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{{f5samples
{{f5samples
|id=FF:10853-111F7
|DRA_sample_Accession=CAGE@SAMD00005138
|name=mesothelioma cell line:Mero-82
|accession_numbers=CAGE;DRX007942;DRR008814;DRZ000239;DRZ001624;DRZ011589;DRZ012974
|sample_id=10853
|rna_tube_id=111F7
|rna_box=111
|rna_position=F7
|sample_cell_lot=
|sample_cell_catalog=9100105
|sample_company=ECACC
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=mesothelium
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=unknown
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.1
|rna_od260/280=2.06
|sample_cell_type=mesothelial cell
|sample_cell_line=Mero-82
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=mesothelioma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=118.2
|rna_concentration=1.575
|sample_note=
|profile_hcage=CNhs13069,LSID1000,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000076,CL:0000077,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002321
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_disease_facet=DOID:4,DOID:7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000255,CL:0000077
|sample_description=
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0102424
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr19:44331593..44331618,+!p5@ZNF283!1.67!46.26!ZNF283;;chr4:188916918..188916942,+!p1@ZFP42!1.58!36.71!ZFP42;;chr19:22966893..22966924,-!p2@ZNF99!1.49!29.61!ZNF99;;chr14:36989427..36989442,-!p1@NKX2-1!1.37!22.52!NKX2-1;;chr7:63505799..63505904,+!p1@ZNF727!1.36!21.78!ZNF727;;chr19:56879534..56879615,+!p3@ZNF542!1.32!30.84!ZNF542;;chr11:615570..615721,-!p2@IRF7!1.31!37.69!IRF7;;chr19:38210552..38210570,-!p2@ZNF607!1.31!19.33!ZNF607;;chr19:56879817..56879825,+!p4@ZNF542!1.30!19.09!ZNF542;;chr19:12203100..12203132,+!p1@ZNF788!1.29!37.20!ZNF788;;chr15:83953397..83953425,-!p1@BNC1!1.29!21.29!BNC1;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.29!18.36!ZNF676;;chr19:22966925..22966958,-!p1@ZNF99!1.28!17.87!ZNF99;;chr19:44331493..44331552,+!p1@ZNF283!1.27!62.65!ZNF283;;chr19:44331555..44331581,+!p2@ZNF283!1.26!36.47!ZNF283;;chr19:56879653..56879743,+!p1@ZNF542!1.23!114.54!ZNF542;;chr5:170736243..170736279,+!p1@TLX3!1.23!15.91!TLX3;;chr19:36909484..36909525,-!p2@ZFP82!1.22!30.10!ZFP82;;chr6:10412600..10412637,-!p1@TFAP2A!1.22!25.70!TFAP2A;;chr6:10412392..10412409,-!p4@TFAP2A!1.21!17.38!TFAP2A;;chr14:37051798..37051831,-!p1@NKX2-8!1.21!15.17!NKX2-8;;chr19:44331884..44331893,+!p8@ZNF283!1.20!14.93!ZNF283;;chr5:2751762..2751784,-!p1@IRX2!1.20!14.68!IRX2;;chr19:9609272..9609297,-!p1@ZNF560!1.19!14.44!ZNF560;;chr6:126240380..126240430,+!p2@NCOA7!1.18!36.71!NCOA7;;chr19:22193731..22193751,-!p1@ZNF208!1.17!13.71!ZNF208;;chr19:58373157..58373159,+!p4@ZNF587!1.16!24.47!ZNF587;;chr10:8096772..8096787,+!p2@GATA3!1.15!15.42!GATA3;;chr19:36909811..36909826,-!p3@ZFP82!1.15!12.97!ZFP82;;chr10:8096631..8096660,+!p1@GATA3!1.14!15.42!GATA3;;chr19:44331916..44331929,+!p6@ZNF283!1.14!12.73!ZNF283;;chr2:231084639..231084654,-!p2@SP110!1.13!20.80!SP110;;chr17:46682321..46682362,-!p1@HOXB6!1.13!12.48!HOXB6;;chr19:9420326..9420349,-!p@chr19:9420326..9420349,-!1.12!12.24!ZNF699;;chr6:10415276..10415341,-!p2@TFAP2A!1.11!14.68!TFAP2A;;chr19:52932444..52932455,+!p2@ZNF534!1.11!11.75!ZNF534;;chr11:615942..615957,-!p1@IRF7!1.10!110.62!IRF7;;chr19:56879625..56879636,+!p5@ZNF542!1.10!11.50!ZNF542;;chr17:46703687..46703740,-!p1@HOXB9!1.10!11.50!HOXB9;;chr19:22469236..22469266,+!p1@ZNF729!1.06!10.52!ZNF729;;chr19:22817119..22817145,+!p1@ZNF492!1.05!17.38!ZNF492;;chr7:27205136..27205164,-!p1@HOXA9!1.05!10.28!HOXA9;;chr19:36909838..36909849,-!p5@ZFP82!1.03!9.79!ZFP82;;chr19:38183138..38183157,-!p2@ZNF781!1.03!9.79!ZNF781;;chr2:191878812..191878823,-!p2@STAT1!1.02!12.24!STAT1;;chr19:2867325..2867348,+!p1@ZNF556!1.02!9.54!ZNF556;;chr19:21324863..21324874,+!p2@ZNF431!1.00!15.91!ZNF431;;chr17:46687959..46688007,-!p2@HOXB7!1.00!12.48!HOXB7;;chr19:37464453..37464515,+!p4@ZNF568!1.00!9.06!ZNF568;;chr8:11561684..11561751,+!p1@GATA4!1.00!9.06!GATA4;;chr6:34204921..34204939,+!p3@HMGA1!0.99!266.76!HMGA1;;chr19:53758058..53758088,-!p2@ZNF677!0.97!28.14!ZNF677;;chr19:38146320..38146401,-!p1@ZFP30!0.96!46.01!ZFP30;;chr19:53496768..53496799,-!p1@ZNF702P!0.96!12.73!ZNF702P;;chr6:126240356..126240379,+!p7@NCOA7!0.95!9.79!NCOA7;;chr6:85473156..85473210,-!p2@TBX18!0.95!9.79!TBX18;;chr16:86544113..86544145,+!p1@FOXF1!0.93!9.54!FOXF1;;chr19:21579964..21579975,+!p2@ZNF493!0.93!8.57!ZNF493;;chr7:27142290..27142310,-!p1@HOXA2!0.93!7.59!HOXA2;;chr19:52932395..52932413,+!p1@ZNF534!0.93!7.59!ZNF534;;chr17:46688334..46688385,-!p1@HOXB7!0.92!10.77!HOXB7;;chr4:299227..299272,-!p1@ZNF732!0.92!7.34!ZNF732;;chr19:22235279..22235301,+!p1@ZNF257!0.91!13.95!ZNF257;;chr5:134369905..134369972,-!p1@PITX1!0.90!10.77!PITX1;;chr5:170736216..170736238,+!p2@TLX3!0.90!6.85!TLX3;;chr7:27153454..27153469,-!p2@HOXA3!0.90!6.85!HOXA3;;chr11:46299199..46299233,+!p1@CREB3L1!0.89!36.22!CREB3L1;;chr11:65687243..65687276,+!p8@DRAP1!0.89!9.30!DRAP1;;chr11:65687222..65687240,+!p7@DRAP1!0.89!8.81!DRAP1;;chr10:104155659..104155676,+!p4@NFKB2!0.88!8.32!NFKB2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.88!6.61!SEBOX;;chr15:67418047..67418093,+!p4@SMAD3!0.87!8.32!SMAD3;;chr19:22605097..22605121,-!p2@ZNF98!0.87!6.36!ZNF98;;chr21:38071430..38071456,+!p1@SIM2!0.87!6.36!SIM2;;chr3:141121847..141121868,+!p5@ZBTB38!0.85!9.54!ZBTB38;;chr17:46622205..46622218,-!p3@HOXB2!0.85!7.10!HOXB2;;chr17:46132044..46132080,+!p4@NFE2L1!0.85!6.12!NFE2L1;;chr2:176994408..176994492,+!p1@HOXD8!0.85!6.12!HOXD8;;chr7:27196267..27196311,-!p1@HOXA7!0.85!6.12!HOXA7;;chr7:35293685..35293718,-!p1@TBX20!0.85!6.12!TBX20;;chr7:5111723..5111807,+!p2@RBAK!0.85!6.12!RBAK;;chr8:60031619..60031676,-!p1@TOX!0.84!13.46!TOX;;chr7:27205106..27205134,-!p2@HOXA9!0.84!5.87!HOXA9;;chr10:28032421..28032494,-!p2@MKX!0.84!5.87!MKX;;chr12:124873357..124873401,-!p1@NCOR2!0.83!72.20!NCOR2;;chr11:65686952..65686975,+!p5@DRAP1!0.83!33.77!DRAP1;;chr14:24630902..24630948,+!p2@IRF9!0.83!7.10!IRF9;;chr17:41622765..41622821,-!p2@ETV4!0.82!8.81!ETV4;;chr17:41622925..41622976,-!p3@ETV4!0.82!8.57!ETV4;;chr6:10412477..10412490,-!p10@TFAP2A!0.82!5.63!TFAP2A;;chr19:37464063..37464127,+!p2@ZNF568!0.81!7.34!ZNF568;;chr6:126240442..126240459,+!p4@NCOA7!0.81!7.10!NCOA7;;chr2:231084820..231084836,-!p5@SP110!0.81!6.36!SP110;;chr19:58629742..58629787,-!p2@ZSCAN18!0.81!5.38!ZSCAN18;;chr19:20188776..20188826,+!p1@ZNF90!0.80!15.42!ZNF90;;chr8:106330656..106330684,+!p1@ZFPM2!0.80!14.93!ZFPM2;;chr19:21203481..21203504,+!p2@ZNF430!0.80!12.97!ZNF430;;chr2:191878874..191878938,-!p1@STAT1!0.79!306.66!STAT1;;chr19:24097706..24097731,+!p2@ZNF726!0.79!10.28!ZNF726;;chr8:67525443..67525459,-!p2@MYBL1!0.79!8.08!MYBL1;;chr1:158979872..158979898,+!p3@IFI16!0.78!16.64!IFI16;;chr12:80084737..80084763,-!p3@PAWR!0.77!20.07!PAWR;;chr10:28034739..28034756,-!p1@MKX!0.77!4.89!MKX;;chr12:54393880..54393962,+!p1@HOXC9!0.77!4.89!HOXC9;;chr20:42295745..42295765,+!p1@MYBL2!0.76!86.64!MYBL2;;chr5:72744594..72744609,-!p1@FOXD1!0.76!23.74!FOXD1;;chr18:51750414..51750449,-!p5@MBD2!0.76!9.79!MBD2;;chr8:60031682..60031710,-!p2@TOX!0.76!8.08!TOX;;chr7:27788205..27788255,+!p2@TAX1BP1!0.76!7.83!TAX1BP1;;chr12:80083544..80083558,-!p13@PAWR!0.76!6.12!PAWR;;chr17:46622229..46622257,-!p6@HOXB2!0.76!5.63!HOXB2;;chr1:158979792..158979814,+!p2@IFI16!0.75!48.46!IFI16;;chr19:21579908..21579949,+!p1@ZNF493!0.75!30.59!ZNF493;;chr19:58694421..58694485,+!p1@ZNF274!0.75!26.68!ZNF274;;chr5:142780189..142780223,-!p6@NR3C1!0.75!4.65!NR3C1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.75!4.65!HOXC5;;chr14:36989358..36989378,-!p3@NKX2-1!0.75!4.65!NKX2-1;;chr7:139762641..139762768,-!p1@PARP12!0.74!68.04!PARP12;;chr10:8095593..8095625,+!p3@GATA3!0.74!5.38!GATA3;;chr15:67418119..67418162,+!p5@SMAD3!0.74!5.14!SMAD3;;chr12:3068544..3068597,+!p1@TEAD4!0.73!28.88!TEAD4;;chr18:19749541..19749557,+!p1@GATA6!0.73!14.93!GATA6;;chr7:19157043..19157088,-!p2@TWIST1!0.73!11.99!TWIST1;;chr19:22605136..22605154,-!p1@ZNF98!0.73!4.41!ZNF98;;chr19:9473676..9473712,+!p2@ZNF177,p2@ZNF559-ZNF177!0.73!4.41!ZNF177;;chr4:174450089..174450153,-!p2@HAND2!0.73!4.41!HAND2;;chr19:40562072..40562143,-!p1@ZNF780B!0.72!43.81!ZNF780B;;chr19:37341752..37341816,+!p1@ZNF345!0.72!14.19!ZNF345;;chr8:86089417..86089440,+!p2@E2F5!0.72!9.06!E2F5;;chr19:38085768..38085821,+!p1@ZNF540!0.72!6.61!ZNF540;;chr19:57999101..57999158,+!p1@ZNF419!0.71!31.82!ZNF419;;chr12:7079780..7079791,-!p2@PHB2!0.71!24.47!PHB2;;chr6:126102292..126102329,+!p3@NCOA7!0.71!14.93!NCOA7;;chr19:38042240..38042309,+!p2@ZNF540!0.71!6.61!ZNF540;;chr12:54402745..54402788,+!p1@HOXC8!0.71!4.16!HOXC8;;chr14:36989940..36989957,-!p2@NKX2-1!0.71!4.16!NKX2-1;;chr19:58545454..58545498,+!p1@ZSCAN1!0.71!4.16!ZSCAN1;;chr3:141087393..141087426,+!p3@ZBTB38!0.70!17.62!ZBTB38;;chr19:56904880..56904919,-!p1@ZNF582!0.70!10.77!ZNF582;;chr8:60031762..60031803,-!p3@TOX!0.70!6.12!TOX;;chr15:96869114..96869160,+!p11@NR2F2!0.70!5.63!NR2F2;;chr3:170076314..170076334,+!p2@SKIL!0.70!5.38!SKIL;;chr6:126240463..126240489,+!p6@NCOA7!0.70!4.65!NCOA7;;chr11:65667884..65667895,-!p2@FOSL1!0.69!17.13!FOSL1;;chr19:58095501..58095535,+!p1@ZIK1!0.69!15.17!ZIK1;;chr2:185463247..185463263,+!p1@ZNF804A!0.69!7.34!ZNF804A;;chr17:46622440..46622477,-!p5@HOXB2!0.69!4.41!HOXB2;;chr15:67418177..67418204,+!p9@SMAD3!0.69!3.92!SMAD3;;chr17:41622731..41622764,-!p5@ETV4!0.69!3.92!ETV4;;chr19:22398533..22398542,-!p@chr19:22398533..22398542,-!0.69!3.92!ZNF