FFCP PHASE1:Mm9::chr10:59764666..59764687,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:59764666..59764687,+ | |||
|description=CAGE_peak_at_chr10:59764666..59764687,+ | |description=CAGE_peak_at_chr10:59764666..59764687,+ | ||
|id=chr10:59764666..59764687,+ | |id=chr10:59764666..59764687,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.03e-14,4;CL:0000766,3.03e-14,4;CL:0000234,3.03e-14,4;CL:0000576,3.03e-14,4;CL:0000235,3.03e-14,4;CL:0000864,3.03e-14,4;CL:0002009,3.03e-14,4;CL:0000040,3.03e-14,4;CL:0000559,3.03e-14,4;CL:0002092,2.26e-11,3;CL:0002540,2.26e-11,3;CL:0000192,1.74e-10,3;CL:0000359,1.74e-10,3;CL:0002539,1.74e-10,3;CL:0000514,1.74e-10,3;CL:0000680,1.08e-08,6;CL:0000187,1.08e-08,6;CL:0000056,1.08e-08,6;CL:0000473,3.75e-08,7;CL:0000557,3.75e-08,7;CL:0002476,3.97e-08,2;CL:0000878,9.27e-08,2;CL:0000129,9.27e-08,2;CL:0000222,1.85e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.12e-11,32;UBERON:0001135,1.74e-10,3;UBERON:0004237,1.74e-10,3;UBERON:0004695,1.74e-10,3;UBERON:0002111,1.74e-10,3;UBERON:0004178,1.74e-10,3;UBERON:0002371,6.07e-10,16;UBERON:0000947,5.72e-08,4;UBERON:0001637,5.72e-08,4;UBERON:0004573,5.72e-08,4;UBERON:0003509,5.72e-08,4;UBERON:0004571,5.72e-08,4;UBERON:0010191,5.72e-08,4;UBERON:0004572,5.72e-08,4;UBERON:0001987,1.82e-07,2;UBERON:0003124,1.82e-07,2;UBERON:0004340,1.82e-07,2;UBERON:0001474,5.87e-07,22;UBERON:0004765,5.87e-07,22;UBERON:0001434,5.87e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0.404950534779652,0.699561878128147,0,0.137114433605739,0,0.595303031057488,0.0992909512008853,0.261199789138935,0,0,0,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.88845226963366,3.54819259268301,1.83546752161682,0.782391344348039,0.218025156380447,0.878744730937887,1.1665793944457,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0.889294796111139,6.74924787961049,7.9109309005358,7.8152812644071,2.69640099466564,4.99483796918021,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,2.25105044012672,0.30559649555362,0,0.284743361598206,0,0.302904773332736,0.453429360640713,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0.505524445014783,1.1418387971906,0,0.445326417194474,0.173485326766136,0.608930956624282,0.691846491768175,0,1.29347577849275,0.502666365318702,0.988779870937496,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,1.8850203613211,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0.255715457330331,0.83115217823824,0,0.101839363850316,0.373220911830279,0,1.47309299120532,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0,0,0.61734640922383,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0.233530684734339,0,0.32833492815819,0.243206428637567,0.438599962275997,0,0.268412837520744,0,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0.795825888164603,0,0.898819408654221,0.432276099749388,0,1.13800740571849,0,0,0.203651327845314,0,0.561086559122548,0.189709611372772,0,0,0.740382983530803,0,0,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,6.32327384422638,0,2.87536413054709,2.60498663367952,0,0,0,1.4473305640901,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,1.01254341007058,19.6028669121054,5.4390568381871,0.983528546038072,0.827810238914197,0.321101179975584,0.468846746368813,0.327869890753351,0.504941854408746,0,0,0.215423397732799,0.716906393857656,1.11399337041197,0,0.809621403349789,0.876767573733936,0.395287777946524,0,0.851640511249612,0.534196811001766,0.325773918707152,0.329940245945071,0,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0,0.727067458955011,0,0,0,0,0,0,0.258717367565509,0,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,13.6109590676952,1.0591603543191,0.220528398054962,0.16488625294148,0.968786560175433,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,0.854354403989263,0,0.185194527369712,0,1.0935538217682,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0.330613822901344,0,0.648074866458964,0,0,0.747582730219894,0.66183396182839,0.194451188344048,0.258319646955462,0,0.58678619322877,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0.316011120628178,0,0.513554785824136,0.909445760844565,0.358053391334963,0.596044064343795,0.360586348559907,0.147689527174577,0.100966449948148,0.304827226619999,0.403304740547362,0.194915761479505,0.577271049841977,0.350630706544707,0,0.221985953374065,0.538283139656854,0.335769232728157,0.579568782096571,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0.749431733813838,0,0.429742108096597,1.53030665655075,0.882365676478062,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0.404950534779652,0.699561878128147,0,0.137114433605739,0,0.595303031057488,0.0992909512008853,0.261199789138935,0,0,0,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.88845226963366,3.54819259268301,1.83546752161682,0.782391344