FFCP PHASE1:Mm9::chr7:20282030..20282052,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:20282030..20282052,- to FFCP PHASE1:Mm9::chr7:20282030..20282052,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:20282030..20282052,- | |||
|description=CAGE_peak_at_chr7:20282030..20282052,- | |||
|id=chr7:20282030..20282052,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.59e-09,5;CL:0002319,9.32e-09,43;CL:0000221,1.88e-08,44;CL:0000133,1.88e-08,44;CL:0002194,1.21e-07,4;CL:0000766,1.21e-07,4;CL:0000234,1.21e-07,4;CL:0000576,1.21e-07,4;CL:0000235,1.21e-07,4;CL:0000864,1.21e-07,4;CL:0002009,1.21e-07,4;CL:0000040,1.21e-07,4;CL:0000559,1.21e-07,4;CL:0002321,1.63e-07,70;CL:0002453,3.14e-07,8;CL:0002092,6.50e-07,3;CL:0002540,6.50e-07,3;CL:0000723,7.61e-07,91;CL:0000048,7.61e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.12e-13!22;UBERON:0007499!3.12e-13!22;UBERON:0006925!3.12e-13!22;UBERON:0009497!3.12e-13!22;UBERON:0000015!3.12e-13!22;UBERON:0002423!3.12e-13!22;UBERON:0006235!3.12e-13!22;UBERON:0008835!3.12e-13!22;UBERON:0003894!3.12e-13!22;UBERON:0004161!3.12e-13!22;UBERON:0008836!3.12e-13!22;UBERON:0002365!1.74e-12!25;UBERON:0002330!1.74e-12!25;UBERON:0009854!4.31e-12!23;UBERON:0009856!4.31e-12!23;UBERON:0004121!3.20e-10!102;UBERON:0000924!3.20e-10!102;UBERON:0006601!3.20e-10!102;UBERON:0001017!1.57e-09!73;UBERON:0005743!1.57e-09!73;UBERON:0004111!2.21e-09!122;UBERON:0000073!3.13e-09!75;UBERON:0001016!3.13e-09!75;UBERON:0000025!5.07e-09!114;UBERON:0005256!4.12e-08!47;UBERON:0005172!1.73e-07!49;UBERON:0005173!1.73e-07!49;UBERON:0002417!1.73e-07!49;UBERON:0000916!1.73e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.33e-28,22;UBERON:0007499,9.33e-28,22;UBERON:0006925,9.33e-28,22;UBERON:0009497,9.33e-28,22;UBERON:0000015,9.33e-28,22;UBERON:0002423,9.33e-28,22;UBERON:0006235,9.33e-28,22;UBERON:0008835,9.33e-28,22;UBERON:0003894,9.33e-28,22;UBERON:0004161,9.33e-28,22;UBERON:0008836,9.33e-28,22;UBERON:0009854,2.73e-26,23;UBERON:0009856,2.73e-26,23;UBERON:0002365,1.03e-23,25;UBERON:0002330,1.03e-23,25;UBERON:0005256,9.12e-12,45;UBERON:0005172,2.40e-10,49;UBERON:0005173,2.40e-10,49;UBERON:0002417,2.40e-10,49;UBERON:0000916,2.40e-10,49;UBERON:0003914,5.60e-10,47;UBERON:0000025,6.40e-10,114;UBERON:0004111,2.35e-09,122;UBERON:0001017,7.38e-08,73;UBERON:0003929,9.03e-08,55;UBERON:0001016,1.74e-07,75;UBERON:0003104,3.00e-07,61;UBERON:0009142,3.00e-07,61;UBERON:0011216,3.13e-07,194 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,2.09868563438444,0,0,0,0.425216450755349,0,0,0.159992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,3.9119567217402,1.74420125104357,0.878744730937887,1.94429899074283,0.979904951377538,2.87505128729943,0.503347818173209,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0.677689064138264,0,49.0445345918362,75.1538435550901,61.8117700003107,17.0772062995491,21.5162250980071,0.207379224616955,0,0.210324961351382,3.42781181284564,2.87129103237098,0,0.0958454710182364,0,3.30347642998166,1.65993539510744,2.15049146558741,0,0.0914876436024097,0,2.51264699101243,5.06486349028512,2.75036845998258,1.17851434189467,2.13557521198654,0.372798891650601,0.075726193333184,0.0755715601067855,1.44932244350839,21.5105969245347,21.0791113449403,27.5248627735287,29.2399387851451,15.2329141613094,2.94933282276679,0,0,0,0.281686839553361,0,0,0,0,0,0,6.39429726426736,0.776813650941515,0.890652834388949,0,0.913396434936424,0.691846491768175,0.452167921657868,0.587943535678524,0.125666591329675