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{{f5samples
{{f5samples
|id=FF:11494-119E9
|DRA_sample_Accession=CAGE@SAMD00005481
|name=Neurons, donor1
|accession_numbers=CAGE;DRX008375;DRR009247;DRZ000672;DRZ002057;DRZ012022;DRZ013407
|sample_id=11494
|ancestors_in_anatomy_facet=
|rna_tube_id=119E9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000540,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000393,CL:0000211,CL:0000404,CL:0000255
|rna_box=119
|rna_position=E9
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=
|rna_catalog_number=SC1525
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=brain
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=neuron
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs12338,LSID913,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000031,CL:0000034,CL:0000047,CL:0000048,CL:0000055,CL:0000133,CL:0000144,CL:0000211,CL:0000220,CL:0000221,CL:0000255,CL:0000393,CL:0000404,CL:0000540,CL:0000548,CL:0000723,CL:0002319,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000073,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0001016,UBERON:0001017,UBERON:0001062,UBERON:0002050,UBERON:0002532,UBERON:0004121,UBERON:0005423,UBERON:0005743
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000348
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr17:37764128..37764258,-!p1@NEUROD2!2.58!375.82!NEUROD2;;chr14:29235961..29236008,+!p1@FOXG1!2.44!272.20!FOXG1;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.41!257.51!POU3F3;;chr2:5832508..5832524,+!p1@SOX11!2.39!243.59!SOX11;;chr7:31380292..31380351,-!p1@NEUROD6!2.35!222.71!NEUROD6;;chr3:181429704..181429722,+!p1@SOX2!2.08!119.09!SOX2;;chr14:29236269..29236285,+!p3@FOXG1!2.06!113.67!FOXG1;;chr4:81118647..81118666,+!p1@PRDM8!2.04!143.06!PRDM8;;chr1:244214577..244214593,+!p1@ZNF238!2.03!105.94!ZNF238;;chrX:25034067..25034088,-!p1@ARX!2.03!105.17!ARX;;chr2:5832493..5832507,+!p2@SOX11!2.01!101.30!SOX11;;chr1:151032922..151032951,+!p2@MLLT11!1.98!153.88!MLLT11;;chr20:20348740..20348757,+!p1@INSM1!1.98!95.11!INSM1;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.96!91.25!POU3F3;;chr14:29234581..29234601,+!p2@FOXG1!1.76!56.45!FOXG1;;chr2:16080659..16080685,+!p1@MYCN!1.74!54.13!MYCN;;chr1:151032860..151032918,+!p1@MLLT11!1.70!555.99!MLLT11;;chr8:65492756..65492768,+!p2@BHLHE22!1.70!49.49!BHLHE22;;chr4:113437332..113437337,-!p1@NEUROG2!1.66!44.85!NEUROG2;;chr2:162272785..162272836,+!p1@TBR1!1.63!41.76!TBR1;;chr6:19837592..19837621,+!p1@ID4!1.62!238.17!ID4;;chr2:239148671..239148686,-!p1@HES6!1.61!140.74!HES6;;chr19:13134772..13134822,+!p2@NFIX!1.60!55.68!NFIX;;chr4:57547454..57547469,-!p1@HOPX!1.59!37.89!HOPX;;chr12:103351444..103351461,+!p1@ASCL1!1.58!37.12!ASCL1;;chr9:126773880..126773895,+!p2@LHX2!1.58!37.12!LHX2;;chr7:100065686..100065701,-!p2@TSC22D4!1.56!35.57!TSC22D4;;chr3:181429741..181429767,+!p2@SOX2!1.54!34.02!SOX2;;chr3:27764190..27764208,-!p2@EOMES!1.54!34.02!EOMES;;chr14:29237009..29237049,+!p4@FOXG1!1.54!34.02!FOXG1;;chr16:51185172..51185197,-!p1@SALL1!1.53!33.25!SALL1;;chr19:38720294..38720348,-!p1@DPF1!1.52!39.44!DPF1;;chr6:21594252..21594285,+!p11@SOX4!1.52!35.57!SOX4;;chr12:111471526..111471541,+!p1@CUX2!1.52!32.48!CUX2;;chr9:126774018..126774055,+!p1@LHX2!1.52!32.48!LHX2;;chr2:60780607..60780624,-!p2@BCL11A!1.51!94.34!BCL11A;;chr2:172967621..172967637,-!p1@DLX2!1.49!78.10!DLX2;;chr6:21594206..21594221,+!p15@SOX4!1.48!29.38!SOX4;;chr14:29236301..29236317,+!p5@FOXG1!1.44!26.29!FOXG1;;chr9:20621927..20621996,-!p3@MLLT3!1.42!41.76!MLLT3;;chr2:200322229..200322251,-!p3@SATB2!1.42!25.52!SATB2;;chr2:182545234..182545252,-!p1@NEUROD1!1.41!24.75!NEUROD1;;chr19:47523058..47523114,+!p1@NPAS1!1.41!24.75!NPAS1;;chr7:96654133..96654150,-!p1@DLX5!1.41!24.75!DLX5;;chr8:80679993..80680011,-!p1@HEY1!1.39!34.02!HEY1;;chr5:92919100..92919135,+!p3@NR2F1!1.37!27.07!NR2F1;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!1.36!21.65!POU3F3;;chr2:162272889..162272915,+!p2@TBR1!1.36!21.65!TBR1;;chrX:84498989..84499003,+!p1@ZNF711!1.35!29.38!ZNF711;;chr20:55204351..55204377,+!p1@TFAP2C!1.32!25.52!TFAP2C;;chr1:50889103..50889145,-!p1@DMRTA2!1.32!20.11!DMRTA2;;chr2:2334997..2335053,-!p1@MYT1L!1.32!20.11!MYT1L;;chr6:99282475..99282501,+!p1@POU3F2!1.32!20.11!POU3F2;;chr14:29236169..29236216,+!p6@FOXG1!1.32!20.11!FOXG1;;chr11:63684602..63684664,-!p1@RCOR2!1.30!37.12!RCOR2;;chr2:200322723..200322739,-!p6@SATB2!1.29!18.56!SATB2;;chr15:37392094..37392116,-!p6@MEIS2!1.27!21.65!MEIS2;;chr2:63277948..63277974,+!p1@OTX1!1.27!17.79!OTX1;;chr6:99282438..99282457,+!p2@POU3F2!1.27!17.79!POU3F2;;chrX:82763292..82763317,+!p1@POU3F4!1.27!17.79!POU3F4;;chr1:41827095..41827155,+!p1@FOXO6!1.26!23.20!FOXO6;;chr12:24102576..24102623,-!p2@SOX5!1.26!17.01!SOX5;;chr8:65492915..65492932,+!p1@BHLHE22!1.26!17.01!BHLHE22;;chr6:21593973..21593988,+!p1@SOX4!1.24!579.97!SOX4;;chr1:2461692..2461710,-!p1@HES5!1.24!16.24!HES5;;chr11:31832862..31832884,-!p2@PAX6!1.24!16.24!PAX6;;chr2:175199675..175199688,+!p1@SP9!1.22!15.47!SP9;;chr2:200322654..200322707,-!p2@SATB2!1.20!21.65!SATB2;;chr2:172949484..172949522,+!p1@DLX1!1.20!14.69!DLX1;;chr5:124081979..124082021,-!p7@ZNF608!1.20!14.69!ZNF608;;chrY:21906594..21906622,-!p1@KDM5D!1.20!14.69!KDM5D;;chr1:151032957..151032968,+!p7@MLLT11!1.20!14.69!MLLT11;;chr5:92918919..92918942,+!p1@NR2F1!1.19!64.18!NR2F1;;chr13:72441315..72441454,-!p1@DACH1!1.17!27.84!DACH1;;chr2:162272716..162272753,+!p3@TBR1!1.17!13.92!TBR1;;chr6:99282592..99282616,+!p3@POU3F2!1.17!13.92!POU3F2;;chr9:14314131..14314147,-!p2@NFIB!1.15!73.46!NFIB;;chr2:60780753..60780800,-!p1@BCL11A!1.15!64.18!BCL11A;;chrX:84499081..84499115,+!p2@ZNF711!1.15!19.33!ZNF711;;chr11:31832807..31832823,-!p4@PAX6!1.15!13.15!PAX6;;chr19:13135582..13135600,+!p3@NFIX!1.15!13.15!NFIX;;chr15:37392724..37392757,-!p1@MEIS2!1.13!57.22!MEIS2;;chr14:73360799..73360817,-!p1@DPF3!1.13!43.30!DPF3;;chr9:126774058..126774081,+!p3@LHX2!1.13!12.37!LHX2;;chr19:58545454..58545498,+!p1@ZSCAN1!1.13!12.37!ZSCAN1;;chr1:244214611..244214624,+!p4@ZNF238!1.13!12.37!ZNF238;;chr2:105470599..105470610,+!p@chr2:105470599..105470610,+!1.13!12.37!POU3F3;;chr2:172950227..172950249,+!p2@DLX1!1.13!12.37!DLX1;;chr7:31380440..31380451,-!p4@NEUROD6!1.13!12.37!NEUROD6;;chr15:57511609..57511651,+!p2@TCF12!1.11!20.11!TCF12;;chr5:92918956..929189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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000540;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002319;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016
|ffid_belonging_in_development=CL:0000133,CL:0000031,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|rna_box=119
|rna_catalog_number=SC1525
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=E9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.19E+11
|rna_weight_ug=10