676;;chr14:37051768..37051779,-!p4@NKX2-8!0.69!3.92!NKX2-8;;chr5:142780237..142780261,-!p7@NR3C1!0.69!3.92!NR3C1;;chr22:22874610..22874616,-!p1@ZNF280A!0.69!3.92!ZNF280A;;chr12:80084303..80084332,-!p1@PAWR!0.68!25.21!PAWR;;chr11:65687362..65687436,+!p3@DRAP1!0.68!19.58!DRAP1;;chr9:110252035..110252057,-!p1@KLF4!0.67!69.02!KLF4;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.67!42.09!GLIS2;;chr3:128206762..128206781,-!p2@GATA2!0.67!26.19!GATA2;;chr8:77593474..77593612,+!p1@ZFHX4!0.67!17.62!ZFHX4;;chr8:86089369..86089408,+!p1@E2F5!0.67!11.01!E2F5;;chr19:44331461..44331482,+!p3@ZNF283!0.67!6.36!ZNF283;;chr11:64764435..64764449,-!p1@BATF2!0.67!5.38!BATF2;;chr8:106330696..106330719,+!p2@ZFPM2!0.67!4.89!ZFPM2;;chr8:60031809..60031835,-!p4@TOX!0.67!4.89!TOX;;chr17:41622834..41622883,-!p6@ETV4!0.67!4.65!ETV4;;chr15:83953373..83953386,-!p2@BNC1!0.67!3.67!BNC1;;chr5:50679228..50679288,+!p1@ISL1!0.67!3.67!ISL1;;chr21:38071403..38071428,+!p2@SIM2!0.67!3.67!SIM2;;chr2:231084659..231084721,-!p1@SP110!0.65!95.69!SP110;;chr19:52598958..52599026,-!p1@ZNF841!0.65!38.42!ZNF841;;chr19:21106081..21106115,+!p2@ZNF85!0.65!11.50!ZNF85;;chr11:46299539..46299620,+!p2@CREB3L1!0.65!6.36!CREB3L1;;chr19:37407411..37407451,+!p3@ZNF568!0.65!4.65!ZNF568;;chr14:36989379..36989390,-!p8@NKX2-1!0.65!3.43!NKX2-1;;chr19:54024313..54024361,+!p7@ZNF331!0.65!3.43!ZNF331;;chr6:28321971..28321995,-!p1@ZNF323!0.65!3.43!ZNF323;;chr8:128748308..128748324,+!p2@MYC!0.64!111.36!MYC;;chr19:37958086..37958150,-!p1@ZNF569!0.64!14.93!ZNF569;;chr19:21512115..21512135,-!p3@ZNF708!0.64!7.59!ZNF708;;chr1:935398..935465,-!p2@HES4!0.64!7.59!HES4;;chr19:52956798..52956843,+!p1@ZNF578!0.64!7.34!ZNF578;;chr11:65686802..65686818,+!p6@DRAP1!0.64!6.36!DRAP1;;chr19:56904947..56904975,-!p2@ZNF582!0.64!6.12!ZNF582;;chr3:429476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chr8:128748470..128748487,+!p1@MYC!0.45!283.16!MYC;;chr19:56154958..56155027,+!p1@ZNF581!0.45!84.19!ZNF581;;chr19:57946684..57946723,+!p1@ZNF749!0.45!27.66!ZNF749;;chr5:138609782..138609826,+!p5@MATR3!0.45!15.91!MATR3;;chr6:34205372..34205412,+!p5@HMGA1!0.45!12.48!HMGA1;;chr12:54772960..54773015,-!p3@ZNF385A!0.45!11.99!ZNF385A;;chr8:102217679..102217719,-!p2@ZNF706!0.45!8.32!ZNF706;;chr8:125985531..125985571,+!p1@ZNF572!0.45!4.41!ZNF572;;chrX:48900782..48900793,-!p3@TFE3!0.45!4.16!TFE3;;chr7:6655225..6655279,+!p1@ENST00000457543!0.45!3.18!ZNF853;;chr13:73636516..73636532,+!p3@KLF5!0.45!2.20!KLF5;;chr20:30193083..30193098,+!p1@ID1!0.44!205.58!ID1;;chr5:142783175..142783297,-!p1@NR3C1!0.44!34.51!NR3C1;;chr20:49547691..49547724,-!p2@ADNP!0.44!14.93!ADNP;;chr19:45504688..45504782,+!p1@RELB!0.44!14.68!RELB;;chr2:70142232..70142251,+!p1@MXD1!0.44!13.46!MXD1;;chr15:96874244..96874259,+!p5@NR2F2!0.44!5.38!NR2F2;;chr18:3449720..3449749,+!p2@TGIF1!0.44!4.65!TGIF1;;chr2:200323414..200323455,-!p1@SATB2!0.44!4.65!SATB2;;chr7:64126535..64126559,+!p2@ZNF107!0.44!4.65!ZNF107;;chr3:40566488..40566502,+!p3@ZNF621!0.44!3.92!ZNF621;;chr13:27998871..27998884,+!p4@GTF3A!0.44!3.18!GTF3A;;chr17:46127997..46128015,+!p5@NFE2L1!0.44!2.69!NFE2L1;;chr17:46621101..46621143,-!p7@HOXB2!0.44!2.69!HOXB2;;chr19:50432453..50432468,+!p1@ATF5!0.43!138.52!ATF5;;chr3:185826855..185826911,-!p1@ETV5!0.43!67.55!ETV5;;chr8:146052918..146052975,+!p1@ZNF7!0.43!26.92!ZNF7;;chr10:94449703..94449718,+!p1@HHEX!0.43!8.81!HHEX;;chr15:71184724..71184778,-!p1@THAP10!0.43!8.57!THAP10;;chr21:30671690..30671762,+!p2@BACH1!0.43!7.59!BACH1;;chr19:53868940..53868990,+!p1@ZNF525,p2@ZNF765!0.43!6.36!ZNF525;;chr7:42276787..42276815,-!p1@GLI3!0.43!5.87!GLI3;;chr8:128750555..128750609,+!p5@MYC!0.43!4.16!MYC;;chr5:139494712..139494759,+!p5@PURA!0.43!3.43!PURA;;chr20:48807430..48807439,+!p8@CEBPB!0.43!2.94!CEBPB;;chr12:80084137..80084165,-!p10@PAWR!0.43!2.45!PAWR;;chr11:46299186..46299195,+!p3@CREB3L1!0.43!1.96!CREB3L1;;chr12:3068668..3068689,+!p7@TEAD4!0.43!1.71!TEAD4;;chr12:54348655..54348693,+!p1@HOXC12!0.43!1.71!HOXC12;;chr12:54394309..54394336,+!p2@HOXC9!0.43!1.71!HOXC9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.43!1.71!HOXC5;;chr19:52932435..52932443,+!p3@ZNF534!0.43!1.71!ZNF534;;chr1:2985760..2985774,+!p1@PRDM16!0.43!1.71!PRDM16;;chr21:38071462..38071474,+!p3@SIM2!0.43!1.71!SIM2;;chr17:46621146..46621180,-!p10@HOXB2!0.43!1.71!HOXB2;;chr17:46655578..46655589,-!p4@HOXB4!0.43!1.71!HOXB4;;chr17:46806067..46806097,-!p1@HOXB13!0.43!1.71!HOXB13;;chr19:22034784..22034801,-!p4@ZNF43!0.43!1.71!ZNF43;;chr19:2867298..2867317,+!p2@ZNF556!0.43!1.71!ZNF556;;chr19:33865223..33865254,+!p5@CEBPG!0.43!1.71!CEBPG;;chr19:37958064..37958076,-!p4@ZNF569!0.43!1.71!ZNF569;;chr5:142780280..142780294,-!p16@NR3C1!0.43!1.71!NR3C1;;chr6:10415484..10415508,-!p3@TFAP2A!0.43!1.71!TFAP2A;;chr6:36355431..36355466,-!p1@ETV7!0.43!1.71!ETV7;;chr7:101917447..101917479,+!p4@CUX1!0.43!1.71!CUX1;;chr17:46126136..46126152,+!p1@NFE2L1!0.42!123.35!NFE2L1;;chr12:56753869..56753930,-!p1@STAT2!0.42!105.97!STAT2;;chr19:20844368..20844407,-!p1@ZNF626!0.42!33.04!ZNF626;;chr19:53400852..53400962,-!p1@ZNF320!0.42!23.49!ZNF320;;chr20:42295713..42295738,+!p2@MYBL2!0.42!13.71!MYBL2;;chr12:2986206..2986258,-!p2@FOXM1!0.42!13.71!FOXM1;;chr19:57988878..57988941,-!p1@ZNF772!0.42!12.73!ZNF772;;chr3:23986824..23986848,+!p2@NR1D2!0.42!12.73!NR1D2;;chr9:35732647..35732678,+!p2@CREB3!0.42!12.73!CREB3;;chr17:56065729..56065781,-!p2@VEZF1!0.42!9.79!VEZF1;;chr19:38210622..38210681,-!p1@ZNF607!0.42!8.32!ZNF607;;chr12:10875351..10875422,-!p4@CSDA!0.42!3.92!CSDA;;chr15:96874063..96874074,+!p10@NR2F2!0.42!3.67!NR2F2;;chr15:96875657..96875760,+!p14@NR2F2!0.42!3.18!NR2F2;;chr19:33865009..33865090,+!p3@CEBPG!0.42!2.45!CEBPG;;chr19:57183114..57183145,-!p1@ZNF835!0.42!1.96!ZNF835;;chr8:144718171..144718244,+!p1@ZNF623!0.41!24.23!ZNF623;;chr22:38598086..38598105,+!p1@MAFF!0.41!24.23!MAFF;;chr3:141087339..141087387,+!p2@ZBTB38!0.41!23.74!ZBTB38;;chr12:2986275..2986363,-!p1@FOXM1!0.41!23.01!FOXM1;;chr19:56152437..56152467,+!p3@ZNF580!0.41!11.26!ZNF580;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.41!10.03!TAL1;;chr19:44576296..44576343,+!p2@ZNF284!0.41!8.57!ZNF284;;chr19:11959532..11959593,+!p1@ZNF439!0.41!8.32!ZNF439;;chr22:22863052..22863133,-!p1@ZNF280B!0.41!5.38!ZNF280B;;chr13:46543725..46543747,-!p2@ZC3H13!0.41!3.67!ZC3H13;;chr3:44626446..44626477,+!p1@ZNF660!0.41!3.43!ZNF660;;chr19:57791917..57791937,+!p4@ZNF460!0.41!3.43!ZNF460;;chr2:121493492..121493537,+!p2@GLI2!0.41!3.18!GLI2;;chr19:56152471..56152482,+!p6@ZNF580!0.41!2.94!ZNF580;;chr8:128750493..128750522,+!p10@MYC!0.41!2.69!MYC;;chr6:32095523..32095564,-!p2@ATF6B!0.41!2.45!ATF6B;;chr16:69600209..69600234,+!p4@NFAT5!0.41!2.20!NFAT5;;chr5:92920456..92920488,+!p9@NR2F1!0.41!1.96!NR2F1;;chr4:124374..124410,+!p2@ZNF718!0.40!23.25!ZNF718;;chr5:176738887..176738934,-!p1@MXD3!0.40!14.68!MXD3;;chr16:30537839..30537929,-!p1@ZNF768!0.40!13.71!ZNF768;;chr19:58459047..58459083,-!p1@ZNF256!0.40!10.52!ZNF256;;chr19:37569314..37569381,+!p1@ZNF420!0.40!7.59!ZNF420;;chr19:22034809..22034878,-!p2@ZNF43!0.40!7.34!ZNF43;;chr4:4291837..4291859,-!p2@LYAR!0.40!6.85!LYAR;;chr19:45252008..45252024,+!p2@BCL3!0.40!6.85!BCL3;;chr7:19157248..19157268,-!p1@TWIST1!0.40!5.63!TWIST1;;chr10:94449675..94449694,+!p2@HHEX!0.40!5.38!HHEX;;chr16:3185125..3185173,+!p1@ZNF213!0.40!5.14!ZNF213;;chr12:133656995..133657049,+!p2@ZNF140!0.40!4.89!ZNF140;;chr7:27135591..27135658,-!p1@HOXA1!0.40!3.67!HOXA1;;chr10:35415951..35415975,+!p8@CREM!0.40!2.45!CREM;;chr4:146859887..146859921,-!p3@ZNF827!0.40!2.45!ZNF827;;chr1:45805907..45805918,+!p5@TOE1!0.40!2.20!TOE1;;chr8:128752734..128752763,+!p13@MYC!0.40!1.96!MYC;;chr22:29196547..29196563,-!p2@XBP1!0.39!82.23!XBP1;;chr19:50169013..50169062,-!p2@IRF3!0.39!12.24!IRF3;;chr6:151712673..151712709,-!p1@ZBTB2!0.39!12.24!ZBTB2;;chr5:43120995..43121052,+!p1@ZNF131!0.39!10.77!ZNF131;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.39!10.28!ZNF20;;chr8:128750654..128750793,+!p3@MYC!0.39!8.32!MYC;;chr7:28448965..28448994,+!p2@CREB5!0.39!7.10!CREB5;;chr14:45722287..45722308,-!p2@MIS18BP1!0.39!5.14!MIS18BP1;;chr19:56879472..56879529,+!p2@ZNF542!0.39!4.16!ZNF542;;chr12:133706820..133706881,-!p1@ZNF891!0.39!3.92!ZNF891;;chr5:150284532..150284549,-!p1@ZNF300!0.39!3.92!ZNF300;;chr19:58570605..58570655,+!p1@ZNF135!0.39!3.18!ZNF135;;chr17:38792325..38792330,-!p3@SMARCE1!0.39!2.45!SMARCE1;;chr5:142783365..142783379,-!p10@NR3C1!0.39!2.20!NR3C1;;chr6:151712968..151712992,-!p5@ZBTB2!0.39!2.20!ZBTB2;;chr4:81104985..81105005,+!p4@PRDM8!0.39!1.96!PRDM8;;chr2:172949484..172949522,+!p1@DLX1!0.39!1.47!DLX1;;chr2:185463158..185463181,+!p2@ZNF804A!0.39!1.47!ZNF804A;;chr6:1612300..1612324,+!p3@FOXC1!0.39!1.47!FOXC1;;chr7:27183263..27183284,-!p2@HOXA5!0.39!1.47!HOXA5;;chr8:10588010..10588030,-!p1@SOX7!0.39!1.47!SOX7;;chr8:23564065..23564087,-!p1@NKX2-6!0.39!1.47!NKX2-6;;chr8:86089498..86089519,+!p6@E2F5!0.39!1.47!E2F5;;chr15:96869165..96869183,+!p20@NR2F2!0.39!1.47!NR2F2;;chr19:20278043..20278054,+!p2@ZNF486!0.39!1.47!ZNF486;;chr19:22469215..22469229,+!p2@ZNF729!0.39!1.47!ZNF729;;chr12:54447868..54447892,+!p6@HOXC6,p7@HOXC4!0.39!1.47!HOXC6;;chr14:36988882..36988895,-!p13@NKX2-1!0.39!1.47!NKX2-1;;chr14:37131058..37131139,+!p1@PAX9!0.39!1.47!PAX9;;chr11:12695944..12695989,+!p1@TEAD1!0.38!78.32!TEAD1;;chr6:44233252..44233296,-!p1@NFKBIE!0.38!21.05!NFKBIE;;chr16:30406721..30406820,+!p1@ZNF48!0.38!11.26!ZNF48;;chr19:58662139..58662182,-!p1@ZNF329!0.38!9.79!ZNF329;;chr19:15543565..15543579,-!p2@WIZ!0.38!9.06!WIZ;;chr19:53758094..53758147,-!p1@ZNF677!0.38!7.59!ZNF677;;chr19:52391147..52391218,-!p1@ZNF577!0.38!6.12!ZNF577;;chr5:178450797..178450814,+!p1@ZNF879!0.38!5.14!ZNF879;;chr16:86600426..86600441,+!p1@FOXC2!0.38!4.65!FOXC2;;chr18:3450293..3450304,+!p4@TGIF1!0.38!4.65!TGIF1;;chr19:37407172..37407217,-!p2@ZNF829!0.38!3.18!ZNF829;;chr12:80085061..80085119,-!p6@PAWR!0.38!2.69!PAWR;;chr16:4323323..4323333,-!p4@TFAP4!0.38!1.96!TFAP4;;chr18:45457909..45457939,-!p8@SMAD2!0.38!1.96!SMAD2;;chr19:19303794..19303805,+!p5@RFXANK!0.38!1.71!RFXANK;;chr19:40503013..40503044,+!p3@ZNF546!0.38!1.71!ZNF546;;chr14:24630465..24630531,+!p1@IRF9!0.37!81.25!IRF9;;chr16:4322832..4322907,-!p1@TFAP4!0.37!15.66!TFAP4;;chr14:74353576..74353589,+!p3@ZNF410!0.37!6.61!ZNF410;;chr19:37709076..37709154,+!p1@ZNF383!0.37!6.36!ZNF383;;chr22:42666593..42666623,-!p@chr22:42666593..42666623,-!0.37!4.16!TCF20;;chr18:3448455..3448480,+!p5@TGIF1!0.37!3.18!TGIF1;;chr4:87857474..87857489,+!p7@AFF1!0.37!2.94!AFF1;;chr16:29818199..29818216,+!p11@MAZ!0.37!2.69!MAZ;;chr19:54024251..54024305,+!p4@ZNF331!0.37!2.69!ZNF331;;chr13:46543346..46543367,-!p9@ZC3H13!0.37!1.96!ZC3H13;;chr11:10876220..10876224,-!p3@ZBED5!0.37!1.71!ZBED5;;chr2:219524193..219524205,-!p3@ZNF142!0.37!1.71!ZNF142;;chr17:41623259..41623278,-!p7@ETV4!0.37!1.71!ETV4;;chr4:146859927..146860055,-!p1@ZNF827!0.36!11.99!ZNF827;;chr19:37701396..37701453,-!p1@ZNF585B!0.36!11.26!ZNF585B;;chr2:28616358..28616380,+!p3@FOSL2!0.36!10.28!FOSL2;;chrX:83757450..83757485,-!p1@HDX!0.36!8.32!HDX;;chr3:44754126..44754171,+!p1@ZNF502!0.36!4.41!ZNF502;;chr19:33864571..33864596,+!p2@CEBPG!0.36!4.41!CEBPG;;chr6:151712800..151712835,-!p2@ZBTB2!0.36!3.92!ZBTB2;;chr8:128750175..128750201,+!p8@MYC!0.36!2.94!MYC;;chr2:46524878..46524891,+!p3@EPAS1!0.36!2.94!EPAS1;;chr5:178450829..178450853,+!p2@ZNF879!0.36!2.20!ZNF879;;chr19:56152503..56152514,+!p7@ZNF580!0.36!2.20!ZNF580;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.36!2.20!TGIF2;;chr13:46542074..46542106,-!p6@ZC3H13!0.36!1.96!ZC3H13;;chr3:141121369..141121392,+!p14@ZBTB38!0.36!1.71!ZBTB38;;chr2:231280908..231280945,+!p1@SP100!0.35!78.56!SP100;;chr10:104155480..104155534,+!p2@NFKB2!0.35!12.48!NFKB2;;chr6:20402102..20402152,+!p1@E2F3!0.35!7.59!E2F3;;chr17:4890695..4890773,-!p2@CAMTA2!0.35!5.63!CAMTA2;;chr15:41913690..41913753,+!p2@MGA!0.35!4.16!MGA;;chr1:45805872..45805900,+!p2@TOE1!0.35!4.16!TOE1;;chr15:96874145..96874166,+!p7@NR2F2!0.35!3.18!NR2F2;;chr1:247171347.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|ffid_belonging_in_development=CL:0000222
|fonse_cell_line=FF:0102424
|fonse_cell_line=FF:0102424
|fonse_cell_line_closure=FF:0102424
|fonse_cell_line_closure=FF:0102424
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
|created_by=
|creation_date=
|def=
|has_quality=
|has_quality=
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102424
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aMero-82.CNhs13069.10853-111F7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aMero-82.CNhs13069.10853-111F7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aMero-82.CNhs13069.10853-111F7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aMero-82.CNhs13069.10853-111F7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aMero-82.CNhs13069.10853-111F7.hg38.nobarcode.ctss.bed.gz
|id=FF:10853-111F7
|is_a=EFO:0002091;;FF:0000210;;FF:0102424
|is_obsolete=
|library_id=CNhs13069
|library_id_phase_based=2:CNhs13069
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10853
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10853
|name=mesothelioma cell line:Mero-82
|namespace=FANTOM5
|namespace=FANTOM5
|part_of=
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs13069,LSID1000,release012,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=111
|rna_catalog_number=
|rna_concentration=1.575
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.1
|rna_od260/280=2.06
|rna_position=F7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=111F7
|rna_weight_ug=118.2
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=9100105
|sample_cell_line=Mero-82
|sample_cell_lot=
|sample_cell_type=mesothelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=ECACC
|sample_description=
|sample_dev_stage=
|sample_disease=mesothelioma
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.66671300190548e-282!GO:0043231;intracellular membrane-bound organelle;5.99260441078723e-241!GO:0043227;membrane-bound organelle;8.51524083712059e-241!GO:0043226;organelle;2.1409831933214e-235!GO:0043229;intracellular organelle;8.15851205090051e-235!GO:0005737;cytoplasm;1.20728491997558e-167!GO:0044422;organelle part;1.93164886280292e-142!GO:0044446;intracellular organelle part;4.5846123372783e-141!GO:0005634;nucleus;3.0451849896995e-128!GO:0044237;cellular metabolic process;5.38685515985815e-118!GO:0044238;primary metabolic process;1.37244740107696e-117!GO:0043170;macromolecule metabolic process;3.9416206008082e-117!GO:0044444;cytoplasmic part;5.44307025047994e-114!GO:0032991;macromolecular complex;1.16358531789165e-103!GO:0030529;ribonucleoprotein complex;2.54054093772674e-92!GO:0044428;nuclear part;3.57893256799974e-85!GO:0003723;RNA binding;2.04083419946818e-82!GO:0043233;organelle lumen;5.90952834640241e-80!GO:0031974;membrane-enclosed lumen;5.90952834640241e-80!GO:0043283;biopolymer metabolic process;1.81689916747588e-79!GO:0005515;protein binding;1.46905924606709e-77!GO:0010467;gene expression;9.39724577806647e-76!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.87237666579451e-75!GO:0005739;mitochondrion;5.06940184990895e-64!GO:0006396;RNA processing;1.52633586549035e-56!GO:0006412;translation;2.38114369108672e-56!GO:0003676;nucleic acid binding;8.67241776032163e-55!GO:0005840;ribosome;7.22207714093734e-54!GO:0019538;protein metabolic process;2.33348453845012e-52!GO:0031981;nuclear lumen;2.63700060836787e-52!GO:0043234;protein complex;1.09993604078931e-50!GO:0016043;cellular component organization and biogenesis;2.72769455505407e-50!GO:0044267;cellular protein metabolic process;9.90519634086069e-48!GO:0044260;cellular macromolecule metabolic process;6.20915217202983e-47!GO:0003735;structural constituent of ribosome;2.14280859266004e-46!GO:0016070;RNA metabolic process;2.39967366022207e-43!GO:0033036;macromolecule localization;4.96312862240689e-43!GO:0015031;protein transport;3.209233024345e-42!GO:0016071;mRNA metabolic process;3.40548225207561e-42!GO:0033279;ribosomal subunit;2.71460497191912e-41!GO:0031090;organelle membrane;9.32986047852257e-41!GO:0044429;mitochondrial part;5.4920909737764e-40!GO:0009059;macromolecule biosynthetic process;7.75928514725374e-40!GO:0044249;cellular biosynthetic process;2.05100388223147e-39!GO:0008104;protein localization;4.40576799225116e-39!GO:0008380;RNA splicing;7.2222295251026e-39!GO:0045184;establishment of protein localization;7.50990964099392e-39!GO:0005829;cytosol;4.54424694675031e-38!GO:0031967;organelle envelope;1.71702115948758e-37!GO:0006996;organelle organization and biogenesis;2.00633655382816e-37!GO:0009058;biosynthetic process;2.54830639521894e-37!GO:0031975;envelope;3.88244955469038e-37!GO:0043228;non-membrane-bound organelle;7.27730273332222e-37!GO:0043232;intracellular non-membrane-bound organelle;7.27730273332222e-37!GO:0006397;mRNA processing;7.77787397114368e-36!GO:0046907;intracellular transport;1.01464843289307e-35!GO:0065003;macromolecular complex assembly;1.10529460358779e-35!GO:0006259;DNA metabolic process;8.16402621873233e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.24881481593107e-34!GO:0022607;cellular component assembly;8.7405643729651e-33!GO:0005654;nucleoplasm;3.87145302514812e-31!GO:0006886;intracellular protein transport;1.76450749424206e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.63218466651949e-29!GO:0007049;cell cycle;2.7529511761716e-28!GO:0005681;spliceosome;1.91636710185094e-27!GO:0000166;nucleotide binding;2.58878227944795e-27!GO:0044451;nucleoplasm part;2.19966684285837e-25!GO:0005740;mitochondrial envelope;2.72266574530197e-24!GO:0005730;nucleolus;6.00530551700122e-24!GO:0019866;organelle inner membrane;1.61707087386415e-23!GO:0051649;establishment of cellular localization;3.37502155852e-23!GO:0044445;cytosolic part;3.43100574437391e-23!GO:0016462;pyrophosphatase activity;3.69931683720366e-23!GO:0031966;mitochondrial membrane;4.91622083464568e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.10533523261617e-23!GO:0017111;nucleoside-triphosphatase activity;6.29157260753957e-23!GO:0051641;cellular localization;6.96232283985666e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;7.062902444674e-23!GO:0015934;large ribosomal subunit;2.26820155404337e-22!GO:0005743;mitochondrial inner membrane;1.22557330023596e-21!GO:0016874;ligase activity;1.24033009176422e-21!GO:0022402;cell cycle process;2.07354284591491e-21!GO:0006512;ubiquitin cycle;2.07354284591491e-21!GO:0050794;regulation of cellular process;3.41741494669697e-21!GO:0006119;oxidative phosphorylation;4.30072572526659e-21!GO:0008134;transcription factor binding;5.18784035301049e-21!GO:0015935;small ribosomal subunit;4.68326053456191e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;5.98176774781714e-20!GO:0019941;modification-dependent protein catabolic process;6.68587701082145e-20!GO:0043632;modification-dependent macromolecule catabolic process;6.68587701082145e-20!GO:0006457;protein folding;6.98051701805768e-20!GO:0005694;chromosome;7.53779959023605e-20!GO:0000278;mitotic cell cycle;1.0900109271166e-19!GO:0032553;ribonucleotide