Personal tools

FFCP PHASE1:Mm9::chr3:68808374..68808389,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:68808374..68808389,-
|DHSsupport=NA
|short_description=p3@Ift80
|DPIdataset=NA
|description=CAGE_peak_3_at_Ift80_5end
|association_with_transcript=9bp_to_ENSMUST00000154741_5end
|EntrezGene=68259
|EntrezGene=68259
|HGNC=
|HGNC=
|MCL_coexpression_id=29
|TSSclassifier=NA
|UniProt=D3YWI8
|UniProt=D3YWI8
|association_with_transcript=9bp_to_ENSMUST00000154741_5end
|cluster_id=chr3:68808374..68808389,-
|description=CAGE_peak_3_at_Ift80_5end
|id=chr3:68808374..68808389,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000084,6.46e-07,11;CL:0000827,6.46e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!9.22e-11!41;UBERON:0004177!4.49e-10!29;UBERON:0001004!6.46e-10!42;UBERON:0002370!5.91e-09!23;UBERON:0000974!5.91e-09!23;UBERON:0004807!5.91e-09!23;UBERON:0005058!5.91e-09!23;UBERON:0003351!5.91e-09!23;UBERON:0009113!5.91e-09!23;UBERON:0003295!5.91e-09!23;UBERON:0009722!5.91e-09!23;UBERON:0005562!5.91e-09!23;UBERON:0007690!5.91e-09!23;UBERON:0006562!1.77e-08!24;UBERON:0001557!1.77e-08!24;UBERON:0001042!1.77e-08!24;UBERON:0008814!1.77e-08!24;UBERON:0009145!1.77e-08!24;UBERON:0003408!6.36e-08!24;UBERON:0000072!7.35e-08!27;UBERON:0002390!5.45e-07!45;UBERON:0003061!5.45e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.30e-15,29;UBERON:0005057,9.30e-15,29;UBERON:0002370,1.35e-13,23;UBERON:0000974,1.35e-13,23;UBERON:0004807,1.35e-13,23;UBERON:0005058,1.35e-13,23;UBERON:0003351,1.35e-13,23;UBERON:0009113,1.35e-13,23;UBERON:0003295,1.35e-13,23;UBERON:0009722,1.35e-13,23;UBERON:0005562,1.35e-13,23;UBERON:0007690,1.35e-13,23;UBERON:0000153,1.71e-13,43;UBERON:0006562,1.01e-12,24;UBERON:0003408,1.01e-12,24;UBERON:0001557,1.01e-12,24;UBERON:0001042,1.01e-12,24;UBERON:0008814,1.01e-12,24;UBERON:0009145,1.01e-12,24;UBERON:0002390,5.69e-12,45;UBERON:0003061,5.69e-12,45;UBERON:0000077,8.39e-12,35;UBERON:0002193,8.80e-12,48;UBERON:0002405,8.80e-12,48;UBERON:0007811,9.40e-12,36;UBERON:0000065,2.44e-11,41;UBERON:0001004,7.61e-11,42;UBERON:0000072,1.64e-10,27;UBERON:0002530,7.62e-07,65;UBERON:0002368,7.79e-07,60;UBERON:0003081,8.37e-07,87
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.233612640595526,64.8199083676713,1.267098499365,2.34064526321993,0.68487187290202,0.638177271962691,15.2368649638773,9.61624426608971,0.333109761815663,2.42970320867791,0.699561878128147,2.05050407482854,1.7824876368746,1.69755860719212,2.38121212422995,2.38298282882125,1.56719873483361,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,0,0.166234645358492,0.204169356262369,1.25559489221072,0.7813353445238,3.14114246384279,2.94115744015507,2.73218193983378,0.971020706062307,1.1330713617802,0.811015449756117,2.75320128242522,0,0.65407546914134,1.31811709640683,0.388859798148567,0.55994568650145,0,0.671130424230945,11.6057942721815,19.8295341494054,1.02903774414379,0.573066879877513,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0.420649922702764,0.285650984403804,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0.255374676170375,0.768032666281217,0.131886287730194,0.182975287204819,0.52091337055676,0,0.56276261003168,0.61119299110724,0.883885756421003,1.28134512719193,0.186399445825301,0.151452386666368,0.377857800533928,1.44932244350839,0,0,0,0,1.34408066129201,0.702222100658759,2.04516387093669,0.779358013808606,1.41335829804136,0.281686839553361,5.13305909657271,0,0,0.649473123033642,0.760079596425296,0.505524445014783,0.22836775943812,6.99132285847364,1.48442139064825,0.693941307064543,0.304465478312141,0.461230994512117,1.05505848386836,0.23517741427141,0.753999547978053,0.247194967734374,0.86759614151947,0.884610551949874,0.647067399789637,0.441683036920787,1.45462575940567