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=neuron
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.33585554745247e-251!GO:0043226;organelle;8.91054163071472e-214!GO:0043229;intracellular organelle;4.4024307833584e-213!GO:0043231;intracellular membrane-bound organelle;1.87439531350622e-209!GO:0043227;membrane-bound organelle;1.87439531350622e-209!GO:0005737;cytoplasm;6.72251678570534e-146!GO:0044422;organelle part;1.26754576816915e-130!GO:0044446;intracellular organelle part;3.55334554400357e-129!GO:0005634;nucleus;2.60853946729687e-108!GO:0032991;macromolecular complex;8.69951264640502e-105!GO:0044444;cytoplasmic part;2.78730772930317e-98!GO:0030529;ribonucleoprotein complex;8.00092025742309e-91!GO:0044237;cellular metabolic process;2.29178713594569e-83!GO:0043170;macromolecule metabolic process;2.35634626771209e-83!GO:0044238;primary metabolic process;1.84163893997941e-82!GO:0003723;RNA binding;1.01660684464247e-78!GO:0005515;protein binding;4.40163760842828e-74!GO:0044428;nuclear part;7.38476277892682e-74!GO:0043233;organelle lumen;9.83258658094904e-65!GO:0031974;membrane-enclosed lumen;9.83258658094904e-65!GO:0016043;cellular component organization and biogenesis;6.1663596222789e-63!GO:0043283;biopolymer metabolic process;1.60704610368741e-62!GO:0010467;gene expression;3.10925727059013e-62!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.50926985632236e-57!GO:0006396;RNA processing;1.31321364319216e-54!GO:0043234;protein complex;5.45801275084354e-52!GO:0005739;mitochondrion;6.52051529874301e-52!GO:0005840;ribosome;3.61129905374763e-50!GO:0031981;nuclear lumen;1.69838030463911e-44!GO:0016071;mRNA metabolic process;5.3761969989602e-44!GO:0003735;structural constituent of ribosome;7.30235904288134e-44!GO:0008380;RNA splicing;6.82569332564314e-43!GO:0003676;nucleic acid binding;1.60831586137996e-42!GO:0006412;translation;1.29350164616082e-40!GO:0006996;organelle organization and biogenesis;2.01925826451371e-40!GO:0006397;mRNA processing;7.58193146683915e-40!GO:0033036;macromolecule localization;1.08440327286445e-39!GO:0031090;organelle membrane;4.32619392880873e-39!GO:0015031;protein transport;1.1317559241263e-38!GO:0033279;ribosomal subunit;1.3521658504754e-38!GO:0043228;non-membrane-bound organelle;2.84302405634427e-36!GO:0043232;intracellular non-membrane-bound organelle;2.84302405634427e-36!GO:0044429;mitochondrial part;8.64625940404479e-36!GO:0008104;protein localization;1.05089583750358e-35!GO:0016070;RNA metabolic process;1.77903381081152e-35!GO:0045184;establishment of protein localization;4.14867999473159e-35!GO:0031967;organelle envelope;7.51559770178918e-34!GO:0031975;envelope;9.71695956103293e-34!GO:0046907;intracellular transport;2.6460619230892e-33!GO:0019538;protein metabolic process;6.00349029170655e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.32129557536818e-31!GO:0005829;cytosol;1.88698876763776e-30!GO:0005681;spliceosome;3.55406173948724e-30!GO:0006259;DNA metabolic process;3.72194313731752e-30!GO:0065003;macromolecular complex assembly;1.01864822952228e-28!GO:0044267;cellular protein metabolic process;2.03754957159065e-28!GO:0044260;cellular macromolecule metabolic process;2.11529159657585e-28!GO:0009059;macromolecule biosynthetic process;1.61830494389738e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.88217842571823e-27!GO:0044249;cellular biosynthetic process;7.01679718173305e-27!GO:0009058;biosynthetic process;6.59856086305809e-26!GO:0005654;nucleoplasm;6.8527044196762e-26!GO:0006886;intracellular protein transport;1.39860116708809e-25!GO:0022607;cellular component assembly;1.42768336425828e-25!GO:0051649;establishment of cellular localization;1.70587414186078e-25!GO:0051641;cellular localization;9.32842666359298e-25!GO:0005740;mitochondrial envelope;2.94055707862785e-24!GO:0006119;oxidative phosphorylation;3.03794769573571e-24!GO:0019866;organelle inner membrane;3.36859373530621e-23!GO:0031966;mitochondrial membrane;5.76987413845891e-23!GO:0044451;nucleoplasm part;3.90530586515628e-22!GO:0044445;cytosolic part;1.75323684836196e-21!GO:0005743;mitochondrial inner membrane;3.08261680390806e-21!GO:0044455;mitochondrial membrane part;3.07876979731245e-20!GO:0016462;pyrophosphatase activity;3.13703975154523e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.77743998762652e-20!GO:0017111;nucleoside-triphosphatase activity;3.83913409522521e-20!GO:0015935;small ribosomal subunit;4.04139145211454e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;5.22419408659881e-20!GO:0015934;large ribosomal subunit;1.93921082667196e-19!GO:0000166;nucleotide binding;1.14820021086458e-18!GO:0005730;nucleolus;5.12922535082161e-18!GO:0005746;mitochondrial respiratory chain;5.12922535082161e-18!GO:0007049;cell cycle;8.4824631575985e-18!GO:0051276;chromosome organization and biogenesis;1.36844229347085e-17!GO:0022618;protein-RNA complex assembly;2.56622946389726e-17!GO:0050136;NADH dehydrogenase (quinone) activity;5.36102537113655e-17!GO:0003954;NADH dehydrogenase activity;5.36102537113655e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.36102537113655e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.598333944056e-17!GO:0006512;ubiquitin cycle;9.81805808267607e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;1.22370439827093e-16!GO:0005694;chromosome;1.22370439827093e-16!GO:0006323;DNA packaging;5.99207527489624e-16!GO:0006457;protein folding;1.66484859778986e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.62975663457676e-15!GO:0000375;RNA splicing, via transesterification reactions;4.62975663457676e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.62975663457676e-15!GO:0012505;endomembrane system;6.07185219274151e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.98725497324935e-15!GO:0030964;NADH dehydrogenase complex (quinone);1.06087708873114e-14!GO:0045271;respiratory chain complex I;1.06087708873114e-14!GO:0005747;mitochondrial respiratory chain complex I;1.06087708873114e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.0771837198944e-14!GO:0044427;chromosomal part;1.16126221414987e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.63256228628407e-14!GO:0042773;ATP synthesis coupled electron transport;1.63256228628407e-14!GO:0008134;transcription factor binding;1.70295331353566e-14!GO:0008135;translation factor activity, nucleic acid binding;1.95601153374134e-14!GO:0006974;response to DNA damage stimulus;2.44590443088874e-14!GO:0016874;ligase activity;3.48167998001246e-14!GO:0031980;mitochondrial lumen;3.48167998001246e-14!GO:0005759;mitochondrial matrix;3.48167998001246e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.55718398724055e-14!GO:0042254;ribosome biogenesis and assembly;3.95554839381017e-14!GO:0005761;mitochondrial ribosome;4.41626433566194e-14!GO:0000313;organellar