binding;1.09798782165046e-19!GO:0032555;purine ribonucleotide binding;1.09798782165046e-19!GO:0044455;mitochondrial membrane part;1.28933264134331e-19!GO:0006511;ubiquitin-dependent protein catabolic process;1.80114992878591e-19!GO:0044257;cellular protein catabolic process;1.86015398374673e-19!GO:0031980;mitochondrial lumen;5.10707065533235e-19!GO:0005759;mitochondrial matrix;5.10707065533235e-19!GO:0044265;cellular macromolecule catabolic process;6.45437517026724e-19!GO:0017076;purine nucleotide binding;1.16165952201771e-18!GO:0006974;response to DNA damage stimulus;1.28081146056736e-18!GO:0044427;chromosomal part;4.00251028906732e-18!GO:0022618;protein-RNA complex assembly;4.97890680226377e-18!GO:0043285;biopolymer catabolic process;5.10774833329439e-18!GO:0000502;proteasome complex (sensu Eukaryota);7.23038101676589e-18!GO:0042254;ribosome biogenesis and assembly;2.38002840649748e-17!GO:0005524;ATP binding;2.98617595515596e-17!GO:0051276;chromosome organization and biogenesis;3.87696024585625e-17!GO:0019222;regulation of metabolic process;5.57311572090833e-17!GO:0032559;adenyl ribonucleotide binding;1.04264098696915e-16!GO:0006605;protein targeting;1.27451331213213e-16!GO:0008135;translation factor activity, nucleic acid binding;2.04842161009908e-16!GO:0048770;pigment granule;2.15147357029007e-16!GO:0042470;melanosome;2.15147357029007e-16!GO:0005761;mitochondrial ribosome;2.92020377806403e-16!GO:0000313;organellar ribosome;2.92020377806403e-16!GO:0012505;endomembrane system;3.18622633263267e-16!GO:0000087;M phase of mitotic cell cycle;3.29820475527396e-16!GO:0007067;mitosis;4.37529628301603e-16!GO:0030163;protein catabolic process;4.870652481116e-16!GO:0009057;macromolecule catabolic process;1.15443288673564e-15!GO:0022403;cell cycle phase;1.26621525941053e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.39267557524272e-15!GO:0006281;DNA repair;1.43051927211845e-15!GO:0005746;mitochondrial respiratory chain;1.73918225785274e-15!GO:0030554;adenyl nucleotide binding;1.7527705847089e-15!GO:0050789;regulation of biological process;2.02623296994838e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.99259919459444e-15!GO:0051301;cell division;7.50356150121087e-15!GO:0051082;unfolded protein binding;1.00117121797825e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.3134624378405e-14!GO:0003954;NADH dehydrogenase activity;1.3134624378405e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.3134624378405e-14!GO:0006366;transcription from RNA polymerase II promoter;1.9165015718186e-14!GO:0003712;transcription cofactor activity;2.02131439273682e-14!GO:0005635;nuclear envelope;5.96623208418315e-14!GO:0012501;programmed cell death;7.03599134029016e-14!GO:0044248;cellular catabolic process;7.25929233995748e-14!GO:0043412;biopolymer modification;7.85017551006329e-14!GO:0031323;regulation of cellular metabolic process;8.50379682392973e-14!GO:0005783;endoplasmic reticulum;8.71832696921869e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.44772837124554e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;1.23093875787947e-13!GO:0006350;transcription;1.48773170920298e-13!GO:0006915;apoptosis;1.66736291763445e-13!GO:0031965;nuclear membrane;1.867572319278e-13!GO:0000279;M phase;1.867572319278e-13!GO:0044453;nuclear membrane part;2.14421030248373e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.84995741540937e-13!GO:0000375;RNA splicing, via transesterification reactions;2.84995741540937e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.84995741540937e-13!GO:0016887;ATPase activity;5.01422040099315e-13!GO:0006260;DNA replication;5.02851208450158e-13!GO:0006323;DNA packaging;5.04986489135776e-13!GO:0042775;organelle ATP synthesis coupled electron transport;6.7189941419723e-13!GO:0042773;ATP synthesis coupled electron transport;6.7189941419723e-13!GO:0030964;NADH dehydrogenase complex (quinone);7.87530862640967e-13!GO:0045271;respiratory chain complex I;7.87530862640967e-13!GO:0005747;mitochondrial respiratory chain complex I;7.87530862640967e-13!GO:0051186;cofactor metabolic process;8.23952447541498e-13!GO:0065004;protein-DNA complex assembly;9.15661456809479e-13!GO:0006399;tRNA metabolic process;1.16039586238881e-12!GO:0009719;response to endogenous stimulus;1.1606749878777e-12!GO:0016604;nuclear body;1.17419311824482e-12!GO:0006913;nucleocytoplasmic transport;1.23439573750159e-12!GO:0048193;Golgi vesicle transport;1.36248422279499e-12!GO:0008219;cell death;2.02337013124212e-12!GO:0016265;death;2.02337013124212e-12!GO:0042623;ATPase activity, coupled;2.13294409244954e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.31953656202619e-12!GO:0006464;protein modification process;2.4660002764198e-12!GO:0004386;helicase activity;2.68114890922687e-12!GO:0003743;translation initiation factor activity;3.85865106797831e-12!GO:0051169;nuclear transport;4.38875681428415e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.43692026084106e-12!GO:0008639;small protein conjugating enzyme activity;4.53332263888685e-12!GO:0005643;nuclear pore;5.31176762958057e-12!GO:0005794;Golgi apparatus;7.39664423957591e-12!GO:0010468;regulation of gene expression;7.65989419567882e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.87011819301112e-12!GO:0006364;rRNA processing;7.87011819301112e-12!GO:0044432;endoplasmic reticulum part;7.97759742570658e-12!GO:0004842;ubiquitin-protein ligase activity;1.12064070880857e-11!GO:0016072;rRNA metabolic process;1.40337099110401e-11!GO:0006413;translational initiation;1.98711704209236e-11!GO:0043687;post-translational protein modification;2.33027300579962e-11!GO:0006333;chromatin assembly or disassembly;2.48124406632329e-11!GO:0065002;intracellular protein transport across a membrane;2.57328748644233e-11!GO:0019787;small conjugating protein ligase activity;4.05454980938419e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.87474800220516e-11!GO:0051726;regulation of cell cycle;5.97267798694182e-11!GO:0032774;RNA biosynthetic process;6.931568756614e-11!GO:0000074;regulation of progression through cell cycle;7.77455553624263e-11!GO:0000785;chromatin;8.07799506413314e-11!GO:0006351;transcription, DNA-dependent;8.07799506413314e-11!GO:0050657;nucleic acid transport;1.13638629030155e-10!GO:0051236;establishment of RNA localization;1.13638629030155e-10!GO:0050658;RNA transport;1.13638629030155e-10!GO:0006403;RNA localization;1.19497046276921e-10!GO:0006446;regulation of translational initiation;1.88236961977662e-10!GO:0006732;coenzyme metabolic process;2.86955488126702e-10!GO:0008026;ATP-dependent helicase activity;3.06353628268416e-10!GO:0046930;pore complex;3.15378094903076e-10!GO:0016192;vesicle-mediated transport;3.18763954584621e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.93075249148723e-10!GO:0004812;aminoacyl-tRNA ligase activity;5.93075249148723e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.93075249148723e-10!GO:0045449;regulation of transcription;7.03688824512819e-10!GO:0065007;biological regulation;7.87831630763156e-10!GO:0016607;nuclear speck;1.01241475726337e-09!GO:0003677;DNA binding;1.12369530964263e-09!GO:0006334;nucleosome assembly;1.36214182776902e-09!GO:0017038;protein import;1.44772905339568e-09!GO:0043067;regulation of programmed cell death;1.48901999805487e-09!GO:0016881;acid-amino acid ligase activity;1.5243264893095e-09!GO:0043038;amino acid activation;1.82027599836025e-09!GO:0006418;tRNA aminoacylation for protein translation;1.82027599836025e-09!GO:0043039;tRNA aminoacylation;1.82027599836025e-09!GO:0042981;regulation of apoptosis;2.33754483747591e-09!GO:0008565;protein transporter activity;2.49864869319253e-09!GO:0048523;negative regulation of cellular process;3.76430817234403e-09!GO:0006461;protein complex assembly;3.76669831090534e-09!GO:0009055;electron carrier activity;3.79353878085509e-09!GO:0009259;ribonucleotide metabolic process;3.93852361145349e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.34992903534561e-09!GO:0005793;ER-Golgi intermediate compartment;6.1962178220405e-09!GO:0031497;chromatin assembly;6.62936757065316e-09!GO:0006163;purine nucleotide metabolic process;7.35482545897004e-09!GO:0030532;small nuclear ribonucleoprotein complex;7.92700256963351e-09!GO:0051028;mRNA transport;9.2853553390549e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.17664167474399e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.51245147104534e-08!GO:0007005;mitochondrion organization and biogenesis;1.84090820962313e-08!GO:0016563;transcription activator activity;1.90612607555343e-08!GO:0006355;regulation of transcription, DNA-dependent;2.00015967472835e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.09030087467543e-08!GO:0016564;transcription repressor activity;2.0961603379844e-08!GO:0003697;single-stranded DNA binding;2.13897884306372e-08!GO:0009150;purine ribonucleotide metabolic process;2.17480922302084e-08!GO:0006164;purine nucleotide biosynthetic process;2.30411545591357e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.56261067741578e-08!GO:0005789;endoplasmic reticulum membrane;2.74117326127502e-08!GO:0009260;ribonucleotide biosynthetic process;2.7668263439404e-08!GO:0003714;transcription corepressor activity;3.68670631478381e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.79785505066947e-08!GO:0016779;nucleotidyltransferase activity;6.01839847735522e-08!GO:0015630;microtubule