,1.23597483867187,0.433798070759735,0,0,0,0.484875253135222,0,0,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0.599162557619291,0.915001205637253,0.251308704225729,0.869121600961382,0,1.0389402227978,0.162241263067758,0.101839363850316,0.248813941220186,0,0.420883711772948,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.630869845692382,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0.738050739898011,0,0.370191491765402,12.1545577105731,1.16791574001266,0.196558995113203,0.224862112384854,1.42002084971952,1.20588579876208,3.31013607315846,5.75392274901621,5.0261920300261,7.4131581560782,56.0696005456683,10.4199465347181,9.04909252032226,12.1237861414614,8.43167843552987,11.0962009913574,0,0,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,16.5870412333199,1.63171705145613,0.491764273019036,0.551873492609465,1.60550589987792,0.234423373184406,0,0,0.94652465824877,0,0.430846795465598,0.716906393857656,1.55959071857676,0.566153061577665,0.404810701674894,1.16902343164525,1.97643888973262,1.60660658210904,0,0,0.488660878060728,0.164970122972535,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0,0.913394847343798,0.23467170806371,0,0.220528398054962,0.8244312647074,0.322928853391811,0.180938774784468,0.954978752025092,0.328281799490123,0,0.927126510052548,0.683483523191411,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.292373642219257,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0,1.00314420807073,0,0.920650473014354,0.572895513439397,1.20297227640581,1.37016503954128,3.0215755895588,1.35004500046361,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0,0.280924522409647,0.320125762024346,0.34461281373368,0.476293691283074,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.887379030796687,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0,0.679020569229309,0.561142271657738,0.474540072496697,0.0985044823755635,0,0,0,0,0.935726433781634,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,2.09868563438444,0,0,0,0.425216450755349,0,0,0.159992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,3.9119567217402,1.74420125104357,0.878744730937887,1.94429899074283,0.979904951377538,2.87505128729943,0.503347818173209,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0.677689064138264,0,49.0445345918362,75.1538435550901,61.8117700003107,17.0772062995491,21.5162250980071,0.207379224616955,0,0.210324961351382,3.42781181284564,2.87129103237098,0,0.0958454710182364,0,3.30347642998166,1.65993539510744,2.15049146558741,0,0.0914876436024097,0,2.51264699101243,5.06486349028512,2.75036845998258,1.17851434189467,2.13557521198654,0.372798891650601,0.075726193333184,0.0755715601067855,1.44932244350839,21.5105969245347,21.0791113449403,27.5248627735287,29.2399387851451,15.2329141613094,2.94933282276679,0,0,0,0.281686839553361,0,0,0,0,0,0,6.39429726426736,0.776813650941515,0.890652834388949,0,0.913396434936424,0.691846491768175,0.452167921657868,0.587943535678524,0.125666591329675,1.23597483867187,0.433798070759735,0,0,0,0.484875253135222,0,0,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0.599162557619291,0.915001205637253,0.251308704225729,0.869121600961382,0,1.0389402227978,0.162241263067758,0.101839363850316,0.248813941220186,0,0.420883711772948,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.630869845692382,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0.738050739898011,0,0.370191491765402,12.1545577105731,1.16791574001266,0.196558995113203,0.224862112384