,0,0.585561594023094,0.628340120440365,0.510914110417183,0.11981512450592,0.599902730993408,1.14363204365758,1.04853447583376,0.915001205637253,0.376963056338593,0.695297280769106,0.255715457330331,0.62336413367868,0.486723789203273,0.712875546952214,1.24406970610093,0.505445516867349,0.210441855886474,1.56144531555244,2.06911893990126,0.900310649026746,1.20563854268572,1.29269348387523,2.0498195245576,0.843315521037559,1.29351685369508,1.07783996466421,1.32374256117473,1.23165786914764,1.09597866213787,1.11218899690239,1.74126083261083,0.61734640922383,0.398068533636986,0,0.772043721344145,1.13665399758237,0.828503090142008,0.234526059981096,0.900310307305074,0.710234206755631,0.196764231747404,0.617068451549513,0.465067889500816,0,0.934122738937356,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,0.630869845692382,0.205809224758569,0,0.264450566663544,1.70630600428187,1.16118335930219,0.257734922644187,0.201683524623343,0.444756087689741,1.14135375667535,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0.758671603812327,1.37098215131675,2.25415471346161,1.22190796707189,0.969762435838129,1.33258057791605,0.758838445491087,1.03327103585722,0.941992367048249,0.370191491765402,0.889357881261447,0.500535317148282,0.982794975566015,0.449724224769707,0.405720242777006,0,0.763877555344259,0.575392274901621,0.648540907100142,0.549122826376163,0,1.11642284300551,0,0,0.538192240565737,0,0.923765950833023,0.568474235311454,0.651859905768103,1.18821560042632,0.938760993154008,1.84256883185997,2.85652369063216,0.975668239288994,1.57635144106191,1.7717175171902,0.956728611944923,1.47476983244164,1.03610989119537,2.16973587872267,1.50791283939272,0,1.47529281905711,1.65562047782839,0.321101179975584,0.117211686592203,0.819674726883377,0,1.26203287766503,1.17131623288992,1.50796378412959,0.477937595905104,0.445597348164788,1.13230612315533,1.21443210502468,0.292255857911312,0.790575555893047,0.642642632843614,0.425820255624806,0.712262414669021,0.81443479676788,1.48473110675282,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,1.05418608574999,0,4.76615448055303,2.16073312837572,0.388076051348264,1.92903331528433,1.77340233642274,1.78368817602071,1.48094118541909,0.913394847343798,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.361877549568935,0.477489376012546,0.820704498725306,0.291480836629851,0.370850604021019,2.22132145037209,0.206386867963223,0.925972636848558,2.0720530270516,1.77702496037333,2.28778173206523,0.509935289981566,0.839708713941948,0.967399816630967,0,0.949007980743406,1.01659733563424,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.388844919875379,0,12.9649375897364,0.598066184175915,0.66183396182839,1.16670713006429,0.774958940866387,0.844780627453891,1.40828686374905,0.5208175393758,1.36317147753424,7.9722759872582,7.77681016896237,6.32022241256356,1.41907650703115,2.67048488628551,3.50786222040047,6.26593434836185,4.76835251475036,5.7693815769585,5.90758108698309,7.47151729616292,5.71551049912499,5.54544018252623,6.23730436734416,6.06134602334076,10.0514135876149,0.453460767230423,0,0.0897138566094757,0.503653849092235,0.19318959403219,0.93841237725591,0.73260649706906,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.726511433089237,0.399024873401031,0.853668028770671,0.243106717068294,0.628839487883947,0.367687016900028,0.666740183404846,0.618105171716683,0,1.01078884705519,0.760437899670719,0.943131706930381,0.561849044819294,0.448176066834085,0.34461281373368,0,0.347652977834566,0.578727661391115,1.23625770240992,0.735994600671987,0,1.59728225543404,0.953744759789284,0.581385666529314,0.376437521661322,0.169229215783353,0.73171189149109,0.526139422875686,0.407412341537585,0,0.355905054372522,0.788035859004508,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,1.16965804222704,0.859484216193193,0.956441660344217,0.220591419119515,0.695603506861264
