911093e-45!GO:0016071;mRNA metabolic process;9.07439010409527e-44!GO:0031090;organelle membrane;3.68401118222159e-41!GO:0033036;macromolecule localization;3.81867923004925e-41!GO:0043228;non-membrane-bound organelle;1.40627893031401e-40!GO:0043232;intracellular non-membrane-bound organelle;1.40627893031401e-40!GO:0015031;protein transport;2.05413382556685e-40!GO:0008380;RNA splicing;7.933055555618e-39!GO:0009059;macromolecule biosynthetic process;9.75200611482368e-39!GO:0033279;ribosomal subunit;1.27938355043671e-38!GO:0006259;DNA metabolic process;2.89517244273633e-38!GO:0044249;cellular biosynthetic process;2.3733591556039e-37!GO:0045184;establishment of protein localization;4.87753203975849e-37!GO:0008104;protein localization;6.34554198168556e-37!GO:0006397;mRNA processing;1.12617448969322e-36!GO:0009058;biosynthetic process;1.78519771272267e-36!GO:0031967;organelle envelope;9.38611814807832e-36!GO:0031975;envelope;1.12739958949736e-35!GO:0044429;mitochondrial part;2.79933852122736e-35!GO:0005829;cytosol;3.46128735447647e-35!GO:0006996;organelle organization and biogenesis;1.48088044565214e-34!GO:0046907;intracellular transport;7.3408364624358e-34!GO:0005654;nucleoplasm;1.45553039760264e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.78297157372523e-33!GO:0000166;nucleotide binding;4.07152859513585e-33!GO:0065003;macromolecular complex assembly;1.80136905456697e-32!GO:0003676;nucleic acid binding;4.24412875752912e-30!GO:0022607;cellular component assembly;2.1283448576603e-28!GO:0044451;nucleoplasm part;6.40781978805822e-28!GO:0005681;spliceosome;1.7534241656886e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.33937796664788e-27!GO:0006886;intracellular protein transport;8.93498746242379e-27!GO:0007049;cell cycle;3.4257657590934e-26!GO:0016462;pyrophosphatase activity;1.03917067225937e-25!GO:0017111;nucleoside-triphosphatase activity;1.85360432517948e-25!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.17894659526585e-25!GO:0016817;hydrolase activity, acting on acid anhydrides;2.79362887985673e-25!GO:0016070;RNA metabolic process;1.35729022109268e-24!GO:0051649;establishment of cellular localization;2.06174145487738e-24!GO:0051641;cellular localization;8.10518005931515e-24!GO:0005730;nucleolus;9.31818122049145e-24!GO:0017076;purine nucleotide binding;5.7504522032255e-23!GO:0032553;ribonucleotide binding;7.23991030633829e-23!GO:0032555;purine ribonucleotide binding;7.23991030633829e-23!GO:0044445;cytosolic part;3.76134579192753e-22!GO:0005740;mitochondrial envelope;5.27209191664122e-22!GO:0019866;organelle inner membrane;6.18354384655491e-22!GO:0008134;transcription factor binding;6.70782723074017e-21!GO:0031966;mitochondrial membrane;1.51167741509133e-20!GO:0015934;large ribosomal subunit;1.54532055745982e-20!GO:0005524;ATP binding;2.31742600301151e-20!GO:0032559;adenyl ribonucleotide binding;3.61117717523315e-20!GO:0006457;protein folding;3.78503335133257e-20!GO:0005743;mitochondrial inner membrane;4.305949806426e-20!GO:0030554;adenyl nucleotide binding;4.46695354821283e-20!GO:0006974;response to DNA damage stimulus;2.09633183778747e-19!GO:0015935;small ribosomal subunit;3.88015208147218e-19!GO:0006512;ubiquitin cycle;1.90593579320444e-18!GO:0022402;cell cycle process;1.92424673164094e-18!GO:0006119;oxidative phosphorylation;2.13092359039051e-18!GO:0016874;ligase activity;2.58952025041566e-18!GO:0022618;protein-RNA complex assembly;3.46221648958498e-18!GO:0005694;chromosome;5.2978264436076e-18!GO:0012505;endomembrane system;1.1458709176196e-17!GO:0016887;ATPase activity;2.36789209338968e-17!GO:0044265;cellular macromolecule catabolic process;2.6040796408926e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.88267742679441e-17!GO:0051276;chromosome organization and biogenesis;3.45689143898031e-17!GO:0043285;biopolymer catabolic process;4.03427690360033e-17!GO:0006281;DNA repair;4.24848949111573e-17!GO:0019941;modification-dependent protein catabolic process;5.16407862845771e-17!GO:0043632;modification-dependent macromolecule catabolic process;5.16407862845771e-17!GO:0044257;cellular protein catabolic process;7.99697579926008e-17!GO:0042623;ATPase activity, coupled;8.05796764622668e-17!GO:0006366;transcription from RNA polymerase II promoter;1.07041477866561e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.23590263878332e-16!GO:0044455;mitochondrial membrane part;2.19815635695044e-16!GO:0031980;mitochondrial lumen;3.23261618186953e-16!GO:0005759;mitochondrial matrix;3.23261618186953e-16!GO:0042254;ribosome biogenesis and assembly;4.04170176787602e-16!GO:0000278;mitotic cell cycle;6.1289195057217e-16!GO:0043412;biopolymer modification;9.40789966004606e-16!GO:0008135;translation factor activity, nucleic acid binding;1.13816315333189e-15!GO:0006260;DNA replication;2.04314186495691e-15!GO:0051082;unfolded protein binding;2.57974283197174e-15!GO:0016604;nuclear body;3.13298867491847e-15!GO:0009057;macromolecule catabolic process;6.123831415115e-15!GO:0044427;chromosomal part;6.44353033667457e-15!GO:0006605;protein targeting;1.01454956701736e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.58635198208938e-14!GO:0000375;RNA splicing, via transesterification reactions;1.58635198208938e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.58635198208938e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.65006519480802e-14!GO:0030163;protein catabolic process;1.78556567762823e-14!GO:0005635;nuclear envelope;2.50663434434844e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;2.99355333158001e-14!GO:0000502;proteasome complex (sensu Eukaryota);5.73417144469481e-14!GO:0005761;mitochondrial ribosome;5.73417144469481e-14!GO:0000313;organellar ribosome;5.73417144469481e-14!GO:0004386;helicase activity;6.18615480896414e-14!GO:0048770;pigment granule;8.16351753534653e-14!GO:0042470;melanosome;8.16351753534653e-14!GO:0044453;nuclear membrane part;8.85971290993858e-14!GO:0005746;mitochondrial respiratory chain;1.26160067091054e-13!GO:0031965;nuclear membrane;1.56801372076071e-13!GO:0006323;DNA packaging;1.62496315598736e-13!GO:0006464;protein modification process;1.65343689764027e-13!GO:0003712;transcription cofactor activity;1.65343689764027e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.18697088923413e-13!GO:0051301;cell