348039,0.218025156380447,0.878744730937887,1.1665793944457,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0.889294796111139,6.74924787961049,7.9109309005358,7.8152812644071,2.69640099466564,4.99483796918021,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,2.25105044012672,0.30559649555362,0,0.284743361598206,0,0.302904773332736,0.453429360640713,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0.505524445014783,1.1418387971906,0,0.445326417194474,0.173485326766136,0.608930956624282,0.691846491768175,0,1.29347577849275,0.502666365318702,0.988779870937496,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,1.8850203613211,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0.255715457330331,0.83115217823824,0,0.101839363850316,0.373220911830279,0,1.47309299120532,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0,0,0.61734640922383,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0.233530684734339,0,0.32833492815819,0.243206428637567,0.438599962275997,0,0.268412837520744,0,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0.795825888164603,0,0.898819408654221,0.432276099749388,0,1.13800740571849,0,0,0.203651327845314,0,0.561086559122548,0.189709611372772,0,0,0.740382983530803,0,0,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,6.32327384422638,0,2.87536413054709,2.60498663367952,0,0,0,1.4473305640901,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,1.01254341007058,19.6028669121054,5.4390568381871,0.983528546038072,0.827810238914197,0.321101179975584,0.468846746368813,0.327869890753351,0.504941854408746,0,0,0.215423397732799,0.716906393857656,1.11399337041197,0,0.809621403349789,0.876767573733936,0.395287777946524,0,0.851640511249612,0.534196811001766,0.325773918707152,0.329940245945071,0,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0,0.727067458955011,0,0,0,0,0,0,0.258717367565509,0,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,13.6109590676952,1.0591603543191,0.220528398054962,0.16488625294148,0.968786560175433,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,0.854354403989263,0,0.185194527369712,0,1.0935538217682,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0.330613822901344,0,0.648074866458964,0,0,0.747582730219894,0.66183396182839,0.194451188344048,0.258319646955462,0,0.58678619322877,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0.316011120628178,0,0.513554785824136,0.909445760844565,0.358053391334963,0.596044064343795,0.360586348559907,0.147689527174577,0.100966449948148,0.304827226619999,0.403304740547362,0.194915761479505,0.577271049841977,0.350630706544707,0,0.221985953374065,0.538283139656854,0.335769232728157,0.579568782096571,0.375364950902364,0.549454872801795,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0.749431733813838,0,0.429742108096597,1.53030665655075,0.882365676478062,0.695603506861264 | ||
|short_description=p@chr10:59764666..59764687,+ | |short_description=p@chr10:59764666..59764687,+ | ||
}} | }} |
Latest revision as of 12:58, 4 August 2015
Short description: | p@chr10:59764666..59764687, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59764666..59764687, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.03e-14 | 4 |
myeloid leukocyte | 3.03e-14 | 4 |
phagocyte | 3.03e-14 | 4 |
monocyte | 3.03e-14 | 4 |
macrophage | 3.03e-14 | 4 |
tissue-resident macrophage | 3.03e-14 | 4 |
macrophage dendritic cell progenitor | 3.03e-14 | 4 |
monoblast | 3.03e-14 | 4 |
promonocyte | 3.03e-14 | 4 |
bone marrow cell | 2.26e-11 | 3 |
mesenchymal stem cell of the bone marrow | 2.26e-11 | 3 |
smooth muscle cell | 1.74e-10 | 3 |
vascular associated smooth muscle cell | 1.74e-10 | 3 |
aortic smooth muscle cell | 1.74e-10 | 3 |
smooth muscle myoblast | 1.74e-10 | 3 |
muscle precursor cell | 1.08e-08 | 6 |
muscle cell | 1.08e-08 | 6 |
myoblast | 1.08e-08 | 6 |
defensive cell | 3.75e-08 | 7 |
granulocyte monocyte progenitor cell | 3.75e-08 | 7 |
bone marrow macrophage | 3.97e-08 | 2 |
central nervous system macrophage | 9.27e-08 | 2 |
microglial cell | 9.27e-08 | 2 |
mesodermal cell | 1.85e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.12e-11 | 32 |
smooth muscle tissue | 1.74e-10 | 3 |
blood vessel smooth muscle | 1.74e-10 | 3 |
arterial system smooth muscle | 1.74e-10 | 3 |
artery smooth muscle tissue | 1.74e-10 | 3 |
aorta smooth muscle tissue | 1.74e-10 | 3 |
bone marrow | 6.07e-10 | 16 |
aorta | 5.72e-08 | 4 |
artery | 5.72e-08 | 4 |
systemic artery | 5.72e-08 | 4 |
arterial blood vessel | 5.72e-08 | 4 |
systemic arterial system | 5.72e-08 | 4 |
aortic system | 5.72e-08 | 4 |
arterial system | 5.72e-08 | 4 |
placenta | 1.82e-07 | 2 |
chorion | 1.82e-07 | 2 |
allantois | 1.82e-07 | 2 |
bone element | 5.87e-07 | 22 |
skeletal element | 5.87e-07 | 22 |
skeletal system | 5.87e-07 | 22 |