ribosome;4.41626433566194e-14!GO:0005794;Golgi apparatus;4.91417512200443e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.61414005224639e-13!GO:0050794;regulation of cellular process;3.74160445673706e-13!GO:0022402;cell cycle process;4.86038441628911e-13!GO:0006605;protein targeting;8.8832291772216e-13!GO:0032553;ribonucleotide binding;1.43169135166921e-12!GO:0032555;purine ribonucleotide binding;1.43169135166921e-12!GO:0006333;chromatin assembly or disassembly;1.44059830359213e-12!GO:0016192;vesicle-mediated transport;1.58203076488043e-12!GO:0048770;pigment granule;1.58203076488043e-12!GO:0042470;melanosome;1.58203076488043e-12!GO:0065004;protein-DNA complex assembly;3.18419229166534e-12!GO:0006281;DNA repair;3.92232858617039e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.02603887275348e-12!GO:0019222;regulation of metabolic process;5.18645713246284e-12!GO:0044265;cellular macromolecule catabolic process;5.55475116681836e-12!GO:0031965;nuclear membrane;9.04601458831086e-12!GO:0015630;microtubule cytoskeleton;9.59692887640582e-12!GO:0006511;ubiquitin-dependent protein catabolic process;9.7209131185437e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.07067686971937e-11!GO:0019941;modification-dependent protein catabolic process;1.13991924523424e-11!GO:0043632;modification-dependent macromolecule catabolic process;1.13991924523424e-11!GO:0051082;unfolded protein binding;1.59067486523406e-11!GO:0044257;cellular protein catabolic process;2.51360537696946e-11!GO:0050789;regulation of biological process;2.51890902116775e-11!GO:0043285;biopolymer catabolic process;2.96294840339906e-11!GO:0048193;Golgi vesicle transport;3.41029234300033e-11!GO:0003743;translation initiation factor activity;5.01710764082084e-11!GO:0000278;mitotic cell cycle;5.13241750062632e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.10900815530975e-11!GO:0017076;purine nucleotide binding;6.33149332110807e-11!GO:0000785;chromatin;6.67730293456204e-11!GO:0016604;nuclear body;7.05645279157998e-11!GO:0051186;cofactor metabolic process;7.66017780388996e-11!GO:0044453;nuclear membrane part;7.78901180824801e-11!GO:0006260;DNA replication;1.37589323203695e-10!GO:0005635;nuclear envelope;2.02967897810957e-10!GO:0043412;biopolymer modification;2.45899748328068e-10!GO:0006413;translational initiation;2.47911942351533e-10!GO:0009057;macromolecule catabolic process;5.97980153809247e-10!GO:0006913;nucleocytoplasmic transport;6.34813517279513e-10!GO:0006350;transcription;7.0809326177362e-10!GO:0042623;ATPase activity, coupled;7.99325085318797e-10!GO:0016887;ATPase activity;8.2195995978553e-10!GO:0030163;protein catabolic process;8.51767490749671e-10!GO:0006364;rRNA processing;1.03120343136952e-09!GO:0005643;nuclear pore;1.08337115274971e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.11123246174549e-09!GO:0051169;nuclear transport;1.18427119800009e-09!GO:0006334;nucleosome assembly;1.30425680411589e-09!GO:0016607;nuclear speck;1.46640148975625e-09!GO:0016072;rRNA metabolic process;2.00848320190871e-09!GO:0008565;protein transporter activity;2.11223619984684e-09!GO:0030532;small nuclear ribonucleoprotein complex;2.87394776383805e-09!GO:0006366;transcription from RNA polymerase II promoter;3.43435483363779e-09!GO:0006446;regulation of translational initiation;3.53653581767519e-09!GO:0009719;response to endogenous stimulus;4.00716066180555e-09!GO:0031497;chromatin assembly;5.00582570530988e-09!GO:0006403;RNA localization;5.89067320434687e-09!GO:0015986;ATP synthesis coupled proton transport;5.89067320434687e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.89067320434687e-09!GO:0006464;protein modification process;5.92344988328255e-09!GO:0000087;M phase of mitotic cell cycle;5.98341613508132e-09!GO:0005524;ATP binding;6.10853238780068e-09!GO:0006732;coenzyme metabolic process;6.53927477922221e-09!GO:0007067;mitosis;7.59601114973167e-09!GO:0003924;GTPase activity;7.77705489499655e-09!GO:0003712;transcription cofactor activity;7.82225062694592e-09!GO:0031323;regulation of cellular metabolic process;7.90582684900307e-09!GO:0019829;cation-transporting ATPase activity;9.2385856975978e-09!GO:0032559;adenyl ribonucleotide binding;9.67292992324339e-09!GO:0050657;nucleic acid transport;1.13971033649071e-08!GO:0051236;establishment of RNA localization;1.13971033649071e-08!GO:0050658;RNA transport;1.13971033649071e-08!GO:0009259;ribonucleotide metabolic process;1.63850885586799e-08!GO:0043687;post-translational protein modification;1.95596997528495e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.73243772211149e-08!GO:0000074;regulation of progression through cell cycle;2.73549703715729e-08!GO:0051726;regulation of cell cycle;3.06832058042327e-08!GO:0051301;cell division;3.73417673793242e-08!GO:0009141;nucleoside triphosphate metabolic process;3.76114101124399e-08!GO:0032774;RNA biosynthetic process;3.84095062451233e-08!GO:0008639;small protein conjugating enzyme activity;4.05402553492661e-08!GO:0006163;purine nucleotide metabolic process;4.35800375251011e-08!GO:0006351;transcription, DNA-dependent;4.44826500248306e-08!GO:0009060;aerobic respiration;4.61416427623315e-08!GO:0048523;negative regulation of cellular process;4.68777760351569e-08!GO:0022403;cell cycle phase;4.80763399388514e-08!GO:0004386;helicase activity;4.89440663254809e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.00851801286796e-08!GO:0009144;purine nucleoside triphosphate metabolic process;5.00851801286796e-08!GO:0016568;chromatin modification;5.30551581037002e-08!GO:0044248;cellular catabolic process;5.47260641785158e-08!GO:0009150;purine ribonucleotide metabolic process;5.67570413798011e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.14632276858184e-08!GO:0031988;membrane-bound vesicle;6.17536886214199e-08!GO:0010468;regulation of gene expression;6.57799213748e-08!GO:0046034;ATP metabolic process;6.66682890587424e-08!GO:0008026;ATP-dependent helicase activity;7.1890895610643e-08!GO:0009142;nucleoside triphosphate biosynthetic process;8.57169940352376e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.57169940352376e-08!GO:0004842;ubiquitin-protein ligase activity;8.66126190485419e-08!GO:0006399;tRNA metabolic process;8.83179231320429e-08!GO:0005783;endoplasmic reticulum;9.47334470534612e-08!GO:0016023;cytoplasmic membrane-bound vesicle;1.07331079269958e-07!GO:0019787;small conjugating protein ligase activity;1.2511156769519e-07!GO:0009055;electron carrier activity;1.33064172928051e-07!GO:0045333;cellular respiration;1.51124215978065e-07!GO:0006754;ATP biosynthetic process;1.59993983961666e-07!GO:0006753;nucleoside phosphate metabolic process;1.59993983961666e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.60127467640633e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.60127467640633e-07!GO:0065002;intracellular