division;2.29637335279028e-13!GO:0006913;nucleocytoplasmic transport;2.655782857022e-13!GO:0009719;response to endogenous stimulus;4.03167498558401e-13!GO:0051169;nuclear transport;5.25931921704834e-13!GO:0048193;Golgi vesicle transport;6.16657324712642e-13!GO:0008026;ATP-dependent helicase activity;6.26537583703505e-13!GO:0050136;NADH dehydrogenase (quinone) activity;7.60930555527703e-13!GO:0003954;NADH dehydrogenase activity;7.60930555527703e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.60930555527703e-13!GO:0016192;vesicle-mediated transport;9.31549490735446e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.12215316741464e-12!GO:0005643;nuclear pore;1.70422880896481e-12!GO:0051186;cofactor metabolic process;2.39420541523181e-12!GO:0043687;post-translational protein modification;3.38771259061863e-12!GO:0044248;cellular catabolic process;5.03067090882037e-12!GO:0005794;Golgi apparatus;7.58582712514709e-12!GO:0000087;M phase of mitotic cell cycle;9.15141161860661e-12!GO:0016607;nuclear speck;1.28352854247302e-11!GO:0007067;mitosis;1.93758645382692e-11!GO:0022403;cell cycle phase;1.93758645382692e-11!GO:0003743;translation initiation factor activity;2.8451285194471e-11!GO:0006403;RNA localization;2.8451285194471e-11!GO:0051726;regulation of cell cycle;3.07825547484281e-11!GO:0006399;tRNA metabolic process;3.59232761262979e-11!GO:0042775;organelle ATP synthesis coupled electron transport;3.81282836227422e-11!GO:0042773;ATP synthesis coupled electron transport;3.81282836227422e-11!GO:0050657;nucleic acid transport;3.8875958757308e-11!GO:0051236;establishment of RNA localization;3.8875958757308e-11!GO:0050658;RNA transport;3.8875958757308e-11!GO:0012501;programmed cell death;4.69839439163712e-11!GO:0000074;regulation of progression through cell cycle;5.55696448666963e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.64749585214645e-11!GO:0045271;respiratory chain complex I;6.64749585214645e-11!GO:0005747;mitochondrial respiratory chain complex I;6.64749585214645e-11!GO:0016568;chromatin modification;6.79435575288192e-11!GO:0005783;endoplasmic reticulum;6.9993072806837e-11!GO:0006915;apoptosis;8.85739125507037e-11!GO:0044432;endoplasmic reticulum part;9.87837886210386e-11!GO:0006364;rRNA processing;1.11887784260629e-10!GO:0046930;pore complex;1.45666148977165e-10!GO:0006446;regulation of translational initiation;1.76063407575295e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.90840539382827e-10!GO:0050794;regulation of cellular process;2.47494205004853e-10!GO:0006413;translational initiation;3.1745084099214e-10!GO:0016072;rRNA metabolic process;3.30585048892091e-10!GO:0008219;cell death;4.21761139680662e-10!GO:0016265;death;4.21761139680662e-10!GO:0000785;chromatin;9.53606839518673e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.55682799168566e-10!GO:0006732;coenzyme metabolic process;9.7650307594432e-10!GO:0008639;small protein conjugating enzyme activity;1.11071597650469e-09!GO:0006461;protein complex assembly;1.38011761338941e-09!GO:0006333;chromatin assembly or disassembly;1.57402905852035e-09!GO:0017038;protein import;1.7218813646593e-09!GO:0000279;M phase;1.81268751628947e-09!GO:0048523;negative regulation of cellular process;1.87530100643378e-09!GO:0015630;microtubule cytoskeleton;1.87530100643378e-09!GO:0005793;ER-Golgi intermediate compartment;2.03920648261833e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.03920648261833e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.03920648261833e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.03920648261833e-09!GO:0004842;ubiquitin-protein ligase activity;2.35615584729425e-09!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.22062774483741e-09!GO:0043038;amino acid activation;3.63579728395106e-09!GO:0006418;tRNA aminoacylation for protein translation;3.63579728395106e-09!GO:0043039;tRNA aminoacylation;3.63579728395106e-09!GO:0051028;mRNA transport;3.74081327927783e-09!GO:0065002;intracellular protein transport across a membrane;4.38042314130055e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.39286902406315e-09!GO:0005813;centrosome;5.00313502045809e-09!GO:0019787;small conjugating protein ligase activity;5.60298810871864e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.93786683483724e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.51461774408414e-08!GO:0016563;transcription activator activity;1.52438602064475e-08!GO:0005815;microtubule organizing center;1.72517694220948e-08!GO:0065004;protein-DNA complex assembly;1.7425620827748e-08!GO:0008565;protein transporter activity;1.88923236157818e-08!GO:0005768;endosome;2.88538924223122e-08!GO:0051246;regulation of protein metabolic process;2.88538924223122e-08!GO:0016881;acid-amino acid ligase activity;2.99181481903208e-08!GO:0005667;transcription factor complex;3.5237439752095e-08!GO:0043566;structure-specific DNA binding;3.80998365881527e-08!GO:0048519;negative regulation of biological process;4.45346057487241e-08!GO:0000245;spliceosome assembly;4.546279449225e-08!GO:0009259;ribonucleotide metabolic process;5.78185909380364e-08!GO:0006163;purine nucleotide metabolic process;6.53662981487235e-08!GO:0016740;transferase activity;7.60070326803854e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.49342938208241e-08!GO:0006261;DNA-dependent DNA replication;8.65430798146809e-08!GO:0051188;cofactor biosynthetic process;1.21013541296499e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.36673039365915e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.47991811610037e-07!GO:0006164;purine nucleotide biosynthetic process;1.47991811610037e-07!GO:0051170;nuclear import;1.5710545383459e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.57322901364382e-07!GO:0009055;electron carrier activity;1.98407306330381e-07!GO:0005789;endoplasmic reticulum membrane;2.13900074338515e-07!GO:0016564;transcription repressor activity;2.16197299157284e-07!GO:0009260;ribonucleotide biosynthetic process;2.1727285763297e-07!GO:0009150;purine ribonucleotide metabolic process;2.1727285763297e-07!GO:0003724;RNA helicase activity;2.68661685827783e-07!GO:0019829;cation-transporting ATPase activity;2.91083476979604e-07!GO:0016779;nucleotidyltransferase