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.233612640595526,64.8199083676713,1.267098499365,2.34064526321993,0.68487187290202,0.638177271962691,15.2368649638773,9.61624426608971,0.333109761815663,2.42970320867791,0.699561878128147,2.05050407482854,1.7824876368746,1.69755860719212,2.38121212422995,2.38298282882125,1.56719873483361,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,0,0.166234645358492,0.204169356262369,1.25559489221072,0.7813353445238,3.14114246384279,2.94115744015507,2.73218193983378,0.971020706062307,1.1330713617802,0.811015449756117,2.75320128242522,0,0.65407546914134,1.31811709640683,0.388859798148567,0.55994568650145,0,0.671130424230945,11.6057942721815,19.8295341494054,1.02903774414379,0.573066879877513,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0.420649922702764,0.285650984403804,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0.255374676170375,0.768032666281217,0.131886287730194,0.182975287204819,0.52091337055676,0,0.56276261003168,0.61119299110724,0.883885756421003,1.28134512719193,0.186399445825301,0.151452386666368,0.377857800533928,1.44932244350839,0,0,0,0,1.34408066129201,0.702222100658759,2.04516387093669,0.779358013808606,1.41335829804136,0.281686839553361,5.13305909657271,0,0,0.649473123033642,0.760079596425296,0.505524445014783,0.22836775943812,6.99132285847364,1.48442139064825,0.693941307064543,0.304465478312141,0.461230994512117,1.05505848386836,0.23517741427141,0.753999547978053,0.247194967734374,0.86759614151947,0.884610551949874,0.647067399789637,0.441683036920787,1.45462575940567,0,0.585561594023094,0.628340120440365,0.510914110417183,0.11981512450592,0.599902730993408,1.14363204365758,1.04853447583376,0.915001205637253,0.376963056338593,0.695297280769106,0.255715457330331,0.62336413367868,0.486723789203273,0.712875546952214,1.24406970610093,0.505445516867349,0.210441855886474,1.56144531555244,2.06911893990126,0.900310649026746,1.20563854268572,1.29269348387523,2.0498195245576,0.843315521037559,1.29351685369508,1.07783996466421,1.32374256117473,1.23165786914764,1.09597866213787,1.11218899690239,1.74126083261083,0.61734640922383,0.398068533636986,0,0.772043721344145,1.13665399758237,0.828503090142008,0.234526059981096,0.900310307305074,0.710234206755631,0.196764231747404,0.617068451549513,0.465067889500816,0,0.934122738937356,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,0.630869845692382,0.205809224758569,0,0.264450566663544,1.70630600428187,1.16118335930219,0.257734922644187,0.201683524623343,0.444756087689741,1.14135375667535,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0.758671603812327,1.37098215131675,2.25415471346161,1.22190796707189,0.969762435838129,1.33258057791605,0.758838445491087,1.03327103585722,0.941992367048249,0.370191491765402,0.889357881261447,0.500535317148282,0.982794975566015,0.449724224769707,0.405720242777006,0,0.763877555344259,0.575392274901621,0.648540907100142,0.549122826376163,0,1.11642284300551,0,0,0.538192240565737,0,0.923765950833023,0.568474235311454,0.651859905768103,1.18821560042632,0.938760993154008,1.84256883185997,2.85652369063216,0.975668239288994,1.57635144106191,1.7717175171902,0.956728611944923,1.47476983244164,1.03610989119537,2.16973587872267,1.50791283939272,0,1.47529281905711,1.65562047782839,0.321101179975584,0.117211686592203,0.819674726883377,0,1.26203287766503,1.17131623288992,1.50796378412959,0.477937595905104,0.445597348164788,1.13230612315533,1.21443210502468,0.292255857911312,0.790575555893047,0.642642632843614,0.425820255624806,0.712262414669021,0.81443479676788,1.48473110675282,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