protein transport across a membrane;1.68100961777677e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.0978127551603e-07!GO:0046930;pore complex;2.0978127551603e-07!GO:0009260;ribonucleotide biosynthetic process;2.26944323574087e-07!GO:0017038;protein import;2.63207588202776e-07!GO:0006164;purine nucleotide biosynthetic process;3.22233642487449e-07!GO:0030554;adenyl nucleotide binding;3.29844999361619e-07!GO:0000245;spliceosome assembly;3.39254572709566e-07!GO:0043566;structure-specific DNA binding;3.98096719314474e-07!GO:0009152;purine ribonucleotide biosynthetic process;4.27150972328398e-07!GO:0031982;vesicle;4.27150972328398e-07!GO:0044431;Golgi apparatus part;4.87391884251896e-07!GO:0051028;mRNA transport;6.20183503404865e-07!GO:0005874;microtubule;6.84196386597326e-07!GO:0015631;tubulin binding;7.39339688221769e-07!GO:0031410;cytoplasmic vesicle;7.93601396177311e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.67051110099073e-07!GO:0045449;regulation of transcription;9.11203138465323e-07!GO:0003697;single-stranded DNA binding;1.00817942569738e-06!GO:0045259;proton-transporting ATP synthase complex;1.17941263637955e-06!GO:0007010;cytoskeleton organization and biogenesis;1.18200329855996e-06!GO:0000279;M phase;1.28625579012756e-06!GO:0048519;negative regulation of biological process;1.48185124067063e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.83155656173399e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.83155656173399e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.83155656173399e-06!GO:0006099;tricarboxylic acid cycle;1.85336422403854e-06!GO:0046356;acetyl-CoA catabolic process;1.85336422403854e-06!GO:0044432;endoplasmic reticulum part;1.95561095148779e-06!GO:0032446;protein modification by small protein conjugation;2.02744438495182e-06!GO:0003677;DNA binding;2.07785363987295e-06!GO:0005525;GTP binding;2.25441426754343e-06!GO:0016881;acid-amino acid ligase activity;2.32233363707571e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.81787329334796e-06!GO:0005768;endosome;2.98365456921426e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.03146495407435e-06!GO:0003729;mRNA binding;3.46465723006591e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.81980916167611e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.06774851748676e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.07509167272777e-06!GO:0006355;regulation of transcription, DNA-dependent;4.31884797444678e-06!GO:0031252;leading edge;4.38127463299434e-06!GO:0065007;biological regulation;5.05570370724499e-06!GO:0006084;acetyl-CoA metabolic process;5.75317486348599e-06!GO:0005667;transcription factor complex;5.79163299381537e-06!GO:0051188;cofactor biosynthetic process;5.79163299381537e-06!GO:0016567;protein ubiquitination;5.79163299381537e-06!GO:0043038;amino acid activation;7.07307035977319e-06!GO:0006418;tRNA aminoacylation for protein translation;7.07307035977319e-06!GO:0043039;tRNA aminoacylation;7.07307035977319e-06!GO:0007005;mitochondrion organization and biogenesis;8.33293694562234e-06!GO:0048475;coated membrane;8.57231818304624e-06!GO:0030117;membrane coat;8.57231818304624e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.02335827949618e-05!GO:0006752;group transfer coenzyme metabolic process;1.05143851425957e-05!GO:0016363;nuclear matrix;1.17742719488685e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.3288336812726e-05!GO:0016564;transcription repressor activity;1.50829175404137e-05!GO:0006793;phosphorus metabolic process;1.73942053854354e-05!GO:0006796;phosphate metabolic process;1.73942053854354e-05!GO:0005762;mitochondrial large ribosomal subunit;1.76614780864716e-05!GO:0000315;organellar large ribosomal subunit;1.76614780864716e-05!GO:0003724;RNA helicase activity;1.80834081688955e-05!GO:0007017;microtubule-based process;1.9016595184637e-05!GO:0006461;protein complex assembly;1.90643728271275e-05!GO:0005793;ER-Golgi intermediate compartment;1.91234529579579e-05!GO:0051187;cofactor catabolic process;1.91234529579579e-05!GO:0032561;guanyl ribonucleotide binding;2.95663354022382e-05!GO:0019001;guanyl nucleotide binding;2.95663354022382e-05!GO:0000139;Golgi membrane;2.96649247415973e-05!GO:0009109;coenzyme catabolic process;3.00512573521764e-05!GO:0009108;coenzyme biosynthetic process;3.83878859027942e-05!GO:0030120;vesicle coat;4.02746106428165e-05!GO:0030662;coated vesicle membrane;4.02746106428165e-05!GO:0016310;phosphorylation;4.07918605206386e-05!GO:0009892;negative regulation of metabolic process;4.20957433080917e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.3543607665434e-05!GO:0051427;hormone receptor binding;4.51928870915372e-05!GO:0004298;threonine endopeptidase activity;4.56242187722501e-05!GO:0005813;centrosome;5.10305782094883e-05!GO:0006613;cotranslational protein targeting to membrane;5.33168828198405e-05!GO:0003714;transcription corepressor activity;5.33168828198405e-05!GO:0045045;secretory pathway;5.45818662928796e-05!GO:0043623;cellular protein complex assembly;6.32449061401521e-05!GO:0031324;negative regulation of cellular metabolic process;6.33175411887127e-05!GO:0008092;cytoskeletal protein binding;6.4855816080242e-05!GO:0045786;negative regulation of progression through cell cycle;6.73036382474479e-05!GO:0005789;endoplasmic reticulum membrane;7.24510641647589e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.36646520907918e-05!GO:0000902;cell morphogenesis;8.3939281583368e-05!GO:0032989;cellular structure morphogenesis;8.3939281583368e-05!GO:0008017;microtubule binding;8.96871474230508e-05!GO:0006261;DNA-dependent DNA replication;9.36490001731139e-05!GO:0016126;sterol biosynthetic process;9.51741407897545e-05!GO:0051168;nuclear export;9.70818113721786e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.73740266982306e-05!GO:0035257;nuclear hormone receptor binding;9.85666417569417e-05!GO:0048471;perinuclear region of cytoplasm;0.000100734795211775!GO:0000314;organellar small ribosomal subunit;0.000101873877913757!GO:0005763;mitochondrial small ribosomal subunit;0.000101873877913757!GO:0019843;rRNA binding;0.000102452672945405!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000102626712085168!GO:0051170;nuclear import;0.000103582330870273!GO:0005905;coated pit;0.000103871925775734!GO:0000786;nucleosome;0.000110135015231162!GO:0006606;protein import into nucleus;0.00011131496572072!GO:0012501;programmed cell death;0.000113741229091085!GO:0005770;late endosome;0.000138885387898561!GO:0006414;translational elongation;0.000145474645132128!GO:0051246;regulation of protein metabolic process;0.000155638368299187!GO:0006915;apoptosis;0.000157704308122413!GO:0003899;DNA-directed RNA polymerase activity;0.00016435080413161!GO:0003713;transcription coactivator activity;0.00016543194363779!GO:0043069;negative regulation of programmed cell death;0.00017674295169637!