activity;2.92684723219513e-07!GO:0031324;negative regulation of cellular metabolic process;3.23146698493172e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.23854444253885e-07!GO:0006606;protein import into nucleus;4.31374319846324e-07!GO:0007005;mitochondrion organization and biogenesis;4.55154569936833e-07!GO:0009152;purine ribonucleotide biosynthetic process;4.90192121599421e-07!GO:0015986;ATP synthesis coupled proton transport;5.07072523001524e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.07072523001524e-07!GO:0032446;protein modification by small protein conjugation;5.27488366639916e-07!GO:0003713;transcription coactivator activity;5.29969198648146e-07!GO:0050789;regulation of biological process;7.70008959268023e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.87245512866429e-07!GO:0006888;ER to Golgi vesicle-mediated transport;9.87676015705895e-07!GO:0043067;regulation of programmed cell death;9.91796684748457e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.91796684748457e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.91796684748457e-07!GO:0003924;GTPase activity;1.09669773155799e-06!GO:0016481;negative regulation of transcription;1.10914643916003e-06!GO:0003697;single-stranded DNA binding;1.1219813394634e-06!GO:0003682;chromatin binding;1.18115442394014e-06!GO:0042981;regulation of apoptosis;1.203580321055e-06!GO:0009141;nucleoside triphosphate metabolic process;1.28428827522953e-06!GO:0043623;cellular protein complex assembly;1.29658699651736e-06!GO:0016567;protein ubiquitination;1.39052406424216e-06!GO:0019222;regulation of metabolic process;1.45529645020325e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.50138388322546e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.50138388322546e-06!GO:0016787;hydrolase activity;1.93719271364669e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.95935784021627e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.95935784021627e-06!GO:0006754;ATP biosynthetic process;2.71961990412909e-06!GO:0006753;nucleoside phosphate metabolic process;2.71961990412909e-06!GO:0003714;transcription corepressor activity;2.74335238171687e-06!GO:0046034;ATP metabolic process;2.81516934686927e-06!GO:0009108;coenzyme biosynthetic process;3.16622036384286e-06!GO:0009892;negative regulation of metabolic process;3.21295424529002e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.335206506551e-06!GO:0006793;phosphorus metabolic process;4.41370126596549e-06!GO:0006796;phosphate metabolic process;4.41370126596549e-06!GO:0009060;aerobic respiration;4.5448610607443e-06!GO:0000151;ubiquitin ligase complex;4.5801589898558e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.5801589898558e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.62116110299795e-06!GO:0009056;catabolic process;5.01573329266571e-06!GO:0003899;DNA-directed RNA polymerase activity;5.14493251129384e-06!GO:0051427;hormone receptor binding;5.68812614348047e-06!GO:0044431;Golgi apparatus part;5.9063633131836e-06!GO:0006752;group transfer coenzyme metabolic process;7.16029731709307e-06!GO:0005819;spindle;8.43034071848937e-06!GO:0016469;proton-transporting two-sector ATPase complex;9.29923062728508e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.00272217580024e-05!GO:0008186;RNA-dependent ATPase activity;1.03023380438304e-05!GO:0035257;nuclear hormone receptor binding;1.32548909873395e-05!GO:0045259;proton-transporting ATP synthase complex;1.3751012792882e-05!GO:0030120;vesicle coat;1.52175834211895e-05!GO:0030662;coated vesicle membrane;1.52175834211895e-05!GO:0005762;mitochondrial large ribosomal subunit;1.65571737007286e-05!GO:0000315;organellar large ribosomal subunit;1.65571737007286e-05!GO:0043069;negative regulation of programmed cell death;1.76572346481507e-05!GO:0044440;endosomal part;2.04085887538765e-05!GO:0010008;endosome membrane;2.04085887538765e-05!GO:0005769;early endosome;2.3069632943628e-05!GO:0008094;DNA-dependent ATPase activity;2.64803342049791e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.71122976952707e-05!GO:0019899;enzyme binding;2.83014894969653e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.92059241032641e-05!GO:0000314;organellar small ribosomal subunit;2.92290048726322e-05!GO:0005763;mitochondrial small ribosomal subunit;2.92290048726322e-05!GO:0005788;endoplasmic reticulum lumen;3.45283441390985e-05!GO:0004004;ATP-dependent RNA helicase activity;3.51212728766533e-05!GO:0006334;nucleosome assembly;3.635122656206e-05!GO:0051329;interphase of mitotic cell cycle;3.78753805836185e-05!GO:0031497;chromatin assembly;3.78753805836185e-05!GO:0043066;negative regulation of apoptosis;4.43566970058964e-05!GO:0006916;anti-apoptosis;4.76904224658904e-05!GO:0006402;mRNA catabolic process;4.87647156512197e-05!GO:0008654;phospholipid biosynthetic process;4.93732506121926e-05!GO:0051168;nuclear export;5.16259095914743e-05!GO:0005525;GTP binding;5.16931633296311e-05!GO:0000775;chromosome, pericentric region;5.1938194635567e-05!GO:0005657;replication fork;5.21713774701574e-05!GO:0045333;cellular respiration;5.58216888253233e-05!GO:0043021;ribonucleoprotein binding;5.74135684157819e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.80140285600949e-05!GO:0044452;nucleolar part;6.18208703265365e-05!GO:0045786;negative regulation of progression through cell cycle;6.20471647895254e-05!GO:0003690;double-stranded DNA binding;7.46827261345708e-05!GO:0016310;phosphorylation;7.89273673667145e-05!GO:0006613;cotranslational protein targeting to membrane;7.89273673667145e-05!GO:0051325;interphase;7.98917089467122e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.13644987357365e-05!GO:0000139;Golgi membrane;8.92407956304982e-05!GO:0048475;coated membrane;8.92407956304982e-05!GO:0030117;membrane coat;8.92407956304982e-05!GO:0048522;positive regulation of cellular process;9.01759280968103e-05!GO:0031072;heat shock protein binding;9.42362052150763e-05!GO:0006099;tricarboxylic acid cycle;0.000123362062314065!GO:0046356;acetyl-CoA catabolic process;0.000123362062314065!GO:0009117;nucleotide metabolic process;0.000125872149320628!GO:0000075;cell cycle checkpoint;0.000132289059276476!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000137889405386199!