,1.05418608574999,0,4.76615448055303,2.16073312837572,0.388076051348264,1.92903331528433,1.77340233642274,1.78368817602071,1.48094118541909,0.913394847343798,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.361877549568935,0.477489376012546,0.820704498725306,0.291480836629851,0.370850604021019,2.22132145037209,0.206386867963223,0.925972636848558,2.0720530270516,1.77702496037333,2.28778173206523,0.509935289981566,0.839708713941948,0.967399816630967,0,0.949007980743406,1.01659733563424,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.388844919875379,0,12.9649375897364,0.598066184175915,0.66183396182839,1.16670713006429,0.774958940866387,0.844780627453891,1.40828686374905,0.5208175393758,1.36317147753424,7.9722759872582,7.77681016896237,6.32022241256356,1.41907650703115,2.67048488628551,3.50786222040047,6.26593434836185,4.76835251475036,5.7693815769585,5.90758108698309,7.47151729616292,5.71551049912499,5.54544018252623,6.23730436734416,6.06134602334076,10.0514135876149,0.453460767230423,0,0.0897138566094757,0.503653849092235,0.19318959403219,0.93841237725591,0.73260649706906,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.726511433089237,0.399024873401031,0.853668028770671,0.243106717068294,0.628839487883947,0.367687016900028,0.666740183404846,0.618105171716683,0,1.01078884705519,0.760437899670719,0.943131706930381,0.561849044819294,0.448176066834085,0.34461281373368,0,0.347652977834566,0.578727661391115,1.23625770240992,0.735994600671987,0,1.59728225543404,0.953744759789284,0.581385666529314,0.376437521661322,0.169229215783353,0.73171189149109,0.526139422875686,0.407412341537585,0,0.355905054372522,0.788035859004508,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,1.16965804222704,0.859484216193193,0.956441660344217,0.220591419119515,0.695603506861264
|short_description=p3@Ift80
}}
}}

Latest revision as of 16:22, 25 September 2015

Short description:p3@Ift80
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ift80_5end
Coexpression cluster:MCL_coexpression_mm9:29
Association with transcript: 9bp_to_ENSMUST00000154741_5end
EntrezGene:Ift80
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ift80

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.83
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F85.77
thymus, neonate N03.CNhs11137.2104-43C75.91
thymus, neonate N06.CNhs11197.681-26C47.47
thymus, neonate N07.CNhs11211.713-19D35.72
thymus, neonate N10.CNhs11194.748-24E45.55
thymus, neonate N20.CNhs11186.820-7A26.24
thymus, neonate N25.CNhs11125.1362-25G76.06
thymus, neonate N30.CNhs11132.1393-42G210.05
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell6.46e-0711
pro-T cell6.46e-0711

Uber anatomy
Ontology termp-valuen
hemopoietic organ9.30e-1529
immune organ9.30e-1529
thymus1.35e-1323
neck1.35e-1323
respiratory system epithelium1.35e-1323
hemolymphoid system gland1.35e-1323
pharyngeal epithelium1.35e-1323
thymic region1.35e-1323
pharyngeal gland1.35e-1323
entire pharyngeal arch endoderm1.35e-1323
thymus primordium1.35e-1323
early pharyngeal endoderm1.35e-1323
anterior region of body1.71e-1343
pharynx1.01e-1224
gland of gut1.01e-1224
upper respiratory tract1.01e-1224
chordate pharynx1.01e-1224
pharyngeal arch system1.01e-1224
pharyngeal region of foregut1.01e-1224
hematopoietic system5.69e-1245
blood island5.69e-1245
mixed endoderm/mesoderm-derived structure8.39e-1235
hemolymphoid system8.80e-1248
immune system8.80e-1248
craniocervical region9.40e-1236
respiratory tract2.44e-1141
respiratory system7.61e-1142
segment of respiratory tract1.64e-1027
gland7.62e-0765
endocrine gland7.79e-0760
lateral plate mesoderm8.37e-0787
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:68808374..68808389,-&oldid=4201731"