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000182075185505664!GO:0005815;microtubule organizing center;0.000196877318357769!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00020192331007166!GO:0006916;anti-apoptosis;0.000203668337722755!GO:0043066;negative regulation of apoptosis;0.000222176239716405!GO:0008219;cell death;0.000253094152156111!GO:0016265;death;0.000253094152156111!GO:0008361;regulation of cell size;0.000276877247300193!GO:0044452;nucleolar part;0.00027997973659153!GO:0043681;protein import into mitochondrion;0.000303389674938203!GO:0006695;cholesterol biosynthetic process;0.000306777898638344!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000316339168293558!GO:0016049;cell growth;0.000323061884084577!GO:0044440;endosomal part;0.000343419735045769!GO:0010008;endosome membrane;0.000343419735045769!GO:0008186;RNA-dependent ATPase activity;0.000354986518608838!GO:0016481;negative regulation of transcription;0.000371540857745737!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000389153593623565!GO:0051128;regulation of cellular component organization and biogenesis;0.000392599926363509!GO:0003682;chromatin binding;0.000412132412891675!GO:0005769;early endosome;0.000420962438979475!GO:0003690;double-stranded DNA binding;0.000451044257807305!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000451044257807305!GO:0016779;nucleotidyltransferase activity;0.000467663020689555!GO:0005875;microtubule associated complex;0.000472969315239482!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000548176935764136!GO:0005798;Golgi-associated vesicle;0.000608063406968955!GO:0005819;spindle;0.000626619584200108!GO:0009056;catabolic process;0.00064199580994599!GO:0031124;mRNA 3'-end processing;0.000658576865194764!GO:0003684;damaged DNA binding;0.000660938405315336!GO:0043021;ribonucleoprotein binding;0.000677373844117244!GO:0006612;protein targeting to membrane;0.000782792731027557!GO:0030027;lamellipodium;0.000891605405012308!GO:0051920;peroxiredoxin activity;0.000965071509512871!GO:0000151;ubiquitin ligase complex;0.000973296419860978!GO:0005657;replication fork;0.00102007920103179!GO:0016853;isomerase activity;0.00103768091523369!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00103768091523369!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00103768091523369!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00103768091523369!GO:0004004;ATP-dependent RNA helicase activity;0.00104954739241795!GO:0006383;transcription from RNA polymerase III promoter;0.00121337083227402!GO:0008250;oligosaccharyl transferase complex;0.0012155675525707!GO:0016044;membrane organization and biogenesis;0.00122080254968808!GO:0051087;chaperone binding;0.00134360835651388!GO:0007399;nervous system development;0.00141371398337722!GO:0004576;oligosaccharyl transferase activity;0.00165124144603839!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00177705642488201!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0018075456860246!GO:0019899;enzyme binding;0.00187426702128942!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00188160636296162!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00188793412306282!GO:0000775;chromosome, pericentric region;0.00198436631581643!GO:0008139;nuclear localization sequence binding;0.00214334572661258!GO:0005869;dynactin complex;0.00219556292167337!GO:0016563;transcription activator activity;0.00229984103335873!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00232552761687022!GO:0005684;U2-dependent spliceosome;0.00234179394600754!GO:0008270;zinc ion binding;0.0023817783953941!GO:0030036;actin cytoskeleton organization and biogenesis;0.00252637989920491!GO:0015980;energy derivation by oxidation of organic compounds;0.00254989354293926!GO:0006352;transcription initiation;0.0025556452679428!GO:0001558;regulation of cell growth;0.0025660422589582!GO:0006626;protein targeting to mitochondrion;0.00259525291727093!GO:0009117;nucleotide metabolic process;0.00259789639179953!GO:0008654;phospholipid biosynthetic process;0.00260952693154416!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00265051566737121!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00265051566737121!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00265806144480083!GO:0048487;beta-tubulin binding;0.00272001456997212!GO:0048468;cell development;0.00272001456997212!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00275310169127538!GO:0015399;primary active transmembrane transporter activity;0.00275310169127538!GO:0051329;interphase of mitotic cell cycle;0.0028119618539751!GO:0008180;signalosome;0.0028119618539751!GO:0031123;RNA 3'-end processing;0.00285426022435137!GO:0045454;cell redox homeostasis;0.00295387766447436!GO:0016740;transferase activity;0.00304971711828022!GO:0016859;cis-trans isomerase activity;0.00312721738055701!GO:0006595;polyamine metabolic process;0.00314492122765126!GO:0050767;regulation of neurogenesis;0.00315954716313361!GO:0006405;RNA export from nucleus;0.00325306636155856!GO:0030880;RNA polymerase complex;0.00327613351720422!GO:0006402;mRNA catabolic process;0.00328082227135319!GO:0051252;regulation of RNA metabolic process;0.00367289902884922!GO:0005048;signal sequence binding;0.00369762519194905!GO:0006818;hydrogen transport;0.00371363254530233!GO:0000059;protein import into nucleus, docking;0.00372748959959145!GO:0006839;mitochondrial transport;0.00385092457767875!GO:0007051;spindle organization and biogenesis;0.00399376331792693!GO:0016272;prefoldin complex;0.00400219714845469!GO:0031072;heat shock protein binding;0.00406785481106474!GO:0016197;endosome transport;0.00408583311200669!GO:0008033;tRNA processing;0.00425488413947211!GO:0015992;proton transport;0.00426096189834528!GO:0032940;secretion by cell;0.00442879653791107!GO:0007264;small GTPase mediated signal transduction;0.00445225378881981!GO:0001726;ruffle;0.00459851744316928!GO:0003711;transcription elongation regulator activity;0.00463899302953468!GO:0008094;DNA-dependent ATPase activity;0.00470329711517519!GO:0000049;tRNA binding;0.0049575366873939!GO:0030118;clathrin coat;0.00496796997424025!GO:0007006;mitochondrial membrane organization and biogenesis;0.00497759836198027!GO:0051325;interphase;0.00532342704346738!GO:0008287;protein serine/threonine phosphatase complex;0.00534987451366087!GO:0043488;regulation of mRNA stability;0.00550672443074728!GO:0043487;regulation of RNA stability;0.00550672443074728!GO:0005741;mitochondrial outer membrane;0.00559374669098832!GO:0048500;signal recognition particle;0.00570430319539521!GO:0005637;nuclear inner membrane;0.00576465527613487!GO:0005885;Arp2/3 protein complex;0.00583867186534848!GO:0018196;peptidyl-asparagine modification;0.00593166416272734!