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000142084159973788!GO:0004298;threonine endopeptidase activity;0.000145089824967525!GO:0045941;positive regulation of transcription;0.000171657029801781!GO:0048471;perinuclear region of cytoplasm;0.000199750331987442!GO:0031323;regulation of cellular metabolic process;0.000200610979469904!GO:0006084;acetyl-CoA metabolic process;0.000200706493550311!GO:0045893;positive regulation of transcription, DNA-dependent;0.000201437888040661!GO:0009109;coenzyme catabolic process;0.000222700325003824!GO:0007243;protein kinase cascade;0.000224790821655375!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00024564743251099!GO:0000049;tRNA binding;0.000250560284761585!GO:0005770;late endosome;0.000258576514348484!GO:0045045;secretory pathway;0.000281642448969692!GO:0051187;cofactor catabolic process;0.000288374701105723!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000291836936841737!GO:0016741;transferase activity, transferring one-carbon groups;0.000299463050774956!GO:0006401;RNA catabolic process;0.000303958296687309!GO:0007051;spindle organization and biogenesis;0.000308665701685593!GO:0051052;regulation of DNA metabolic process;0.000315392789303419!GO:0005048;signal sequence binding;0.000329130959174424!GO:0031988;membrane-bound vesicle;0.00033899733073985!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000352744273647733!GO:0015399;primary active transmembrane transporter activity;0.000352744273647733!GO:0016853;isomerase activity;0.000358702291714851!GO:0006350;transcription;0.000358702291714851!GO:0016023;cytoplasmic membrane-bound vesicle;0.000370752083487823!GO:0016363;nuclear matrix;0.000389749682246179!GO:0006383;transcription from RNA polymerase III promoter;0.000406705839139289!GO:0008168;methyltransferase activity;0.000422616983102186!GO:0003702;RNA polymerase II transcription factor activity;0.000426929679633241!GO:0031252;leading edge;0.000430664574787051!GO:0030880;RNA polymerase complex;0.000468871687439978!GO:0032561;guanyl ribonucleotide binding;0.000478421431995127!GO:0019001;guanyl nucleotide binding;0.000478421431995127!GO:0006302;double-strand break repair;0.000484821393144523!GO:0003729;mRNA binding;0.000530000236350187!GO:0016197;endosome transport;0.00054645085804198!GO:0000776;kinetochore;0.000564647758128838!GO:0007264;small GTPase mediated signal transduction;0.000662032153588347!GO:0005885;Arp2/3 protein complex;0.000674282185142654!GO:0065007;biological regulation;0.000676725167904135!GO:0065009;regulation of a molecular function;0.000683180635651377!GO:0045892;negative regulation of transcription, DNA-dependent;0.000698229130016721!GO:0008361;regulation of cell size;0.000769146204640425!GO:0006352;transcription initiation;0.000820930969236029!GO:0032508;DNA duplex unwinding;0.000832594250808972!GO:0032392;DNA geometric change;0.000832594250808972!GO:0042802;identical protein binding;0.000890696366482224!GO:0015631;tubulin binding;0.000893365002402424!GO:0051252;regulation of RNA metabolic process;0.000909077820495295!GO:0045454;cell redox homeostasis;0.000934220784178944!GO:0008033;tRNA processing;0.000946495819139634!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000974559918510438!GO:0008022;protein C-terminus binding;0.00103344263354688!GO:0030867;rough endoplasmic reticulum membrane;0.00114138844392884!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00120346744328862!GO:0000428;DNA-directed RNA polymerase complex;0.00120346744328862!GO:0006310;DNA recombination;0.00120382742934244!GO:0003678;DNA helicase activity;0.0012259881138126!GO:0016859;cis-trans isomerase activity;0.0012268316035744!GO:0051789;response to protein stimulus;0.0012268316035744!GO:0006986;response to unfolded protein;0.0012268316035744!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00124542392886466!GO:0043492;ATPase activity, coupled to movement of substances;0.0012480977351947!GO:0016272;prefoldin complex;0.00127650038150356!GO:0031982;vesicle;0.00127650038150356!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00129014710216897!GO:0008139;nuclear localization sequence binding;0.00129916145513718!GO:0000059;protein import into nucleus, docking;0.00136309800425876!GO:0005798;Golgi-associated vesicle;0.00136933048072995!GO:0005874;microtubule;0.00139098494002181!GO:0016049;cell growth;0.0014304546512186!GO:0004674;protein serine/threonine kinase activity;0.00146808607575519!GO:0006414;translational elongation;0.00152629858470313!GO:0001558;regulation of cell growth;0.00160300826058658!GO:0006284;base-excision repair;0.00160924404121256!GO:0031410;cytoplasmic vesicle;0.00167158585176672!GO:0008250;oligosaccharyl transferase complex;0.00168354490835927!GO:0004576;oligosaccharyl transferase activity;0.00178352347860142!GO:0006268;DNA unwinding during replication;0.00183497050256472!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0019002094376671!GO:0006405;RNA export from nucleus;0.00200418124121573!GO:0006338;chromatin remodeling;0.00204193399566461!GO:0003711;transcription elongation regulator activity;0.00205883149093794!GO:0051087;chaperone binding;0.00214149439287924!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00220892020810017!GO:0010468;regulation of gene expression;0.00230288170830343!GO:0006892;post-Golgi vesicle-mediated transport;0.00233032887229002!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00248658971049307!GO:0006839;mitochondrial transport;0.00256687136340807!GO:0046474;glycerophospholipid biosynthetic process;0.00261974205996538!GO:0003684;damaged DNA binding;0.00283550030915328!GO:0004527;exonuclease activity;0.00295125932600981!GO:0006091;generation of precursor metabolites and energy;0.00295125932600981!GO:0033116;ER-Golgi intermediate compartment membrane;0.00298261014351655!GO:0015980;energy derivation by oxidation of organic compounds;0.00302313879581337!GO:0003746;translation elongation factor activity;0.00307859338309027!GO:0046467;membrane lipid biosynthetic process;0.00309306919331259!GO:0043681;protein import into mitochondrion;0.00316213375911635!GO:0019843;rRNA binding;0.00318157460340533!