cytoskeleton;6.19860976566061e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.67024335628085e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.10627117739183e-08!GO:0048519;negative regulation of biological process;8.22104120349579e-08!GO:0009199;ribonucleoside triphosphate metabolic process;8.636013355558e-08!GO:0005667;transcription factor complex;9.66703245309822e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.92939562790384e-08!GO:0015986;ATP synthesis coupled proton transport;1.189701856671e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.189701856671e-07!GO:0009141;nucleoside triphosphate metabolic process;1.26342044304401e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.2639814856568e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.2639814856568e-07!GO:0051246;regulation of protein metabolic process;1.31082340174372e-07!GO:0043623;cellular protein complex assembly;1.31302188551952e-07!GO:0043566;structure-specific DNA binding;1.31302188551952e-07!GO:0004298;threonine endopeptidase activity;1.32477621558409e-07!GO:0032446;protein modification by small protein conjugation;1.38626461137289e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.66416902676342e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.75327532195925e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.75327532195925e-07!GO:0009056;catabolic process;1.98504832828183e-07!GO:0016567;protein ubiquitination;2.06937054347198e-07!GO:0003924;GTPase activity;2.60622338861773e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.66456565875446e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.66456565875446e-07!GO:0043069;negative regulation of programmed cell death;3.02056045573144e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.96163901055145e-07!GO:0051188;cofactor biosynthetic process;4.40054560324148e-07!GO:0016568;chromatin modification;4.50367487663909e-07!GO:0005819;spindle;5.04220931957611e-07!GO:0019829;cation-transporting ATPase activity;6.8398827045002e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.9297992744571e-07!GO:0030120;vesicle coat;8.09724863593385e-07!GO:0030662;coated vesicle membrane;8.09724863593385e-07!GO:0051170;nuclear import;8.11915377297061e-07!GO:0043066;negative regulation of apoptosis;8.62047800024214e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.02906484926469e-06!GO:0003713;transcription coactivator activity;1.04677881159837e-06!GO:0006916;anti-apoptosis;1.11458370245048e-06!GO:0046034;ATP metabolic process;1.32062901862959e-06!GO:0008270;zinc ion binding;1.41227481201198e-06!GO:0005768;endosome;1.67425558046727e-06!GO:0006754;ATP biosynthetic process;1.67985218823804e-06!GO:0006753;nucleoside phosphate metabolic process;1.67985218823804e-06!GO:0000775;chromosome, pericentric region;1.76839883016426e-06!GO:0006261;DNA-dependent DNA replication;2.10334918775825e-06!GO:0009060;aerobic respiration;2.26180926498539e-06!GO:0006606;protein import into nucleus;2.61916760040712e-06!GO:0000151;ubiquitin ligase complex;2.6727712904448e-06!GO:0009117;nucleotide metabolic process;2.68109340822249e-06!GO:0051427;hormone receptor binding;3.44067196356168e-06!GO:0006752;group transfer coenzyme metabolic process;3.90551387634784e-06!GO:0000245;spliceosome assembly;4.33893412986874e-06!GO:0005762;mitochondrial large ribosomal subunit;4.33893412986874e-06!GO:0000315;organellar large ribosomal subunit;4.33893412986874e-06!GO:0031324;negative regulation of cellular metabolic process;4.3632437823652e-06!GO:0048475;coated membrane;4.57721495114755e-06!GO:0030117;membrane coat;4.57721495114755e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.93397284748171e-06!GO:0045259;proton-transporting ATP synthase complex;4.94822574428801e-06!GO:0006414;translational elongation;6.67377728246545e-06!GO:0045333;cellular respiration;7.21758341658225e-06!GO:0035257;nuclear hormone receptor binding;7.68547667830121e-06!GO:0009108;coenzyme biosynthetic process;8.51753423662761e-06!GO:0003899;DNA-directed RNA polymerase activity;9.86632142492638e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.10867222457611e-05!GO:0005813;centrosome;1.12451686846374e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.33661360415875e-05!GO:0007051;spindle organization and biogenesis;1.50263487072962e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.57678293609004e-05!GO:0016740;transferase activity;1.64290119761147e-05!GO:0005788;endoplasmic reticulum lumen;1.68276884999884e-05!GO:0051168;nuclear export;1.84514887195157e-05!GO:0003724;RNA helicase activity;2.01680307669193e-05!GO:0005815;microtubule organizing center;2.17521086473627e-05!GO:0048522;positive regulation of cellular process;2.25683858685411e-05!GO:0005525;GTP binding;2.36459409320057e-05!GO:0000786;nucleosome;2.60364975354324e-05!GO:0000314;organellar small ribosomal subunit;3.14591427184092e-05!GO:0005763;mitochondrial small ribosomal subunit;3.14591427184092e-05!GO:0006613;cotranslational protein targeting to membrane;3.26816898830939e-05!GO:0006099;tricarboxylic acid cycle;4.74499099683128e-05!GO:0046356;acetyl-CoA catabolic process;4.74499099683128e-05!GO:0046914;transition metal ion binding;4.83706905572854e-05!GO:0006793;phosphorus metabolic process;4.96299878251344e-05!GO:0006796;phosphate metabolic process;4.96299878251344e-05!GO:0051329;interphase of mitotic cell cycle;5.37665770916648e-05!GO:0009892;negative regulation of metabolic process;5.87786015242802e-05!GO:0045786;negative regulation of progression through cell cycle;6.77808546072858e-05!GO:0051789;response to protein stimulus;7.37531309051587e-05!GO:0006986;response to unfolded protein;7.37531309051587e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.86708880817532e-05!GO:0051325;interphase;7.9837705469525e-05!GO:0016481;negative regulation of transcription;8.28832497785158e-05!GO:0009109;coenzyme catabolic process;8.57009064366837e-05!GO:0016787;hydrolase activity;8.57009064366837e-05!GO:0051187;cofactor catabolic process;8.74705062753936e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.74705062753936e-05!GO:0044452;nucleolar part;8.98745747562545e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.5511374417605e-05!GO:0008033;tRNA processing;0.000106967340143751!GO:0043021;ribonucleoprotein binding;0.000114229460190119!GO:0006626;protein targeting to mitochondrion;0.000119658928143824!GO:0031988;membrane-bound vesicle;0.000126573892010986!GO:0006383;transcription from RNA polymerase III promoter;0.000134380989047023!GO:0044440;endosomal part;0.000134380989047023!GO:0010008;endosome membrane;0.000134380989047023!GO:0016023;cytoplasmic membrane-bound vesicle;0.000134380989047023!GO:0000075;cell cycle checkpoint;0.000135334153970878!GO:0008654;phospholipid biosynthetic process;0.000136142835470834!GO:0030867;rough endoplasmic reticulum membrane;0.00014823993268196!GO:0045454;cell redox homeostasis;0.000154985396460968!GO:0005798;Golgi-associated vesicle;0.000161645241075118!GO:0045941;positive regulation of transcription;0.00016238889139311!GO:0003729;mRNA binding;0.000168401345754505!GO:0006084;acetyl-CoA metabolic process;0.000178141197291125!GO:0005770;late endosome;0.000183356836004106!GO:0016310;phosphorylation;0.000190689164197469!GO:0006612;protein targeting to membrane;0.000193744005003955!GO:0005657;replication fork;0.000201332151450951!GO:0032561;guanyl ribonucleotide binding;0.000203338518132814!GO:0019001;guanyl nucleotide binding;0.000203338518132814!GO:0031072;heat shock protein binding;0.000206298887690306!GO:0008361;regulation of cell size;0.000207980911534596!GO:0016363;nuclear matrix;0.000216635222984629!GO:0007243;protein kinase cascade;0.000240792415935365!GO:0016049;cell growth;0.000246562363052415!GO:0003684;damaged DNA binding;0.000266462171070966!GO:0005905;coated pit;0.00027908120795868!GO:0008186;RNA-dependent ATPase activity;0.000284208241110481!GO:0000059;protein import into nucleus, docking;0.000297844703253963!GO:0043681;protein import into mitochondrion;0.000322993210265887!GO:0044431;Golgi apparatus part;0.000332528356449089!GO:0006839;mitochondrial transport;0.000347259016857981!GO:0006352;transcription initiation;0.000355582134699141!GO:0006302;double-strand break repair;0.000383985420043354!GO:0006401;RNA catabolic process;0.000412777718397853!GO:0008094;DNA-dependent ATPase activity;0.000427286951715325!GO:0003690;double-stranded DNA binding;0.000427286951715325!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000432825525063987!GO:0006402;mRNA catabolic process;0.000483760368183454!GO:0045893;positive regulation of transcription, DNA-dependent;0.000492808934826441!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000495118150172898!GO:0001558;regulation of cell growth;0.00049984696576253!GO:0016859;cis-trans isomerase activity;0.000511629029518282!GO:0030880;RNA polymerase complex;0.000527857445040238!GO:0016853;isomerase activity;0.000528195140333402!GO:0031982;vesicle;0.000565316514450066!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000592018497796158!GO:0051052;regulation of DNA metabolic process;0.000596832870564796!GO:0005885;Arp2/3 protein complex;0.000615714521730462!GO:0004527;exonuclease activity;0.000647482214247601!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000655276239317801!GO:0005048;signal sequence binding;0.000671610608878869!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000691239796173276!GO:0003682;chromatin binding;0.000711714596452492!GO:0031410;cytoplasmic vesicle;0.000734031057233175!