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00593166416272734!GO:0003746;translation elongation factor activity;0.00611809038175488!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00619365404600203!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00625135004121538!GO:0016251;general RNA polymerase II transcription factor activity;0.00649028963849864!GO:0031968;organelle outer membrane;0.0065993896110548!GO:0006891;intra-Golgi vesicle-mediated transport;0.00664626551102874!GO:0000776;kinetochore;0.00679447787492539!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00724248796273396!GO:0033116;ER-Golgi intermediate compartment membrane;0.00736424390137906!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00738448538932223!GO:0000428;DNA-directed RNA polymerase complex;0.00738448538932223!GO:0006338;chromatin remodeling;0.00770037783438249!GO:0032508;DNA duplex unwinding;0.00796176101560398!GO:0032392;DNA geometric change;0.00796176101560398!GO:0030133;transport vesicle;0.00810229197353669!GO:0031901;early endosome membrane;0.00832394085253531!GO:0006401;RNA catabolic process;0.00832394085253531!GO:0006378;mRNA polyadenylation;0.00840521109468018!GO:0008312;7S RNA binding;0.00853604335920789!GO:0019867;outer membrane;0.00887700277776299!GO:0030867;rough endoplasmic reticulum membrane;0.00906980009201793!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00983612999670725!GO:0016585;chromatin remodeling complex;0.00991529232260617!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0102225288319004!GO:0000339;RNA cap binding;0.0104072753944081!GO:0045892;negative regulation of transcription, DNA-dependent;0.0109151188217217!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0110978182074763!GO:0055083;monovalent inorganic anion homeostasis;0.0110978182074763!GO:0055064;chloride ion homeostasis;0.0110978182074763!GO:0030644;cellular chloride ion homeostasis;0.0110978182074763!GO:0030176;integral to endoplasmic reticulum membrane;0.0111943952468172!GO:0006376;mRNA splice site selection;0.0113511786084501!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0113511786084501!GO:0005832;chaperonin-containing T-complex;0.0113711435792468!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0120130632932685!GO:0045047;protein targeting to ER;0.0120130632932685!GO:0051539;4 iron, 4 sulfur cluster binding;0.0120600874804498!GO:0030427;site of polarized growth;0.0122859972565974!GO:0043624;cellular protein complex disassembly;0.0124703019666869!GO:0031902;late endosome membrane;0.0124800708965213!GO:0016584;nucleosome positioning;0.0125341996149733!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0128910604461048!GO:0015002;heme-copper terminal oxidase activity;0.0128910604461048!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0128910604461048!GO:0004129;cytochrome-c oxidase activity;0.0128910604461048!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0129990751797851!GO:0009116;nucleoside metabolic process;0.0132320166679424!GO:0007021;tubulin folding;0.0136100623398009!GO:0030029;actin filament-based process;0.0137531872635548!GO:0000209;protein polyubiquitination;0.0144816551049721!GO:0030521;androgen receptor signaling pathway;0.0149829555079798!GO:0005758;mitochondrial intermembrane space;0.0150586394375364!GO:0030137;COPI-coated vesicle;0.0156996622912448!GO:0032984;macromolecular complex disassembly;0.0163396312559866!GO:0051789;response to protein stimulus;0.0163428212579676!GO:0006986;response to unfolded protein;0.0163428212579676!GO:0005788;endoplasmic reticulum lumen;0.0168927384537838!GO:0043067;regulation of programmed cell death;0.0170195423528422!GO:0042981;regulation of apoptosis;0.0170195423528422!GO:0006268;DNA unwinding during replication;0.0170196325057325!GO:0006284;base-excision repair;0.0174984411455447!GO:0019887;protein kinase regulator activity;0.0177720141038831!GO:0030426;growth cone;0.017886417302808!GO:0008154;actin polymerization and/or depolymerization;0.0183446699321319!GO:0000178;exosome (RNase complex);0.0184039137011884!GO:0007019;microtubule depolymerization;0.0184868522390932!GO:0004674;protein serine/threonine kinase activity;0.018603134815783!GO:0007050;cell cycle arrest;0.0186227675816296!GO:0030658;transport vesicle membrane;0.0187025427117629!GO:0031970;organelle envelope lumen;0.0188906041835793!GO:0040029;regulation of gene expression, epigenetic;0.0203215948162619!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0203215948162619!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0205464316759547!GO:0004448;isocitrate dehydrogenase activity;0.0209678124940008!GO:0040008;regulation of growth;0.0210237245447255!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0212890853849819!GO:0008022;protein C-terminus binding;0.0217562311345544!GO:0003678;DNA helicase activity;0.0221634652427601!GO:0031529;ruffle organization and biogenesis;0.0224167650241658!GO:0000159;protein phosphatase type 2A complex;0.0226589637933468!GO:0030135;coated vesicle;0.0226628724353746!GO:0005876;spindle microtubule;0.0227766607337778!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0227869156055398!GO:0043022;ribosome binding;0.0228393083206058!GO:0030182;neuron differentiation;0.0228495638462657!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0229733094273833!GO:0043492;ATPase activity, coupled to movement of substances;0.0230785790808802!GO:0000075;cell cycle checkpoint;0.0232790172484416!GO:0000118;histone deacetylase complex;0.0234480216998832!GO:0051052;regulation of DNA metabolic process;0.0235477324466983!GO:0007052;mitotic spindle organization and biogenesis;0.0235477324466983!GO:0019207;kinase regulator activity;0.0240524705725492!GO:0031371;ubiquitin conjugating enzyme complex;0.0243554868600798!