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00332073761148587!GO:0046966;thyroid hormone receptor binding;0.00375067797816923!GO:0046983;protein dimerization activity;0.00379218980960977!GO:0043488;regulation of mRNA stability;0.00386269658344244!GO:0043487;regulation of RNA stability;0.00386269658344244!GO:0048487;beta-tubulin binding;0.00386269658344244!GO:0051101;regulation of DNA binding;0.00389729597656863!GO:0006818;hydrogen transport;0.00411854779638765!GO:0007088;regulation of mitosis;0.00424789880316741!GO:0016251;general RNA polymerase II transcription factor activity;0.00437977776410926!GO:0006626;protein targeting to mitochondrion;0.0045074592024027!GO:0005773;vacuole;0.0047269294952052!GO:0031901;early endosome membrane;0.00482145919601105!GO:0048500;signal recognition particle;0.00482145919601105!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00482145919601105!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00483869432018425!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00483869432018425!GO:0030521;androgen receptor signaling pathway;0.00485020820566358!GO:0035258;steroid hormone receptor binding;0.00485938517911987!GO:0015992;proton transport;0.0050219372952939!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00544599432800466!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00544599432800466!GO:0030132;clathrin coat of coated pit;0.00545578809414451!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00545578809414451!GO:0015002;heme-copper terminal oxidase activity;0.00545578809414451!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00545578809414451!GO:0004129;cytochrome-c oxidase activity;0.00545578809414451!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00551814589004707!GO:0048518;positive regulation of biological process;0.00554908826647544!GO:0007010;cytoskeleton organization and biogenesis;0.00569732701690644!GO:0009893;positive regulation of metabolic process;0.00570481538805074!GO:0000792;heterochromatin;0.00585467753861938!GO:0043284;biopolymer biosynthetic process;0.00590040565928105!GO:0009165;nucleotide biosynthetic process;0.00593233691734818!GO:0031968;organelle outer membrane;0.00594824766596697!GO:0019867;outer membrane;0.00601698775812244!GO:0006417;regulation of translation;0.00630436828288098!GO:0046489;phosphoinositide biosynthetic process;0.00646440269878511!GO:0018196;peptidyl-asparagine modification;0.00704498471328081!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00704498471328081!GO:0030176;integral to endoplasmic reticulum membrane;0.00714853406821596!GO:0043022;ribosome binding;0.00720089892859454!GO:0007030;Golgi organization and biogenesis;0.00729474560765331!GO:0017166;vinculin binding;0.00734927232956104!GO:0006607;NLS-bearing substrate import into nucleus;0.00744841829800145!GO:0006376;mRNA splice site selection;0.00748160576517721!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00748160576517721!GO:0040008;regulation of growth;0.00753285544318885!GO:0008632;apoptotic program;0.00757403379129858!GO:0006611;protein export from nucleus;0.00764692246147171!GO:0006275;regulation of DNA replication;0.00779264456479388!GO:0000922;spindle pole;0.00791154806889417!GO:0006612;protein targeting to membrane;0.00795357577207977!GO:0016044;membrane organization and biogenesis;0.00798651857524538!GO:0006289;nucleotide-excision repair;0.00807593218285366!GO:0008312;7S RNA binding;0.00815433141383533!GO:0043624;cellular protein complex disassembly;0.00842190885687895!GO:0005684;U2-dependent spliceosome;0.00850440671439247!GO:0008047;enzyme activator activity;0.00851533757066174!GO:0007059;chromosome segregation;0.00899841666781167!GO:0008234;cysteine-type peptidase activity;0.00909429022557253!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00917537575971091!GO:0008629;induction of apoptosis by intracellular signals;0.00934664192720659!GO:0005637;nuclear inner membrane;0.00935655267839814!GO:0040029;regulation of gene expression, epigenetic;0.00935655267839814!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00935655267839814!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00935655267839814!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00935655267839814!GO:0007052;mitotic spindle organization and biogenesis;0.00943762109229855!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00943762109229855!GO:0033673;negative regulation of kinase activity;0.00945669159549738!GO:0006469;negative regulation of protein kinase activity;0.00945669159549738!GO:0005741;mitochondrial outer membrane;0.0094760588385122!GO:0032940;secretion by cell;0.00952442947712588!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00961780373642135!GO:0000786;nucleosome;0.0097524883515315!GO:0006950;response to stress;0.00987903058928616!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00987903058928616!GO:0050662;coenzyme binding;0.00987903058928616!GO:0030658;transport vesicle membrane;0.0101425389176965!GO:0031625;ubiquitin protein ligase binding;0.0102783963588747!GO:0006497;protein amino acid lipidation;0.0105371715712219!GO:0008287;protein serine/threonine phosphatase complex;0.0109320224832858!GO:0007093;mitotic cell cycle checkpoint;0.0109694431303492!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0119397791403414!GO:0032774;RNA biosynthetic process;0.0120880841280025!GO:0030036;actin cytoskeleton organization and biogenesis;0.0125332356366462!GO:0007006;mitochondrial membrane organization and biogenesis;0.0127517723190761!GO:0031124;mRNA 3'-end processing;0.0131034007505643!GO:0022415;viral reproductive process;0.0133167038221854!GO:0006595;polyamine metabolic process;0.0134804628400637!GO:0031326;regulation of cellular biosynthetic process;0.0139671034099716!GO:0006891;intra-Golgi vesicle-mediated transport;0.0141009075412748!GO:0006351;transcription, DNA-dependent;0.0141367311516731!GO:0003725;double-stranded RNA binding;0.0143377411562801!GO:0000323;lytic vacuole;0.0145511937725225!GO:0005764;lysosome;0.0145511937725225!GO:0005832;chaperonin-containing T-complex;0.0145686189919604!GO:0048468;cell development;0.0146157641166775!GO:0032984;macromolecular complex disassembly;0.0147044974929139!GO:0022890;inorganic cation transmembrane transporter activity;0.0147947362402394!GO:0030134;ER to Golgi transport vesicle;0.0149268729988331!GO:0004532;exoribonuclease activity;0.0151109268688836!