FFCP PHASE1:Mm9::chr5:33678919..33678930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:33678919..33678930,+ | |||
|description=CAGE_peak_at_chr5:33678919..33678930,+ | |||
|id=chr5:33678919..33678930,+ | |||
|ontology_enrichment_celltype=CL:0000355!6.49e-08!9;CL:0000222!5.43e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.03e-24,6;CL:0000187,1.03e-24,6;CL:0000056,1.03e-24,6;CL:0000222,4.01e-21,7;CL:0000355,2.51e-16,9;CL:0002494,6.29e-14,3;CL:0000737,6.29e-14,3;CL:0000746,6.29e-14,3;CL:0000513,6.29e-14,3;CL:0000192,1.87e-12,3;CL:0000359,1.87e-12,3;CL:0002539,1.87e-12,3;CL:0000514,1.87e-12,3;CL:0000128,2.40e-11,6;CL:0000126,2.40e-11,6;CL:0000127,2.40e-11,6;CL:0002605,1.52e-09,2;CL:0002604,1.52e-09,2;CL:0002453,1.55e-08,8;CL:0002321,1.06e-07,70;CL:0000333,7.62e-07,10;CL:0000095,7.62e-07,10;CL:0000243,7.62e-07,10;CL:0000123,7.62e-07,10;CL:0000125,7.62e-07,10;CL:0000030,7.62e-07,10;CL:0000339,7.62e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.49e-08!9;UBERON:0002036!6.49e-08!9;UBERON:0002385!6.49e-08!9;UBERON:0000486!6.49e-08!9;UBERON:0001015!6.49e-08!9;UBERON:0004290!6.49e-08!9;UBERON:0003082!6.49e-08!9;UBERON:0002329!5.67e-07!11;UBERON:0003077!5.67e-07!11;UBERON:0003059!5.67e-07!11;UBERON:0007282!5.67e-07!11;UBERON:0009618!5.67e-07!11;UBERON:0007285!5.67e-07!11;UBERON:0000383!9.82e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.51e-16,9;UBERON:0002036,2.51e-16,9;UBERON:0002385,2.51e-16,9;UBERON:0000486,2.51e-16,9;UBERON:0007503,2.51e-16,9;UBERON:0001015,2.51e-16,9;UBERON:0002329,2.51e-16,9;UBERON:0003082,2.51e-16,9;UBERON:0003059,2.51e-16,9;UBERON:0007282,2.51e-16,9;UBERON:0004290,2.51e-16,9;UBERON:0009618,2.51e-16,9;UBERON:0000383,1.21e-14,10;UBERON:0007524,2.87e-13,11;UBERON:0003077,2.87e-13,11;UBERON:0007285,2.87e-13,11;UBERON:0001135,1.87e-12,3;UBERON:0004237,1.87e-12,3;UBERON:0004695,1.87e-12,3;UBERON:0002111,1.87e-12,3;UBERON:0004178,1.87e-12,3;UBERON:0000947,1.80e-09,4;UBERON:0001637,1.80e-09,4;UBERON:0004573,1.80e-09,4;UBERON:0003509,1.80e-09,4;UBERON:0004571,1.80e-09,4;UBERON:0010191,1.80e-09,4;UBERON:0004572,1.80e-09,4;UBERON:0000055,1.14e-07,5;UBERON:0007500,1.14e-07,5;UBERON:0001981,1.14e-07,5;UBERON:0002049,1.14e-07,5;UBERON:0007798,1.14e-07,5;UBERON:0004537,1.14e-07,5;UBERON:0006965,1.14e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,1.38486499773135,1.82478476195126,1.10128051297009,0,1.52617609466313,1.5378032791413,3.88859798148567,0.699932108126813,1.43752564364972,0,0,0,10.2903774414379,2.57880095944881,5.67239301505187,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,0,0,0.519572009205738,0,0.281686839553361,2.56652954828636,0,0,0.432982082022428,1.26679932737549,1.01104889002957,0,0,0,0,0,0,0.150722640552623,0.470354828542819,0,2.96633961281249,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.373220911830279,0,0,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0.241177159752417,0.50925170356284,0.575392274901621,1.13494658742525,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0.478364305972461,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0.809621403349789,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.469343416127421,2.1183207086382,0,0.32977250588296,0,0.422190474497091,0.835606408021955,0.328281799490123,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,1.24267862617385,3.38215763210514,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0.966336483304024,1.44015003128933,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0,0,0.680191150845634,0.443971906748129,0.807424709485281,1.34307693091263,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.256100609619477,0,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0,0,0.309873682371932,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,1.38486499773135,1.82478476195126,1.10128051297009,0,1.52617609466313,1.5378032791413,3.88859798148567,0.699932108126813,1.43752