854,1.42002084971952,1.20588579876208,3.31013607315846,5.75392274901621,5.0261920300261,7.4131581560782,56.0696005456683,10.4199465347181,9.04909252032226,12.1237861414614,8.43167843552987,11.0962009913574,0,0,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,16.5870412333199,1.63171705145613,0.491764273019036,0.551873492609465,1.60550589987792,0.234423373184406,0,0,0.94652465824877,0,0.430846795465598,0.716906393857656,1.55959071857676,0.566153061577665,0.404810701674894,1.16902343164525,1.97643888973262,1.60660658210904,0,0,0.488660878060728,0.164970122972535,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0,0.913394847343798,0.23467170806371,0,0.220528398054962,0.8244312647074,0.322928853391811,0.180938774784468,0.954978752025092,0.328281799490123,0,0.927126510052548,0.683483523191411,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.292373642219257,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0,1.00314420807073,0,0.920650473014354,0.572895513439397,1.20297227640581,1.37016503954128,3.0215755895588,1.35004500046361,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0,0.280924522409647,0.320125762024346,0.34461281373368,0.476293691283074,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.887379030796687,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0,0.679020569229309,0.561142271657738,0.474540072496697,0.0985044823755635,0,0,0,0,0.935726433781634,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p@chr7:20282030..20282052,- | |||
}} | }} |
Latest revision as of 18:23, 4 August 2015
Short description: | p@chr7:20282030..20282052, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282030..20282052, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.59e-09 | 5 |
neural cell | 9.32e-09 | 43 |
ectodermal cell | 1.88e-08 | 44 |
neurectodermal cell | 1.88e-08 | 44 |
monopoietic cell | 1.21e-07 | 4 |
myeloid leukocyte | 1.21e-07 | 4 |
phagocyte | 1.21e-07 | 4 |
monocyte | 1.21e-07 | 4 |
macrophage | 1.21e-07 | 4 |
tissue-resident macrophage | 1.21e-07 | 4 |
macrophage dendritic cell progenitor | 1.21e-07 | 4 |
monoblast | 1.21e-07 | 4 |
promonocyte | 1.21e-07 | 4 |
embryonic cell | 1.63e-07 | 70 |
oligodendrocyte precursor cell | 3.14e-07 | 8 |
bone marrow cell | 6.50e-07 | 3 |
mesenchymal stem cell of the bone marrow | 6.50e-07 | 3 |
somatic stem cell | 7.61e-07 | 91 |
multi fate stem cell | 7.61e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
liver | 9.33e-28 | 22 |
epithelial sac | 9.33e-28 | 22 |
digestive gland | 9.33e-28 | 22 |
epithelium of foregut-midgut junction | 9.33e-28 | 22 |
anatomical boundary | 9.33e-28 | 22 |
hepatobiliary system | 9.33e-28 | 22 |
foregut-midgut junction | 9.33e-28 | 22 |
hepatic diverticulum | 9.33e-28 | 22 |
liver primordium | 9.33e-28 | 22 |
septum transversum | 9.33e-28 | 22 |
liver bud | 9.33e-28 | 22 |
digestive tract diverticulum | 2.73e-26 | 23 |
sac | 2.73e-26 | 23 |
exocrine gland | 1.03e-23 | 25 |
exocrine system | 1.03e-23 | 25 |
trunk mesenchyme | 9.12e-12 | 45 |
abdomen element | 2.40e-10 | 49 |
abdominal segment element | 2.40e-10 | 49 |
abdominal segment of trunk | 2.40e-10 | 49 |
abdomen | 2.40e-10 | 49 |
epithelial tube | 5.60e-10 | 47 |
tube | 6.40e-10 | 114 |
anatomical conduit | 2.35e-09 | 122 |
central nervous system | 7.38e-08 | 73 |
gut epithelium | 9.03e-08 | 55 |
nervous system | 1.74e-07 | 75 |
mesenchyme | 3.00e-07 | 61 |
entire embryonic mesenchyme | 3.00e-07 | 61 |
organ system subdivision | 3.13e-07 | 194 |