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0151109268688836!GO:0006270;DNA replication initiation;0.0152011061884217!GO:0007265;Ras protein signal transduction;0.0154523903323744!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0154523903323744!GO:0045047;protein targeting to ER;0.0154523903323744!GO:0030518;steroid hormone receptor signaling pathway;0.0154523903323744!GO:0032259;methylation;0.015495347217008!GO:0008017;microtubule binding;0.0156650282181966!GO:0009116;nucleoside metabolic process;0.0166720595458978!GO:0030660;Golgi-associated vesicle membrane;0.0166885403331439!GO:0000178;exosome (RNase complex);0.0169027503099983!GO:0019783;small conjugating protein-specific protease activity;0.0169686986764694!GO:0005905;coated pit;0.0169760475247223!GO:0050790;regulation of catalytic activity;0.0170373347132141!GO:0046822;regulation of nucleocytoplasmic transport;0.017476203192991!GO:0004722;protein serine/threonine phosphatase activity;0.0177179298954575!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0180718198337783!GO:0046483;heterocycle metabolic process;0.0180726795860664!GO:0031325;positive regulation of cellular metabolic process;0.0184286505332596!GO:0000910;cytokinesis;0.0184344691029231!GO:0042770;DNA damage response, signal transduction;0.0185117204184083!GO:0006354;RNA elongation;0.0185117204184083!GO:0043189;H4/H2A histone acetyltransferase complex;0.018582926364464!GO:0000123;histone acetyltransferase complex;0.018582926364464!GO:0051098;regulation of binding;0.0188227411676628!GO:0007004;telomere maintenance via telomerase;0.0190217465899173!GO:0006730;one-carbon compound metabolic process;0.0197675766049816!GO:0007017;microtubule-based process;0.0200747577909849!GO:0016791;phosphoric monoester hydrolase activity;0.0200747577909849!GO:0031123;RNA 3'-end processing;0.0202308004269774!GO:0051348;negative regulation of transferase activity;0.0205719787345227!GO:0048037;cofactor binding;0.0207909031581898!GO:0050681;androgen receptor binding;0.0210857623944884!GO:0043241;protein complex disassembly;0.0210857623944884!GO:0030127;COPII vesicle coat;0.0210857623944884!GO:0012507;ER to Golgi transport vesicle membrane;0.0210857623944884!GO:0005669;transcription factor TFIID complex;0.0212336742250057!GO:0043596;nuclear replication fork;0.021662252207884!GO:0000228;nuclear chromosome;0.0217100576149404!GO:0030118;clathrin coat;0.0217100576149404!GO:0044450;microtubule organizing center part;0.0217511859135324!GO:0009889;regulation of biosynthetic process;0.021806587832897!GO:0022406;membrane docking;0.0221471633004177!GO:0048278;vesicle docking;0.0221471633004177!GO:0005791;rough endoplasmic reticulum;0.0232736545511169!GO:0004843;ubiquitin-specific protease activity;0.0233293837353476!GO:0016311;dephosphorylation;0.0233421816262431!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0234112247429398!GO:0006458;'de novo' protein folding;0.0234112247429398!GO:0051084;'de novo' posttranslational protein folding;0.0234112247429398!GO:0030133;transport vesicle;0.0235686111904966!GO:0043414;biopolymer methylation;0.02399787753222!GO:0000725;recombinational repair;0.0240168294304434!GO:0000724;double-strand break repair via homologous recombination;0.0240168294304434!GO:0008538;proteasome activator activity;0.0242767656387881!GO:0005862;muscle thin filament tropomyosin;0.0245698324064129!GO:0007346;regulation of progression through mitotic cell cycle;0.0248133513774806!GO:0007040;lysosome organization and biogenesis;0.0248452071719385!GO:0043549;regulation of kinase activity;0.0249506885581796!GO:0032200;telomere organization and biogenesis;0.0251872329343426!GO:0000723;telomere maintenance;0.0251872329343426!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0255697988774716!GO:0006144;purine base metabolic process;0.0257420781095964!GO:0000082;G1/S transition of mitotic cell cycle;0.0258322832646726!GO:0005732;small nucleolar ribonucleoprotein complex;0.0262222656347516!GO:0051338;regulation of transferase activity;0.0263051099458406!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0263670534357964!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0263670534357964!GO:0031057;negative regulation of histone modification;0.0263940029993185!GO:0035067;negative regulation of histone acetylation;0.0263940029993185!GO:0030125;clathrin vesicle coat;0.0270694452521172!GO:0030665;clathrin coated vesicle membrane;0.0270694452521172!GO:0030027;lamellipodium;0.0271982079674846!GO:0008637;apoptotic mitochondrial changes;0.0273168064993395!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0274418848397585!GO:0042158;lipoprotein biosynthetic process;0.0275755608537391!GO:0008408;3'-5' exonuclease activity;0.027752781941529!GO:0004177;aminopeptidase activity;0.027752781941529!GO:0000118;histone deacetylase complex;0.0280342001311805!GO:0051287;NAD binding;0.0280342001311805!GO:0016301;kinase activity;0.028616967688203!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0288197952388413!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0297053438952226!GO:0008286;insulin receptor signaling pathway;0.0299789496692369!GO:0000209;protein polyubiquitination;0.0301713645079421!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0309632603298815!GO:0009451;RNA modification;0.031302602412905!GO:0005096;GTPase activator activity;0.032330285665318!GO:0016491;oxidoreductase activity;0.0324429992597016!GO:0005083;small GTPase regulator activity;0.0331204425046339!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.033767434295879!GO:0007242;intracellular signaling cascade;0.0340851816256298!GO:0050178;phenylpyruvate tautomerase activity;0.0341520915794663!GO:0004721;phosphoprotein phosphatase activity;0.0342235321874606!GO:0042393;histone binding;0.0345122578301058!GO:0016584;nucleosome positioning;0.0347163069423815!