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000803215455598699!GO:0015399;primary active transmembrane transporter activity;0.000803215455598699!GO:0051252;regulation of RNA metabolic process;0.000803381385703967!GO:0005773;vacuole;0.000803381385703967!GO:0033116;ER-Golgi intermediate compartment membrane;0.000828747285626564!GO:0004004;ATP-dependent RNA helicase activity;0.000840955429058462!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000846207952249998!GO:0007088;regulation of mitosis;0.000851895031291283!GO:0009615;response to virus;0.000865923249007248!GO:0000049;tRNA binding;0.000866207160609839!GO:0008632;apoptotic program;0.000882316350849435!GO:0042802;identical protein binding;0.000904868421804911!GO:0008250;oligosaccharyl transferase complex;0.000978254114800959!GO:0006891;intra-Golgi vesicle-mediated transport;0.000978254114800959!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00100942912704522!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00100942912704522!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00100942912704522!GO:0007059;chromosome segregation;0.00106123318501216!GO:0031252;leading edge;0.00108208177041707!GO:0003746;translation elongation factor activity;0.00109260327601124!GO:0003702;RNA polymerase II transcription factor activity;0.00109260327601124!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00112188528214605!GO:0000428;DNA-directed RNA polymerase complex;0.00112188528214605!GO:0004576;oligosaccharyl transferase activity;0.00124068688916771!GO:0000776;kinetochore;0.00131331653821259!GO:0005769;early endosome;0.00139740978628628!GO:0030132;clathrin coat of coated pit;0.00146553937462206!GO:0048518;positive regulation of biological process;0.00146553937462206!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00146677261098713!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00146677261098713!GO:0019843;rRNA binding;0.00151192514577382!GO:0051087;chaperone binding;0.00153087148254199!GO:0007006;mitochondrial membrane organization and biogenesis;0.00154849210220798!GO:0046474;glycerophospholipid biosynthetic process;0.00155671513497605!GO:0016197;endosome transport;0.00161797338379196!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00162830887633986!GO:0043284;biopolymer biosynthetic process;0.00168339417429916!GO:0009112;nucleobase metabolic process;0.00171624386479432!GO:0046483;heterocycle metabolic process;0.00172450836897849!GO:0030521;androgen receptor signaling pathway;0.00193672724832501!GO:0019899;enzyme binding;0.00197572795797737!GO:0003678;DNA helicase activity;0.00203015508838484!GO:0007010;cytoskeleton organization and biogenesis;0.00205787212494536!GO:0048487;beta-tubulin binding;0.00213865802726138!GO:0051920;peroxiredoxin activity;0.00219840143681936!GO:0007093;mitotic cell cycle checkpoint;0.00227082175745063!GO:0030663;COPI coated vesicle membrane;0.00237394297546442!GO:0030126;COPI vesicle coat;0.00237394297546442!GO:0035258;steroid hormone receptor binding;0.00244071522783282!GO:0008168;methyltransferase activity;0.00253074590819772!GO:0004674;protein serine/threonine kinase activity;0.00253633670462171!GO:0006611;protein export from nucleus;0.00257505436819432!GO:0003711;transcription elongation regulator activity;0.00262107981188972!GO:0007052;mitotic spindle organization and biogenesis;0.0026246807770912!GO:0031968;organelle outer membrane;0.00264518121754268!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00267837121446022!GO:0046489;phosphoinositide biosynthetic process;0.00268776223664622!GO:0048468;cell development;0.00277688768753844!GO:0009116;nucleoside metabolic process;0.00284959790058114!GO:0018196;peptidyl-asparagine modification;0.00285197170014626!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00285197170014626!GO:0019867;outer membrane;0.00285592195987575!GO:0016741;transferase activity, transferring one-carbon groups;0.00300371911767507!GO:0032508;DNA duplex unwinding;0.0031233986482868!GO:0032392;DNA geometric change;0.0031233986482868!GO:0008408;3'-5' exonuclease activity;0.00313939238784119!GO:0006310;DNA recombination;0.00313939238784119!GO:0005874;microtubule;0.00318200813042627!GO:0046966;thyroid hormone receptor binding;0.00319906840397751!GO:0005684;U2-dependent spliceosome;0.00327621311218087!GO:0016272;prefoldin complex;0.00334181254075122!GO:0006405;RNA export from nucleus;0.00338257534681607!GO:0000323;lytic vacuole;0.00338257534681607!GO:0005764;lysosome;0.00338257534681607!GO:0043065;positive regulation of apoptosis;0.00339414977907886!GO:0006417;regulation of translation;0.00345227996924859!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00345227996924859!GO:0004532;exoribonuclease activity;0.00352498479074371!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00352498479074371!GO:0008139;nuclear localization sequence binding;0.00362363690101771!GO:0006595;polyamine metabolic process;0.00386486569368271!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00396486587511313!GO:0048471;perinuclear region of cytoplasm;0.00396486587511313!GO:0000139;Golgi membrane;0.00397486667837077!GO:0043488;regulation of mRNA stability;0.00398951693215868!GO:0043487;regulation of RNA stability;0.00398951693215868!GO:0030137;COPI-coated vesicle;0.00407892544769967!GO:0030659;cytoplasmic vesicle membrane;0.00411728747094789!GO:0016491;oxidoreductase activity;0.00411728747094789!GO:0005791;rough endoplasmic reticulum;0.00412328156730235!GO:0048500;signal recognition particle;0.00427405300018918!GO:0043068;positive regulation of programmed cell death;0.00428446156465891!GO:0016251;general RNA polymerase II transcription factor activity;0.00446420340285141!GO:0009165;nucleotide biosynthetic process;0.00446420340285141!GO:0051540;metal cluster binding;0.00458015514710175!GO:0051536;iron-sulfur cluster binding;0.00458015514710175!GO:0005741;mitochondrial outer membrane;0.00459944142931906!GO:0040008;regulation of growth;0.00460803333034249!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00520389450582517!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00527152262387702!GO:0065009;regulation of a molecular function;0.00528119018556768!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00528119018556768!GO:0007017;microtubule-based process;0.0053819746164843!GO:0000096;sulfur amino acid metabolic process;0.00550761905485399!GO:0008022;protein C-terminus binding;0.0058553039214314!GO:0017166;vinculin binding;0.0061834738835065!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00673111677125391!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00673111677125391!GO:0050681;androgen receptor binding;0.00711015831770332!GO:0006268;DNA unwinding during replication;0.00726496378244849!GO:0045792;negative regulation of cell size;0.00726496378244849!GO:0005637;nuclear inner membrane;0.00731573600359173!GO:0004518;nuclease activity;0.00739804377844459!GO:0046983;protein dimerization activity;0.00741930549850552!GO:0016044;membrane organization and biogenesis;0.0074695612913994!GO:0006950;response to stress;0.00764338002511798!GO:0030176;integral to endoplasmic reticulum membrane;0.0076717173412441!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0076717173412441!GO:0042770;DNA damage response, signal transduction;0.0077697881062771!GO:0030308;negative regulation of cell growth;0.00784884848770138!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00799231269535078!GO:0007050;cell cycle arrest;0.00838647959581982!GO:0008312;7S RNA binding;0.00874780053377869!GO:0009967;positive regulation of signal transduction;0.00910682779374831!GO:0003725;double-stranded RNA binding;0.00915302039732!GO:0008234;cysteine-type peptidase activity;0.00942608486746!GO:0044433;cytoplasmic vesicle part;0.00995163843920546!GO:0030134;ER to Golgi transport vesicle;0.00996413910029473!GO:0019783;small conjugating protein-specific protease activity;0.00996413910029473!GO:0008637;apoptotic mitochondrial changes;0.0101213519668709!GO:0006289;nucleotide-excision repair;0.0101415570709331!GO:0015980;energy derivation by oxidation of organic compounds;0.0102616293835147!GO:0043022;ribosome binding;0.0105934530310103!GO:0000082;G1/S transition of mitotic cell cycle;0.0106760925350004!GO:0005832;chaperonin-containing T-complex;0.0107073935082537!GO:0043492;ATPase activity, coupled to movement of substances;0.0107211224506032!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0107211224506032!GO:0045047;protein targeting to ER;0.0107211224506032!GO:0045892;negative regulation of transcription, DNA-dependent;0.0110606869614508!GO:0030518;steroid hormone receptor signaling pathway;0.0112045347747948!GO:0006213;pyrimidine nucleoside metabolic process;0.0113136132319502!GO:0016584;nucleosome positioning;0.0115940998904897!GO:0006497;protein amino acid lipidation;0.0115942793693116!GO:0008180;signalosome;0.0115971530967683!GO:0031326;regulation of cellular biosynthetic process;0.0116008953846529!GO:0004843;ubiquitin-specific protease activity;0.0116566076490791!GO:0009889;regulation of biosynthetic process;0.0117382873923231!GO:0031124;mRNA 3'-end processing;0.0119365666845587!