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0243554868600798!GO:0043241;protein complex disassembly;0.0245275929556612!GO:0005521;lamin binding;0.0246829960451106!GO:0006302;double-strand break repair;0.0257665049289138!GO:0030663;COPI coated vesicle membrane;0.0258805045516872!GO:0030126;COPI vesicle coat;0.0258805045516872!GO:0046914;transition metal ion binding;0.0268786566633545!GO:0006611;protein export from nucleus;0.0274013307938218!GO:0046128;purine ribonucleoside metabolic process;0.0276363056223111!GO:0042278;purine nucleoside metabolic process;0.0276363056223111!GO:0000792;heterochromatin;0.0282885834920218!GO:0035258;steroid hormone receptor binding;0.0287035073953106!GO:0030660;Golgi-associated vesicle membrane;0.0292322015371543!GO:0043433;negative regulation of transcription factor activity;0.0292997165893416!GO:0030516;regulation of axon extension;0.0294739111034489!GO:0050770;regulation of axonogenesis;0.0297094366044686!GO:0006360;transcription from RNA polymerase I promoter;0.0302202901522287!GO:0007004;telomere maintenance via telomerase;0.0304816170779923!GO:0009165;nucleotide biosynthetic process;0.0308773642681162!GO:0022008;neurogenesis;0.0321186688360661!GO:0046966;thyroid hormone receptor binding;0.0321902104958942!GO:0031109;microtubule polymerization or depolymerization;0.0322816691684436!GO:0051287;NAD binding;0.0326495650592469!GO:0016741;transferase activity, transferring one-carbon groups;0.0327949430451447!GO:0030134;ER to Golgi transport vesicle;0.0329262960581412!GO:0012506;vesicle membrane;0.0331424359288791!GO:0044433;cytoplasmic vesicle part;0.0332148336394035!GO:0050811;GABA receptor binding;0.0338833202310172!GO:0051540;metal cluster binding;0.0339003804860619!GO:0051536;iron-sulfur cluster binding;0.0339003804860619!GO:0008320;protein transmembrane transporter activity;0.0344319042061911!GO:0030032;lamellipodium biogenesis;0.0344319042061911!GO:0006979;response to oxidative stress;0.0344319042061911!GO:0030127;COPII vesicle coat;0.0344319042061911!GO:0012507;ER to Golgi transport vesicle membrane;0.0344319042061911!GO:0043284;biopolymer biosynthetic process;0.0344319042061911!GO:0005652;nuclear lamina;0.0349013448526084!GO:0000910;cytokinesis;0.0352702300052125!GO:0008601;protein phosphatase type 2A regulator activity;0.0355364453722672!GO:0000082;G1/S transition of mitotic cell cycle;0.0358172481585114!GO:0003730;mRNA 3'-UTR binding;0.0358510765742309!GO:0033673;negative regulation of kinase activity;0.0363210795624651!GO:0006469;negative regulation of protein kinase activity;0.0363210795624651!GO:0000096;sulfur amino acid metabolic process;0.0366292175342036!GO:0008276;protein methyltransferase activity;0.0371274708257523!GO:0005784;translocon complex;0.0376105461929368!GO:0043631;RNA polyadenylation;0.0377906465021461!GO:0046474;glycerophospholipid biosynthetic process;0.0384482652291714!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0391376495683219!GO:0010257;NADH dehydrogenase complex assembly;0.0391376495683219!GO:0033108;mitochondrial respiratory chain complex assembly;0.0391376495683219!GO:0043130;ubiquitin binding;0.0397153319259477!GO:0032182;small conjugating protein binding;0.0397153319259477!GO:0022890;inorganic cation transmembrane transporter activity;0.0401717533281254!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0404552416738958!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0410534587575699!GO:0043414;biopolymer methylation;0.0415756225394457!GO:0048699;generation of neurons;0.0420669014361468!GO:0048146;positive regulation of fibroblast proliferation;0.0422548359856444!GO:0000228;nuclear chromosome;0.0426277351496422!GO:0006607;NLS-bearing substrate import into nucleus;0.0426471523261065!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0431768959115056!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0432601305503449!GO:0005791;rough endoplasmic reticulum;0.0438232954023556!GO:0008168;methyltransferase activity;0.0438516264685269!GO:0006144;purine base metabolic process;0.0444870804608656!GO:0046467;membrane lipid biosynthetic process;0.0444870804608656!GO:0051098;regulation of binding;0.0444907212442445!GO:0022406;membrane docking;0.0444907212442445!GO:0048278;vesicle docking;0.0444907212442445!GO:0016408;C-acyltransferase activity;0.0445582254547449!GO:0051101;regulation of DNA binding;0.0445595042591391!GO:0030132;clathrin coat of coated pit;0.0445968310580369!GO:0022415;viral reproductive process;0.0451224792813161!GO:0030911;TPR domain binding;0.0453892662766133!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0458194746203675!GO:0005862;muscle thin filament tropomyosin;0.0466727148937667!GO:0051261;protein depolymerization;0.0470608205213472!GO:0042585;germinal vesicle;0.0477916857454697!GO:0045893;positive regulation of transcription, DNA-dependent;0.0478931784111308!GO:0030659;cytoplasmic vesicle membrane;0.0480189883891752!GO:0005881;cytoplasmic microtubule;0.0481202669631499!GO:0000781;chromosome, telomeric region;0.0484726031838371!GO:0007034;vacuolar transport;0.0486237552156813!GO:0030508;thiol-disulfide exchange intermediate activity;0.049192542453055
|sample_id=11494
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=brain
|top_motifs=SOX2:3.34815793636;NKX2-3_NKX2-5:2.74436713956;PRRX1,2:2.31190426673;TFDP1:2.29631260574;FOXM1:2.23379154006;IKZF2:2.18135033216;ZNF384:2.16019909792;LHX3,4:2.1411839302;POU6F1:2.05731205503;JUN:2.056103411;SOX{8,9,10}:2.04534767518;POU5F1:2.01832687505;T:1.92177332646;MZF1:1.88240860146;EGR1..3:1.86422737271;OCT4_SOX2{dimer}:1.84249393873;NKX6-1,2:1.82787163384;PAX8:1.77095291482;ADNP_IRX_SIX_ZHX:1.74845751373;MED-1{core}:1.74749048064;CDX1,2,4:1.71360223574;ONECUT1,2:1.70813130661;LEF1_TCF7_TCF7L1,2:1.70077257386;SOX17:1.63187064063;GFI1:1.51001213993;BREu{core}:1.48829484203;FOXD3:1.47979092474;VSX1,2:1.47491394275;RREB1:1.44867802192;CDC5L:1.41888887165;NR1H4:1.41477614278;MTE{core}:1.40258061595;YY1:1.39417895506;CUX2:1.39324541835;RFX1:1.36034332207;EVI1:1.34913725997;PBX1:1.33809720622;NHLH1,2:1.32779435796;NRF1:1.32496688367;NANOG:1.28462486737;PRDM1:1.28024244521;ALX1:1.26577884682;FOXP3:1.254573701;SMAD1..7,9:1.18977340907;GATA4:1.18523390789;ZFP161:1.18461528915;PAX4:1.16052355923;ZIC1..3:1.12787301236;ATF2:1.1191000575;NFY{A,B,C}:1.11754759167;ZBTB6:1.11412194545;STAT1,3:1.10528985759;RBPJ:1.08362830683;GZF1:1.04913438759;PATZ1:1.04638441481;GCM1,2:1.0366867867;ELK1,4_GABP{A,B1}:0.991236237824;GTF2I:0.984170295394;AHR_ARNT_ARNT2:0.980361649672;POU1F1:0.968876264788;PAX5:0.956714210302;POU2F1..3:0.950343438929;FOXP1:0.934666237823;POU3F1..4:0.918788830847;ATF4:0.908821215278;MAZ:0.889622576082;REST:0.880980476749;ZNF143:0.862230345634;FOXQ1:0.862067974471;CREB1:0.771712090163;GFI1B:0.734382356078;FOXL1:0.728532658625;KLF4:0.710569278114;TEF:0.710300687944;E2F1..5:0.708992217488;ARID5B:0.69413888463;PAX6:0.68272764793;TBP:0.680959875586;TFAP2B:0.673531422256;PDX1:0.66817872936;ZBTB16:0.643490357724;TGIF1:0.638620849594;MYFfamily:0.554912738224;LMO2:0.532400182218;PPARG:0.530660131721;GTF2A1,2:0.503654293354;UFEwm:0.457165154391;PAX3,7:0.44605294861;HOXA9_MEIS1:0.434427222994;HOX{A4,D4}:0.402721192679;HMGA1,2:0.388236212497;HBP1_HMGB_SSRP1_UBTF:0.378313351531;NKX2-1,4:0.36529109359;BPTF:0.318787815219;NR3C1:0.293745178622;PAX1,9:0.291222128815;HAND1,2:0.290658305426;NR6A1:0.258366021347;NKX3-1:0.253531646603;MYB:0.210654223078;DBP:0.20726522984;NFIX:0.205003929243;HIC1:0.203397683274;ATF5_CREB3:0.184387366697;FOXN1:0.179851137602;NKX2-2,8:0.169491762642;STAT5{A,B}:0.141337363878;MAFB:0.108419359559;SOX5:0.0885884732857;RFX2..5_RFXANK_RFXAP:0.0844859711764;XCPE1{core}:0.0643319353471;TLX2:0.0490450627382;SRF:0.0476711409014;SPZ1:0.0276221696913;AIRE:-0