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0353476166767139!GO:0051053;negative regulation of DNA metabolic process;0.0353476166767139!GO:0035267;NuA4 histone acetyltransferase complex;0.0354307964669814!GO:0006506;GPI anchor biosynthetic process;0.0354307964669814!GO:0031371;ubiquitin conjugating enzyme complex;0.0357126416602285!GO:0030029;actin filament-based process;0.0359127746686785!GO:0004003;ATP-dependent DNA helicase activity;0.0362024081651477!GO:0006360;transcription from RNA polymerase I promoter;0.0362043580510777!GO:0005876;spindle microtubule;0.0363891989241328!GO:0030911;TPR domain binding;0.0370782768326062!GO:0006650;glycerophospholipid metabolic process;0.0377370750592457!GO:0048144;fibroblast proliferation;0.0381138135450327!GO:0048145;regulation of fibroblast proliferation;0.0381138135450327!GO:0006505;GPI anchor metabolic process;0.0384948437247137!GO:0006904;vesicle docking during exocytosis;0.0384948437247137!GO:0035035;histone acetyltransferase binding;0.0385217828524013!GO:0032906;transforming growth factor-beta2 production;0.038623491137802!GO:0032909;regulation of transforming growth factor-beta2 production;0.038623491137802!GO:0006984;ER-nuclear signaling pathway;0.038623491137802!GO:0007021;tubulin folding;0.0391827084471267!GO:0009303;rRNA transcription;0.0396778634403594!GO:0051539;4 iron, 4 sulfur cluster binding;0.0399961518727425!GO:0007050;cell cycle arrest;0.0418107809722037!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.041833743657403!GO:0045449;regulation of transcription;0.0419726456365446!GO:0030833;regulation of actin filament polymerization;0.0421996814502868!GO:0008276;protein methyltransferase activity;0.0429238538015509!GO:0016790;thiolester hydrolase activity;0.0430146698576377!GO:0009112;nucleobase metabolic process;0.0430833964475834!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.043242614796336!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0439681553830588!GO:0006520;amino acid metabolic process;0.0443498025768423!GO:0045792;negative regulation of cell size;0.0446580621296984!GO:0031902;late endosome membrane;0.0447914836589979!GO:0004680;casein kinase activity;0.0452609364965642!GO:0043407;negative regulation of MAP kinase activity;0.0452609364965642!GO:0009396;folic acid and derivative biosynthetic process;0.0453135744401694!GO:0030522;intracellular receptor-mediated signaling pathway;0.0461394975414688!GO:0006378;mRNA polyadenylation;0.0462596715275047!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0465213698884643!GO:0000175;3'-5'-exoribonuclease activity;0.0465213698884643!GO:0019904;protein domain specific binding;0.0465213698884643!GO:0005869;dynactin complex;0.0465651935801716!GO:0004518;nuclease activity;0.0465651935801716!GO:0006541;glutamine metabolic process;0.0466923501658476!GO:0031461;cullin-RING ubiquitin ligase complex;0.0471988175438308!GO:0004221;ubiquitin thiolesterase activity;0.0474222366015023!GO:0008092;cytoskeletal protein binding;0.0477168423692019!GO:0000287;magnesium ion binding;0.0480579705677953!GO:0043550;regulation of lipid kinase activity;0.0480579705677953!GO:0030659;cytoplasmic vesicle membrane;0.0488065918084032!GO:0000738;DNA catabolic process, exonucleolytic;0.0490514104493448!GO:0022411;cellular component disassembly;0.0498163803945588!GO:0047485;protein N-terminus binding;0.0498163803945588!GO:0004239;methionyl aminopeptidase activity;0.0498256557576281!GO:0045859;regulation of protein kinase activity;0.0498859733510842
|sample_id=10603
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=pancreas
|top_motifs=FOXQ1:2.34089613867;PAX8:1.59787344818;RORA:1.1750863936;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.16498918786;POU1F1:1.15258191936;RBPJ:0.980318502177;ONECUT1,2:0.893879372681;bHLH_family:0.854518545106;FOX{F1,F2,J1}:0.853841189314;PAX1,9:0.847008321051;POU6F1:0.814186854527;NANOG:0.812235474758;ALX1:0.802702673266;FOX{I1,J2}:0.793982633285;STAT5{A,B}:0.742904589309;FOXD3:0.677852369026;PDX1:0.673001845384;GLI1..3:0.583689877324;CEBPA,B_DDIT3:0.574381803696;ADNP_IRX_SIX_ZHX:0.550516944813;NFE2L2:0.53887873772;PAX4:0.521699869747;BPTF:0.519679540127;E2F1..5:0.513472482583;VSX1,2:0.503477906876;EGR1..3:0.485826514528;BREu{core}:0.47003553196;NFIX:0.46553159524;LEF1_TCF7_TCF7L1,2:0.46530344005;PRRX1,2:0.462234255831;RXR{A,B,G}:0.437950917335;FOS_FOS{B,L1}_JUN{B,D}:0.435207159563;HOX{A5,B5}:0.416474062662;OCT4_SOX2{dimer}:0.411644290463;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.411274541738;TFAP2B:0.399685550516;FOXA2:0.383718057002;TFAP2{A,C}:0.380030545049;NKX2-1,4:0.374352067433;SOX17:0.354619778225;POU5F1:0.346186328206;NR5A1,2:0.32167418885;LHX3,4:0.306539031687;ZNF423:0.293518239695;RXRA_VDR{dimer}:0.288790151858;ZNF143:0.287407623452;TLX1..3_NFIC{dimer}:0.27144178393;NR3C1:0.270910411902;NFE2:0.261996999376;ZFP161:0.261691202045;ZNF148:0.258096016323;NFIL3:0.253061010446;GATA6:0.248312837199;NR1H4:0.21859281061;HES1:0.214606974752;HOX{A6,A7,B6,B7}:0.205999564053;NRF1:0.204881423804;PITX1..3:0.195198132483;AHR_ARNT_ARNT2:0.190393239172;TBX4,5:0.181202340361;NR6A1:0.178623835529;XCPE1{core}:0.178623789224;BACH2:0.172432071215;ATF4:0.169445289223;PAX5:0.168295597228;TP53:0.166163388272;ELK1,4_GABP{A,B1}:0.1538063492;HNF4A_NR2F1,2:0.145938743441;HLF:0.130878303677;CUX2:0.128944749518;RFX1:0.125257692421;MYB:0.110035178189;EN1,2:0.106619214341;HNF1A:0.0919620213198;CDC5L:0.0909850614541;MYOD1:0.0853883731232;FOSL2:0.0623083828374;AIRE:0.0598319455756;ESR1:0.057554249649;NFKB1_REL_RELA:0.0228689771179;TFDP1:0.0216308020781;IRF7:0.00631240969645;NKX3-1:0.00413087198326;HIC1:-0.00474281735581;SNAI1..3:-0.00663945216411;IKZF2:-0.0111159557028;TEAD1:-0.0190512282886;PRDM1:-0.0268103543939;ZBTB16:-0.0335955952235;YY1:-0.0343723367453;PATZ1:-0.0392388422065;POU2F1..3:-0.0564594177945;FOXP1:-0.0642959228415;SOX5:-0.078065705041;REST:-0.0797420613352;SP1:-0.091286078729;PAX2:-0.096911285239;ETS1,2:-0.103084185274;T:-0.10824262657;ZEB1:-0.111216203428;TEF:-0.113044695391;TAL1_TCF{3,4,12}:-0.114040152911;GTF2I:-0.114043636264;PBX1:-0.118110608241;GTF2A1,2:-0.11834611812;SOX{8,9,10}:-0.123262049961;MED-1{core}:-0.131106005188;FOX{D1,D2}:-0.156419393762;HOXA9_MEIS1:-0.166209694785;ATF2:-0.181575124389;ELF1,2,4:-0.190227444917;ZBTB6:-0.191512535953;MTF1:-0.200885016895;PAX3,7:-0.22432905634;PPARG:-0.232298995395;AR:-0.240760612637;HOX{A4,D4}:-0.242975291751;MEF2{A,B,C,D}:-0.250335461883;NKX2-3_NKX2-5:-0.252604366258;SPIB:-0.255991621196;TFAP4:-0.260046090282;TFCP2:-0.27005707131;NFY{A,B,C}:-0.28085643803;NHLH1,2:-0.28966236094;LMO2:-0.293491225813;DMAP1_NCOR{1,2}_SMARC:-0.296511459401;XBP1:-0.306593713194;NKX2-2,8:-0.315569905143;POU3F1..4:-0.32002618054;GFI1:-0.32343351782;IKZF1:-0.339337619306;SOX2:-0.366435949595;HAND1,2:-0.383627501359;SPI1:-0.389218558972;RUNX1..3:-0.417241346798;ATF5_CREB3:-0.418126755128;NFATC1..3:-0.420550357761;GZF1:-0.436308391121;RREB1:-0.450365596384;FOXL1:-0.478078662164;RFX2..5_RFXANK_RFXAP:-0.47965212974;MAZ:-0.509744999444;EBF1:-0.521937188515;STAT2,4,6:-0.526045694555;JUN:-0.534903969287;SRF:-0.542026127418;CRX:-0.548871782053;TOPORS:-0.555017261684;SMAD1..7,9:-0.556027381403;FOXM1:-0.576970143904;ESRRA:-0.588305205972;CDX1,2,4:-0.594348920676;ZNF238:-0.60470432322;ZNF384:-0.643842713625;IRF1,2:-0.67779945029;HMGA1,2:-0.698387822357;PAX6:-0.704914359341;MYBL2:-0.718589193277;GFI1B:-0.722187983045;ZIC1..3:-0.724072820958;CREB1:-0.755586565961;SREBF1,2:-0.759486646018;FOXO1,3,4:-0.771266142245;UFEwm:-0.778742290307;HBP1_HMGB_SSRP1_UBTF:-0.791633096893;MZF1:-0.798953256309;ARID5B:-0.80644830762;NKX3-2:-0.822001240174;MTE{core}:-0.824878334534;EVI1:-0.840603426298;DBP:-0.89039736508;ALX4:-0.897272705494;HSF1,2:-0.907623779788;MYFfamily:-0.926375429678;NKX6-1,2:-0.955230450185;TBP:-0.956668940032;KLF4:-0.97593943271;NFE2L1:-0.979512269427;NANOG{mouse}:-1.00538708946;MAFB:-1.02483343386;GATA4:-1.04236944154;STAT1,3:-1.11104525963;FOXN1:-1.13367506383;SPZ1:-1.15550453389;TGIF1:-1.18489071858;FOXP3:-1.32255470604;TLX2:-1.34586539555;EP300:-1.365738399;HIF1A:-1.40803711443;HMX1:-1.43110334727;ATF6:-1.59154530508;GCM1,2:-1.67307935001
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10603-108E9;search_select_hide=table117:FF:10603-108E9
}}
}}

Latest revision as of 14:30, 3 June 2020

Name:embryonic pancreas cell line:2C6
Species:Human (Homo sapiens)
Library ID:CNhs11814
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuepancreas
dev stageNA
sexunknown
age19 week embryo
cell typeunclassifiable
cell line2C6
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004815
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11814 CAGE DRX007875 DRR008747
Accession ID Hg19

Library idBAMCTSS
CNhs11814 DRZ000172 DRZ001557
Accession ID Hg38

Library idBAMCTSS
CNhs11814 DRZ011522 DRZ012907
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.115
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.209
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.029
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.208
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.169
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.108
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0762
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0148
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.192
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11814

Jaspar motifP-value
MA0002.20.292
MA0003.10.52
MA0004.10.0105
MA0006.10.976
MA0007.10.433
MA0009.10.326
MA0014.10.397
MA0017.10.0327
MA0018.20.317
MA0019.10.6
MA0024.10.0523
MA0025.10.608
MA0027.10.508
MA0028.10.19
MA0029.10.106
MA0030.10.0171
MA0031.10.525
MA0035.20.00759
MA0038.10.682
MA0039.20.0231
MA0040.10.233
MA0041.10.2
MA0042.10.472
MA0043.10.743
MA0046.10.0627
MA0047.20.0681
MA0048.10.0346
MA0050.10.0701
MA0051.10.839
MA0052.10.128
MA0055.11.89298e-4
MA0057.10.673
MA0058.10.0453
MA0059.10.135
MA0060.10.805
MA0061.10.131
MA0062.20.753
MA0065.20.00103
MA0066.10.784
MA0067.10.693
MA0068.10.362
MA0069.10.63
MA0070.10.769
MA0071.10.238
MA0072.10.124
MA0073.10.753
MA0074.10.877
MA0076.10.744
MA0077.10.716
MA0078.10.551
MA0079.20.539
MA0080.20.302
MA0081.10.671
MA0083.10.254
MA0084.10.395
MA0087.10.668
MA0088.10.173
MA0090.10.393
MA0091.10.155
MA0092.10.197
MA0093.10.0326
MA0099.24.32089e-14
MA0100.10.93
MA0101.10.0861
MA0102.20.309
MA0103.10.134
MA0104.20.00747
MA0105.10.699
MA0106.10.351
MA0107.10.0825
MA0108.20.0149
MA0111.10.304
MA0112.20.679
MA0113.10.375
MA0114.10.0045
MA0115.10.11
MA0116.10.255
MA0117.10.128
MA0119.10.0167
MA0122.10.0648
MA0124.10.401
MA0125.10.728
MA0131.10.0144
MA0135.10.425
MA0136.10.922
MA0137.20.545
MA0138.20.762
MA0139.10.675
MA0140.10.00261
MA0141.10.176
MA0142.10.343
MA0143.10.997
MA0144.10.751
MA0145.10.36
MA0146.10.668
MA0147.18.10496e-4
MA0148.10.00399
MA0149.10.0457
MA0150.10.0576
MA0152.10.841
MA0153.10.657
MA0154.10.94
MA0155.10.761
MA0156.10.223
MA0157.10.614
MA0159.10.103
MA0160.10.0361
MA0162.10.216
MA0163.10.139
MA0164.10.802
MA0258.10.697
MA0259.10.467



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11814

Novel motifP-value
10.774
100.734
1000.922
1010.83
1020.22
1030.0712
1040.604
1050.0817
1060.0446
1070.476
1080.765
1090.011
110.999
1100.184
1110.0253
1120.342
1130.244
1140.367
1150.319
1160.474
1170.655
1180.882
1190.403
120.518
1200.453
1210.706
1220.0216
1230.304
1240.53
1250.775
1260.982
1270.975
1280.699
1290.239
130.0396
1300.108
1310.0669
1320.627
1330.0224
1340.227
1350.0508
1360.924
1370.586
1380.705
1390.0549
140.21
1400.877
1410.7
1420.915
1430.514
1440.492
1450.411
1460.0786
1470.2
1480.256
1490.66
150.0135
1500.855
1510.585
1520.775
1530.619
1540.688
1550.669
1560.45
1570.406
1580.739
1590.472
160.964
1600.488
1610.215
1620.955
1630.674
1640.52
1650.953
1660.0884
1670.41
1680.819
1690.985
170.177
180.486
190.117
20.871
200.114
210.654
220.319
230.655
240.581
250.477
260.627
270.498
280.245
290.801
30.684
300.823
310.6
320.00421
330.583
340.155
350.635
360.0707
370.204
380.0677
390.732
40.298
400.0393
410.32
420.103
430.633
440.0855
450.0841
460.956
470.866
480.991
490.148
50.471
500.317
510.275
520.369
530.729
540.159
550.254
560.261
570.0385
580.897
590.435
60.393
600.606
610.183
620.588
630.503
640.638
650.396
660.00831
670.693
680.76
690.772
70.212
700.136
710.36
720.455
730.639
740.711
750.68
760.356
770.677
780.804
790.049
80.631
800.241
810.0642
820.185
830.812
840.189
850.237
860.198
870.534
880.631
890.669
90.64
900.387
910.724
920.343
930.693
940.737
950.174
960.953
970.327
980.026
990.588



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11814


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001264 (pancreas)
0002100 (trunk)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100669 (embryonic cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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