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0119496488161829!GO:0006144;purine base metabolic process;0.012237914455872!GO:0006091;generation of precursor metabolites and energy;0.012237914455872!GO:0030133;transport vesicle;0.0123268290179587!GO:0030658;transport vesicle membrane;0.0126411585662136!GO:0000123;histone acetyltransferase complex;0.0127602150491967!GO:0000175;3'-5'-exoribonuclease activity;0.0131662838774625!GO:0005669;transcription factor TFIID complex;0.0134826016093436!GO:0006984;ER-nuclear signaling pathway;0.0136058332730509!GO:0006740;NADPH regeneration;0.0138024349565524!GO:0006098;pentose-phosphate shunt;0.0138024349565524!GO:0015631;tubulin binding;0.0139478057121731!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0143199882894597!GO:0030032;lamellipodium biogenesis;0.0145596173426558!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0149437357216354!GO:0006520;amino acid metabolic process;0.0150487014104634!GO:0046467;membrane lipid biosynthetic process;0.0150487014104634!GO:0043130;ubiquitin binding;0.0151683940648951!GO:0032182;small conjugating protein binding;0.0151683940648951!GO:0016790;thiolester hydrolase activity;0.0151683940648951!GO:0030118;clathrin coat;0.0153719577570831!GO:0005869;dynactin complex;0.0154136951839929!GO:0006650;glycerophospholipid metabolic process;0.0154895703620918!GO:0008538;proteasome activator activity;0.0155015294985748!GO:0005862;muscle thin filament tropomyosin;0.0158750291510621!GO:0012506;vesicle membrane;0.0163389053200202!GO:0031529;ruffle organization and biogenesis;0.0163389053200202!GO:0045926;negative regulation of growth;0.0164453753194499!GO:0000178;exosome (RNase complex);0.016636285056286!GO:0006284;base-excision repair;0.0166945751565109!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0170205966657633!GO:0004221;ubiquitin thiolesterase activity;0.0172950572436996!GO:0046822;regulation of nucleocytoplasmic transport;0.0173811903334058!GO:0043596;nuclear replication fork;0.0174791775347727!GO:0051287;NAD binding;0.0176556963946626!GO:0051101;regulation of DNA binding;0.0181758709544199!GO:0005876;spindle microtubule;0.0181758709544199!GO:0008652;amino acid biosynthetic process;0.0184013906308283!GO:0031901;early endosome membrane;0.0192302118262091!GO:0030127;COPII vesicle coat;0.019279487468045!GO:0012507;ER to Golgi transport vesicle membrane;0.019279487468045!GO:0006376;mRNA splice site selection;0.0194987303232733!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0194987303232733!GO:0006338;chromatin remodeling;0.0195580578618084!GO:0030031;cell projection biogenesis;0.019633650543488!GO:0030036;actin cytoskeleton organization and biogenesis;0.0203538002466171!GO:0008320;protein transmembrane transporter activity;0.0203804781333722!GO:0031625;ubiquitin protein ligase binding;0.0207913141542336!GO:0022884;macromolecule transmembrane transporter activity;0.0214138277923242!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0214138277923242!GO:0001836;release of cytochrome c from mitochondria;0.0214711183337307!GO:0015992;proton transport;0.0215804691801871!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0217701293634017!GO:0043624;cellular protein complex disassembly;0.0217868481306528!GO:0031570;DNA integrity checkpoint;0.0218867652295118!GO:0000339;RNA cap binding;0.0221463585457115!GO:0009893;positive regulation of metabolic process;0.0221646242299408!GO:0051539;4 iron, 4 sulfur cluster binding;0.0225271960260868!GO:0043189;H4/H2A histone acetyltransferase complex;0.0227967888911215!GO:0030384;phosphoinositide metabolic process;0.0228914487083047!GO:0030660;Golgi-associated vesicle membrane;0.023287634687705!GO:0007021;tubulin folding;0.0233235455921812!GO:0006354;RNA elongation;0.0233437351474737!GO:0006818;hydrogen transport;0.0235280865274261!GO:0051098;regulation of binding;0.0235280865274261!GO:0033673;negative regulation of kinase activity;0.0235280865274261!GO:0006469;negative regulation of protein kinase activity;0.0235280865274261!GO:0032200;telomere organization and biogenesis;0.0238952015759754!GO:0000723;telomere maintenance;0.0238952015759754!GO:0000228;nuclear chromosome;0.0239156178656599!GO:0042158;lipoprotein biosynthetic process;0.0240498203060098!GO:0047485;protein N-terminus binding;0.0242743218377786!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0246242570207333!GO:0015002;heme-copper terminal oxidase activity;0.0246242570207333!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0246242570207333!GO:0004129;cytochrome-c oxidase activity;0.0246242570207333!GO:0051059;NF-kappaB binding;0.0246242570207333!GO:0006506;GPI anchor biosynthetic process;0.0249349301529359!GO:0000209;protein polyubiquitination;0.0253787152244328!GO:0007040;lysosome organization and biogenesis;0.0256068166402989!GO:0030125;clathrin vesicle coat;0.0262502712778286!GO:0030665;clathrin coated vesicle membrane;0.0262502712778286!GO:0006541;glutamine metabolic process;0.0268986039480795!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0271304550397918!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0271304550397918!GO:0045045;secretory pathway;0.0271357205151524!GO:0032984;macromolecular complex disassembly;0.0272450224580172!GO:0030503;regulation of cell redox homeostasis;0.0272450224580172!GO:0006378;mRNA polyadenylation;0.0272450224580172!GO:0035267;NuA4 histone acetyltransferase complex;0.027321982842373!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0277642062261212!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0283772429900883!GO:0006275;regulation of DNA replication;0.0289349215618908!GO:0006509;membrane protein ectodomain proteolysis;0.0289349215618908!GO:0033619;membrane protein proteolysis;0.0289349215618908!GO:0046982;protein heterodimerization activity;0.0298618314405055!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0304726290584074!GO:0007033;vacuole organization and biogenesis;0.0307525484127561!GO:0051348;negative regulation of transferase activity;0.030875494467666!GO:0009303;rRNA transcription;0.0319158821913455!GO:0007346;regulation of progression through mitotic cell cycle;0.0331809079737574!GO:0006367;transcription initiation from RNA polymerase II promoter;0.033464673689964!GO:0005784;translocon complex;0.033803752703639!GO:0008287;protein serine/threonine phosphatase complex;0.0340112366539068!GO:0004003;ATP-dependent DNA helicase activity;0.0343259096236001!GO:0006360;transcription from RNA polymerase I promoter;0.0343259096236001!GO:0046979;TAP2 binding;0.0343259096236001!GO:0046977;TAP binding;0.0343259096236001!GO:0046978;TAP1 binding;0.0343259096236001!GO:0000097;sulfur amino acid biosynthetic process;0.0345298287848819!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0353715830938788!GO:0042393;histone binding;0.0353715830938788!GO:0009119;ribonucleoside metabolic process;0.0354668184779095!GO:0000781;chromosome, telomeric region;0.0355327356857714!GO:0031902;late endosome membrane;0.0356989522232483!GO:0006505;GPI anchor metabolic process;0.035841720303631!GO:0007030;Golgi organization and biogenesis;0.0366671539835846!GO:0030833;regulation of actin filament polymerization;0.0367813623329169!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0367813623329169!GO:0010257;NADH dehydrogenase complex assembly;0.0367813623329169!GO:0033108;mitochondrial respiratory chain complex assembly;0.0367813623329169!GO:0022415;viral reproductive process;0.0377480721243995!GO:0043241;protein complex disassembly;0.0379708259501292!GO:0000922;spindle pole;0.0382665734384136!GO:0009451;RNA modification;0.0401159226573606!GO:0016407;acetyltransferase activity;0.040324656020824!GO:0030522;intracellular receptor-mediated signaling pathway;0.040324656020824!GO:0030508;thiol-disulfide exchange intermediate activity;0.040324656020824!GO:0030100;regulation of endocytosis;0.0407155275782127!GO:0030911;TPR domain binding;0.0409077246397134!GO:0031123;RNA 3'-end processing;0.0412885752195083!GO:0031371;ubiquitin conjugating enzyme complex;0.041552636165531!GO:0005758;mitochondrial intermembrane space;0.0416206280301107!GO:0000738;DNA catabolic process, exonucleolytic;0.0421280541749091!GO:0022411;cellular component disassembly;0.0425586741383248!GO:0050811;GABA receptor binding;0.0429053436038394!GO:0006917;induction of apoptosis;0.0434843266463267!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0435904896770088!GO:0008537;proteasome activator complex;0.0442535882213186!GO:0006270;DNA replication initiation;0.044710997666721!GO:0030496;midbody;0.0448214691658933!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0451890241625374!GO:0004680;casein kinase activity;0.0472446293509172!GO:0017134;fibroblast growth factor binding;0.0473438532022723!GO:0030433;ER-associated protein catabolic process;0.0478122118480959!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0478122118480959!GO:0000792;heterochromatin;0.0486208337457573!GO:0006564;L-serine biosynthetic process;0.0487426000439446!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0487579405288438!GO:0003923;GPI-anchor transamidase activity;0.0487679379293469!GO:0016255;attachment of GPI anchor to protein;0.0487679379293469!GO:0042765;GPI-anchor transamidase complex;0.0487679379293469!GO:0032507;maintenance of cellular protein localization;0.0491116304048578!GO:0006596;polyamine biosynthetic process;0.0497786690128483
|sample_id=10853
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=mesothelium