564364972,0,0,0,10.2903774414379,2.57880095944881,5.67239301505187,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,0,0,0.519572009205738,0,0.281686839553361,2.56652954828636,0,0,0.432982082022428,1.26679932737549,1.01104889002957,0,0,0,0,0,0,0.150722640552623,0.470354828542819,0,2.96633961281249,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.373220911830279,0,0,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0.241177159752417,0.50925170356284,0.575392274901621,1.13494658742525,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0.478364305972461,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0.809621403349789,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.469343416127421,2.1183207086382,0,0.32977250588296,0,0.422190474497091,0.835606408021955,0.328281799490123,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,1.24267862617385,3.38215763210514,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0.966336483304024,1.44015003128933,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0,0,0.680191150845634,0.443971906748129,0.807424709485281,1.34307693091263,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.256100609619477,0,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0,0,0.309873682371932,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr5:33678919..33678930,+ | |||
}} | }} |
Latest revision as of 07:56, 4 August 2015
Short description: | p@chr5:33678919..33678930, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:33678919..33678930, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.03e-24 | 6 |
muscle cell | 1.03e-24 | 6 |
myoblast | 1.03e-24 | 6 |
mesodermal cell | 4.01e-21 | 7 |
multi-potent skeletal muscle stem cell | 2.51e-16 | 9 |
cardiocyte | 6.29e-14 | 3 |
striated muscle cell | 6.29e-14 | 3 |
cardiac muscle cell | 6.29e-14 | 3 |
cardiac muscle myoblast | 6.29e-14 | 3 |
smooth muscle cell | 1.87e-12 | 3 |
vascular associated smooth muscle cell | 1.87e-12 | 3 |
aortic smooth muscle cell | 1.87e-12 | 3 |
smooth muscle myoblast | 1.87e-12 | 3 |
oligodendrocyte | 2.40e-11 | 6 |
macroglial cell | 2.40e-11 | 6 |
astrocyte | 2.40e-11 | 6 |
astrocyte of the cerebral cortex | 1.52e-09 | 2 |
astrocyte of the hippocampus | 1.52e-09 | 2 |
oligodendrocyte precursor cell | 1.55e-08 | 8 |
embryonic cell | 1.06e-07 | 70 |
migratory neural crest cell | 7.62e-07 | 10 |
neuron associated cell | 7.62e-07 | 10 |
glial cell (sensu Vertebrata) | 7.62e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.62e-07 | 10 |
glial cell | 7.62e-07 | 10 |
glioblast | 7.62e-07 | 10 |
glioblast (sensu Vertebrata) | 7.62e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.51e-16 | 9 |
striated muscle tissue | 2.51e-16 | 9 |
muscle tissue | 2.51e-16 | 9 |
multilaminar epithelium | 2.51e-16 | 9 |
epithelial vesicle | 2.51e-16 | 9 |
musculature | 2.51e-16 | 9 |
somite | 2.51e-16 | 9 |
myotome | 2.51e-16 | 9 |
presomitic mesoderm | 2.51e-16 | 9 |
presumptive segmental plate | 2.51e-16 | 9 |
dermomyotome | 2.51e-16 | 9 |
trunk paraxial mesoderm | 2.51e-16 | 9 |
musculature of body | 1.21e-14 | 10 |
dense mesenchyme tissue | 2.87e-13 | 11 |
paraxial mesoderm | 2.87e-13 | 11 |
presumptive paraxial mesoderm | 2.87e-13 | 11 |
smooth muscle tissue | 1.87e-12 | 3 |
blood vessel smooth muscle | 1.87e-12 | 3 |
arterial system smooth muscle | 1.87e-12 | 3 |
artery smooth muscle tissue | 1.87e-12 | 3 |
aorta smooth muscle tissue | 1.87e-12 | 3 |
aorta | 1.80e-09 | 4 |
artery | 1.80e-09 | 4 |
systemic artery | 1.80e-09 | 4 |
arterial blood vessel | 1.80e-09 | 4 |
systemic arterial system | 1.80e-09 | 4 |
aortic system | 1.80e-09 | 4 |
arterial system | 1.80e-09 | 4 |
vessel | 1.14e-07 | 5 |
epithelial tube open at both ends | 1.14e-07 | 5 |
blood vessel | 1.14e-07 | 5 |
vasculature | 1.14e-07 | 5 |
vascular system | 1.14e-07 | 5 |
blood vasculature | 1.14e-07 | 5 |
vascular cord | 1.14e-07 | 5 |