.00577573711547;NFE2L1:-0.00840517662742;ZNF423:-0.0211255474208;MTF1:-0.042322185566;ATF6:-0.0509952377282;STAT2,4,6:-0.0739278597739;MEF2{A,B,C,D}:-0.0756674352272;HOX{A5,B5}:-0.0782208651706;TOPORS:-0.101261758615;CRX:-0.120117367605;HNF1A:-0.12574358508;TLX1..3_NFIC{dimer}:-0.176463180076;FOS_FOS{B,L1}_JUN{B,D}:-0.208352887311;HSF1,2:-0.208597647933;NKX3-2:-0.23147606718;HNF4A_NR2F1,2:-0.268896579777;NFIL3:-0.284525692687;PITX1..3:-0.296165379486;ESRRA:-0.308331236101;AR:-0.318498739131;PAX2:-0.356062973862;BACH2:-0.404732748509;TAL1_TCF{3,4,12}:-0.414091088074;FOX{F1,F2,J1}:-0.420755976843;NFE2L2:-0.423775363158;NFATC1..3:-0.424047944528;GATA6:-0.445298571196;EBF1:-0.457862139276;FOSL2:-0.468882850176;NFE2:-0.488054635807;MYOD1:-0.490409985319;RUNX1..3:-0.508607308238;EP300:-0.512963500618;RORA:-0.51406974908;NFKB1_REL_RELA:-0.517814311111;TP53:-0.533491208462;XBP1:-0.536913496107;SNAI1..3:-0.542541912174;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.568313707745;EN1,2:-0.590985736878;CEBPA,B_DDIT3:-0.593190001357;SPI1:-0.616233904435;DMAP1_NCOR{1,2}_SMARC:-0.638729290599;TEAD1:-0.667276225134;MYBL2:-0.687620742316;NANOG{mouse}:-0.697194736494;SREBF1,2:-0.70519977172;SP1:-0.710017898517;SPIB:-0.721871997231;FOX{D1,D2}:-0.730360355766;NR5A1,2:-0.748809774748;IRF7:-0.779719458512;HES1:-0.852401994766;ZEB1:-0.859917178882;HMX1:-0.887819493088;bHLH_family:-0.9150432536;IRF1,2:-0.933268843096;HLF:-0.962493472877;TFCP2:-1.0177672818;FOXA2:-1.02306925074;HOX{A6,A7,B6,B7}:-1.02930688148;FOX{I1,J2}:-1.0514028415;ELF1,2,4:-1.11821736258;ESR1:-1.16761021101;ZNF238:-1.17082921476;ETS1,2:-1.21311887842;GLI1..3:-1.22580203996;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.24049554016;TFAP2{A,C}:-1.27679290557;ALX4:-1.31596032432;FOXO1,3,4:-1.42608965998;TFAP4:-1.45564968707;ZNF148:-1.49839447864;RXRA_VDR{dimer}:-1.59202907042;RXR{A,B,G}:-1.63014397007;TBX4,5:-1.69866712143;IKZF1:-1.74352159547;HIF1A:-1.80993416983
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11494-119E9;search_select_hide=table117:FF:11494-119E9
}}
}}

Latest revision as of 18:04, 4 June 2020

Name:Neurons, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12338
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebrain
dev stageNA
sexNA
ageNA
cell typeneuron
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberSC1525
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005481
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12338 CAGE DRX008375 DRR009247
Accession ID Hg19

Library idBAMCTSS
CNhs12338 DRZ000672 DRZ002057
Accession ID Hg38

Library idBAMCTSS
CNhs12338 DRZ012022 DRZ013407
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.406
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.183
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.00553
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.187
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain1.196
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0891
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.612
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.249
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.185
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.521
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.249
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12338

Jaspar motifP-value
MA0002.22.15388e-5
MA0003.10.134
MA0004.10.442
MA0006.10.377
MA0007.10.206
MA0009.10.163
MA0014.10.517
MA0017.10.00107
MA0018.20.00336
MA0019.10.377
MA0024.10.00198
MA0025.10.125
MA0027.10.517
MA0028.10.646
MA0029.10.611
MA0030.10.252
MA0031.10.0216
MA0035.20.0753
MA0038.10.00157
MA0039.20.0617
MA0040.10.214
MA0041.10.493
MA0042.10.59
MA0043.10.103
MA0046.10.0237
MA0047.20.0139
MA0048.10.954
MA0050.18.00699e-8
MA0051.10.00146
MA0052.10.244
MA0055.10.59
MA0057.10.302
MA0058.10.257
MA0059.10.229
MA0060.11.64252e-7
MA0061.10.0214
MA0062.20.666
MA0065.22.59684e-4
MA0066.10.133
MA0067.10.532
MA0068.10.615
MA0069.10.38
MA0070.10.0128
MA0071.10.0698
MA0072.10.589
MA0073.10.162
MA0074.10.169
MA0076.10.252
MA0077.10.0208
MA0078.10.151
MA0079.20.428
MA0080.27.80918e-13
MA0081.10.0591
MA0083.10.434
MA0084.10.134
MA0087.10.364
MA0088.10.263
MA0090.10.076
MA0091.10.716
MA0092.10.657
MA0093.10.475
MA0099.22.07519e-10
MA0100.10.375
MA0101.10.0139
MA0102.20.0308
MA0103.10.0558
MA0104.20.903
MA0105.10.0446
MA0106.10.184
MA0107.10.0115
MA0108.29.58465e-4
MA0111.10.603
MA0112.22.15012e-4
MA0113.10.085
MA0114.10.00671
MA0115.10.469
MA0116.10.0196
MA0117.10.66
MA0119.10.181
MA0122.10.311
MA0124.10.72
MA0125.10.0222
MA0131.10.52
MA0135.10.0906
MA0136.12.12459e-9
MA0137.20.383
MA0138.20.463
MA0139.10.299
MA0140.10.0076
MA0141.10.00979
MA0142.10.0334
MA0143.10.0905
MA0144.10.0244
MA0145.10.0754
MA0146.10.013
MA0147.10.759
MA0148.10.0332
MA0149.10.0169
MA0150.11.02179e-4
MA0152.10.14
MA0153.10.0528
MA0154.10.0714
MA0155.10.492
MA0156.17.44223e-6
MA0157.10.00418
MA0159.10.00155
MA0160.10.0083
MA0162.10.149
MA0163.17.37565e-4
MA0164.10.562
MA0258.10.0101
MA0259.10.845



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12338

Novel motifP-value
10.102
100.129
1000.776
1010.702
1020.71
1030.192
1040.19
1050.191
1060.0138
1070.11
1080.966
1090.00157
110.0261
1100.168
1110.427
1120.148
1130.772
1140.0316
1150.18
1160.785
1170.0384
1180.261
1190.267
120.655
1200.403
1210.245
1220.535
1230.524
1240.675
1250.406
1260.00955
1270.63
1280.1
1290.717
130.0206
1300.488
1310.477
1320.994
1330.618
1340.812
1350.781
1360.00676
1370.33
1380.327
1390.0958
140.676
1400.976
1410.547
1420.939
1430.0916
1440.967
1450.367
1460.386
1470.843
1480.0621
1490.136
150.12
1500.298
1510.408
1520.0376
1530.954
1540.815
1550.816
1560.945
1570.142
1580.301
1590.0431
160.054
1600.173
1610.109
1620.799
1630.264
1640.0263
1650.393
1660.658
1670.887
1680.192
1690.00927
170.0741
180.329
190.106
20.255
200.79
210.139
220.074
230.0407
240.133
250.744
260.0658
270.327
280.735
290.101
30.0527
300.559
310.768
320.00946
330.184
340.422
350.725
360.3
370.0467
380.276
390.142
40.382
400.0701
410.364
420.294
430.134
440.595
450.463
460.178
470.142
480.0763
490.211
50.258
500.367
510.516
520.328
530.477
540.349
550.183
560.378
570.533
580.171
590.0253
60.964
600.0533
610.0345
620.144
630.136
640.375
650.179
660.905
670.984
680.18
690.496
70.218
700.0236
710.018
720.175
730.024
740.896
750.0757
760.544
770.0596
780.0133
790.629
80.26
800.169
810.769
820.234
830.192
840.723
850.033
860.276
870.0252
880.479
890.432
90.278
900.81
910.819
920.108
930.557
940.279
950.0116
960.887
970.561
980.426
990.5



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12338


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000348 (human neuron samples)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)

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