|top_motifs=IRF7:1.84275316775;STAT1,3:1.78315756763;AIRE:1.5227446165;IRF1,2:1.48760517933;EVI1:1.46977599726;bHLH_family:1.28587927611;ZBTB16:1.24506250816;ZNF384:1.17348862186;ELK1,4_GABP{A,B1}:1.13025498723;RXR{A,B,G}:1.11299180473;UFEwm:1.0485767311;ZNF148:1.02793322544;POU1F1:0.861716237235;ONECUT1,2:0.784014854717;CDX1,2,4:0.783874056939;NKX3-1:0.762936231481;FOXQ1:0.725420901058;TFDP1:0.711528349722;ZNF143:0.668667053369;EN1,2:0.655166709824;MYB:0.654540454981;NR6A1:0.626991112353;TEF:0.610253255951;TEAD1:0.607305590726;HMGA1,2:0.589241128231;E2F1..5:0.564862264044;PITX1..3:0.537794294301;NFE2L1:0.536606937918;CEBPA,B_DDIT3:0.471129877755;GLI1..3:0.466963866367;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.464093942966;HOX{A4,D4}:0.4422524091;NFY{A,B,C}:0.432214212112;LMO2:0.388479105948;PDX1:0.388343378601;PAX6:0.38500609983;HSF1,2:0.378144657293;HIF1A:0.377544485491;FOXL1:0.362936322415;GFI1B:0.337015067283;TOPORS:0.32463737129;YY1:0.316749490666;GFI1:0.305321259163;NKX6-1,2:0.290758972429;ADNP_IRX_SIX_ZHX:0.272950241974;PAX8:0.24403098285;POU2F1..3:0.232588074385;POU5F1:0.231062324508;HOX{A5,B5}:0.227183626753;CDC5L:0.213906728771;PAX4:0.162001128893;TFAP2B:0.156491779678;RBPJ:0.155868038603;STAT5{A,B}:0.152903186723;FOXD3:0.141367870278;HOXA9_MEIS1:0.134618178856;ZIC1..3:0.123498651359;NFIX:0.113039813652;ATF4:0.0883526781753;ALX1:0.0648569346016;AHR_ARNT_ARNT2:0.0599480359785;FOXM1:0.0506336163664;HOX{A6,A7,B6,B7}:0.046105540773;PBX1:0.0456635992751;NRF1:0.0452735659344;STAT2,4,6:0.0279754237468;TLX1..3_NFIC{dimer}:0.0198671833818;BACH2:0.0175436149495;PRRX1,2:0.0118501422084;CUX2:-0.00701833506741;NKX2-2,8:-0.0127831032781;GZF1:-0.0170139052583;GATA4:-0.0205876951815;HNF4A_NR2F1,2:-0.0244896073233;NKX3-2:-0.0274617782061;PAX1,9:-0.0302032949257;SOX17:-0.0483972644153;ALX4:-0.0485303664151;FOXP1:-0.0559685150243;PAX3,7:-0.0745806799558;KLF4:-0.0914472211389;IKZF2:-0.105355578406;MYOD1:-0.111099814273;ZBTB6:-0.125239121434;FOS_FOS{B,L1}_JUN{B,D}:-0.129475307849;ARID5B:-0.13761669389;BREu{core}:-0.142219036194;ELF1,2,4:-0.145953077464;RREB1:-0.164258892285;HLF:-0.170862873676;NFKB1_REL_RELA:-0.17148831122;GTF2A1,2:-0.175166760843;LHX3,4:-0.181292431945;XCPE1{core}:-0.195490418579;NFE2:-0.195577451205;MTE{core}:-0.197415803139;OCT4_SOX2{dimer}:-0.202973704557;PPARG:-0.21395743957;TP53:-0.234800341405;HES1:-0.240796688512;TBP:-0.247922706058;MZF1:-0.248608036495;SNAI1..3:-0.255783385641;TFAP2{A,C}:-0.262326710286;ESR1:-0.270989909872;EGR1..3:-0.287358102136;CREB1:-0.294456363867;SRF:-0.298178020414;NR3C1:-0.301214371746;ZEB1:-0.30222315029;REST:-0.310270625655;RFX1:-0.316712445558;FOXO1,3,4:-0.325989800527;DMAP1_NCOR{1,2}_SMARC:-0.338460763073;HNF1A:-0.339233102065;FOXP3:-0.345360309291;EP300:-0.347917589401;MAZ:-0.378870463207;IKZF1:-0.382942648448;NANOG:-0.386099240985;POU6F1:-0.392457289853;GTF2I:-0.399074692369;FOSL2:-0.40034885645;ATF5_CREB3:-0.424744206438;MYBL2:-0.441116333715;PAX5:-0.44941774111;NFE2L2:-0.450720729849;NKX2-3_NKX2-5:-0.450991628853;SP1:-0.451311405576;HBP1_HMGB_SSRP1_UBTF:-0.472218392365;TBX4,5:-0.476499250043;VSX1,2:-0.492022533842;ZFP161:-0.49392034872;HIC1:-0.506438529205;MTF1:-0.516498325683;ATF2:-0.523998892147;MED-1{core}:-0.529180766773;NR5A1,2:-0.532861004454;SOX{8,9,10}:-0.536477779604;AR:-0.536575584662;TFCP2:-0.550940997757;HMX1:-0.569588872196;SPI1:-0.569753990742;NFATC1..3:-0.575472988562;RUNX1..3:-0.57822746923;PATZ1:-0.587823876341;GATA6:-0.597855412746;FOX{I1,J2}:-0.621852595534;NKX2-1,4:-0.631832875006;PAX2:-0.634896009353;TAL1_TCF{3,4,12}:-0.641695718695;PRDM1:-0.642799803823;ETS1,2:-0.659509058035;FOX{D1,D2}:-0.666149951711;FOXA2:-0.675124406357;SPIB:-0.67708752194;BPTF:-0.683655587723;MAFB:-0.684682008906;SOX2:-0.69270695341;CRX:-0.719801866228;FOXN1:-0.746015685561;GCM1,2:-0.754197887717;RXRA_VDR{dimer}:-0.785393553907;MYFfamily:-0.786069668325;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.791827660793;TLX2:-0.80440058266;T:-0.820054099589;DBP:-0.836306615291;MEF2{A,B,C,D}:-0.845060610477;HAND1,2:-0.845661600141;POU3F1..4:-0.855152729926;TFAP4:-0.876141955131;NFIL3:-0.891012522084;SREBF1,2:-0.919784042096;NR1H4:-0.922226921614;EBF1:-0.937462564925;FOX{F1,F2,J1}:-0.959547363846;XBP1:-0.978233010993;SOX5:-1.0069955333;ZNF423:-1.02962619188;JUN:-1.03708158126;NHLH1,2:-1.03863940826;ESRRA:-1.04259877414;NANOG{mouse}:-1.08752188303;ZNF238:-1.12109367057;LEF1_TCF7_TCF7L1,2:-1.12226429421;SPZ1:-1.26344033785;ATF6:-1.29170984653;TGIF1:-1.34969627563;RFX2..5_RFXANK_RFXAP:-1.39653683881;SMAD1..7,9:-1.40548928779;RORA:-1.54354071946
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10853-111F7;search_select_hide=table117:FF:10853-111F7
}}
}}

Latest revision as of 15:10, 3 June 2020

Name:mesothelioma cell line:Mero-82
Species:Human (Homo sapiens)
Library ID:CNhs13069
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuemesothelium
dev stageNA
sexmale
ageunknown
cell typemesothelial cell
cell lineMero-82
companyECACC
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005138
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13069 CAGE DRX007942 DRR008814
Accession ID Hg19

Library idBAMCTSS
CNhs13069 DRZ000239 DRZ001624
Accession ID Hg38

Library idBAMCTSS
CNhs13069 DRZ011589 DRZ012974
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.315
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.331
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0951
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0578
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.262
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0951
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0673
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0393
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0951
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.368
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma1.122
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.344
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.347
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.25
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.392
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0951
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.239
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13069

Jaspar motifP-value
MA0002.20.00356
MA0003.10.145
MA0004.10.23
MA0006.10.795
MA0007.10.242
MA0009.10.277
MA0014.10.542
MA0017.10.393
MA0018.20.13
MA0019.10.218
MA0024.10.0297
MA0025.10.745
MA0027.10.989
MA0028.13.44168e-7
MA0029.10.333
MA0030.10.207
MA0031.10.996
MA0035.20.387
MA0038.10.35
MA0039.20.597
MA0040.10.115
MA0041.10.3
MA0042.10.227
MA0043.10.198
MA0046.10.0994
MA0047.20.0425
MA0048.16.41999e-4
MA0050.12.62327e-18
MA0051.14.57081e-16
MA0052.15.51366e-4
MA0055.18.09558e-4
MA0057.10.699
MA0058.10.329
MA0059.10.00578
MA0060.12.29672e-12
MA0061.10.587
MA0062.22.26742e-5
MA0065.20.257
MA0066.10.614
MA0067.10.0638
MA0068.10.0453
MA0069.10.828
MA0070.10.11
MA0071.10.523
MA0072.10.622
MA0073.10.491
MA0074.10.421
MA0076.11.12357e-6
MA0077.10.675
MA0078.10.64
MA0079.20.385
MA0080.24.15633e-9
MA0081.10.0708
MA0083.10.924
MA0084.10.3
MA0087.10.0512
MA0088.10.0117
MA0090.10.0876
MA0091.10.166
MA0092.10.154
MA0093.10.209
MA0099.20.00517
MA0100.10.715
MA0101.10.648
MA0102.20.0324
MA0103.10.313
MA0104.20.0801
MA0105.10.617
MA0106.10.865
MA0107.10.765
MA0108.20.225
MA0111.10.981
MA0112.20.707
MA0113.10.256
MA0114.10.783
MA0115.10.0497
MA0116.10.877
MA0117.10.369
MA0119.10.859
MA0122.10.264
MA0124.10.707
MA0125.10.789
MA0131.10.215
MA0135.10.00692
MA0136.18.04602e-5
MA0137.20.16
MA0138.20.0915
MA0139.10.677
MA0140.10.0373
MA0141.10.408
MA0142.10.144
MA0143.10.319
MA0144.10.269
MA0145.10.251
MA0146.10.042
MA0147.10.0282
MA0148.10.16
MA0149.10.114
MA0150.10.0212
MA0152.10.732
MA0153.10.0785
MA0154.10.0423
MA0155.10.387
MA0156.10.653
MA0157.10.166
MA0159.10.728
MA0160.10.281
MA0162.10.463
MA0163.10.133
MA0164.10.0777
MA0258.10.48
MA0259.10.118



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13069

Novel motifP-value
10.445
100.161
1000.0817
1010.651
1020.322
1030.646
1040.677
1050.0323
1060.557
1070.903
1080.957
1090.209
110.789
1100.223
1110.321
1120.0421
1130.0459
1140.834
1150.614
1160.582
1170.0421
1180.155
1190.726
120.0782
1200.344
1210.894
1220.961
1230.472
1240.63
1250.906
1260.558
1270.871
1280.114
1290.915
130.0217
1300.72
1310.567
1320.656
1330.5
1340.174
1350.0311
1360.045
1370.241
1380.214
1390.108
140.2
1400.849
1410.59
1420.369
1430.943
1440.8
1450.668
1460.384
1470.403
1480.462
1490.123
150.646
1500.0968
1510.395
1520.0188
1530.907
1540.371
1550.87
1560.81
1570.28
1580.396
1590.746
160.868
1600.834
1610.686
1620.247
1630.391
1640.892
1650.43
1660.191
1670.069
1680.603
1690.408
170.931
180.288
190.218
20.148
200.177
210.0651
220.763
230.0203
240.75
250.577
260.609
270.743
280.7
290.044
30.509
300.628
310.383
320.978
330.589
340.113
350.813
360.511
370.0582
380.955
390.992
40.11
400.552
410.0331
420.734
430.735
440.377
450.283
460.997
470.577
480.55
490.99
50.123
500.331
510.784
520.262
530.282
540.955
550.886
560.949
570.846
580.536
590.448
60.42
600.309
610.0292
620.403
630.947
640.981
650.609
663.20764e-9
670.886
680.774
690.346
70.427
700.561
710.242
720.866
730.0293
740.228
750.00811
760.101
770.189
780.576
790.977
80.861
800.0283
810.615
820.223
830.642
840.328
850.214
860.86
870.0818
880.852
890.193
90.165
900.2
910.171
920.143
930.336
940.618
950.04
960.317
970.705
980.413
990.327



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13069


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0102424 (mesothelioma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)

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