FFCP PHASE1:Mm9::chr10:42298108..42298119,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:42298108..42298119,- | |||
|description=CAGE_peak_at_chr10:42298108..42298119,- | |description=CAGE_peak_at_chr10:42298108..42298119,- | ||
|id=chr10:42298108..42298119,- | |id=chr10:42298108..42298119,- | ||
|ontology_enrichment_celltype=CL:0002609!1.19e-11!6;CL:0002613!1.08e-08!3 | |ontology_enrichment_celltype=CL:0002609!1.19e-11!6;CL:0002613!1.08e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.00e-60,6;CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002608,1.01e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.87e-19!49;UBERON:0000033!7.00e-19!63;UBERON:0002346!3.48e-13!71;UBERON:0003075!3.48e-13!71;UBERON:0007284!3.48e-13!71;UBERON:0002780!3.64e-13!39;UBERON:0001890!3.64e-13!39;UBERON:0006240!3.64e-13!39;UBERON:0003080!9.66e-13!40;UBERON:0000955!2.19e-12!50;UBERON:0006238!2.19e-12!50;UBERON:0007811!2.82e-12!86;UBERON:0002616!3.77e-11!49;UBERON:0000153!9.66e-11!94;UBERON:0002791!1.20e-10!29;UBERON:0003528!1.20e-10!29;UBERON:0001893!1.20e-10!29;UBERON:0001049!2.81e-10!52;UBERON:0005068!2.81e-10!52;UBERON:0006241!2.81e-10!52;UBERON:0007135!2.81e-10!52;UBERON:0004121!1.89e-09!102;UBERON:0000924!1.89e-09!102;UBERON:0006601!1.89e-09!102;UBERON:0000369!7.51e-09!5;UBERON:0002435!7.51e-09!5;UBERON:0000204!7.51e-09!5;UBERON:0010082!7.51e-09!5;UBERON:0002020!1.10e-08!34;UBERON:0000970!1.72e-08!9;UBERON:0000019!1.72e-08!9;UBERON:0000047!1.72e-08!9;UBERON:0004088!1.72e-08!9;UBERON:0002104!1.72e-08!9;UBERON:0001456!1.72e-08!9;UBERON:0003072!1.72e-08!9;UBERON:0003071!1.72e-08!9;UBERON:0004128!1.72e-08!9;UBERON:0000020!2.74e-08!12;UBERON:0001032!2.74e-08!12;UBERON:0004456!2.74e-08!12;UBERON:0005085!1.40e-07!13;UBERON:0001017!3.60e-07!73;UBERON:0005743!3.60e-07!73;UBERON:0000073!7.16e-07!75;UBERON:0001016!7.16e-07!75;UBERON:0001444!7.82e-07!11;UBERON:0000956!9.75e-07!21;UBERON:0001869!9.75e-07!21;UBERON:0000203!9.75e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0000956,7.93e-18,21;UBERON:0001869,7.93e-18,21;UBERON:0000203,7.93e-18,21;UBERON:0002020,8.43e-16,34;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42175720617976,3.24014251996058,2.10324961351382,0,0,3.67472397644862,4.69642807989358,0,0,0,0,0.527545150920775,0.457438218012048,1.04182674111352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753926112677186,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42175720617976,3.24014251996058,2.10324961351382,0,0,3.67472397644862,4.69642807989358,0,0,0,0,0.527545150920775,0.457438218012048,1.04182674111352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753926112677186,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr10:42298108..42298119,- | |short_description=p@chr10:42298108..42298119,- | ||
}} | }} |
Latest revision as of 09:30, 4 August 2015
Short description: | p@chr10:42298108..42298119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:42298108..42298119, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.00e-60 | 6 |
CNS neuron (sensu Vertebrata) | 4.18e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-23 | 23 |
hippocampal neuron | 1.01e-20 | 3 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 1.94e-18 | 29 |
regional part of telencephalon | 1.94e-18 | 29 |
telencephalon | 1.94e-18 | 29 |
cerebral cortex | 7.93e-18 | 21 |
cerebral hemisphere | 7.93e-18 | 21 |
pallium | 7.93e-18 | 21 |
gray matter | 8.43e-16 | 34 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
Ammon's horn | 1.78e-09 | 7 |
lobe parts of cerebral cortex | 1.78e-09 | 7 |
hippocampal formation | 1.78e-09 | 7 |
limbic system | 1.78e-09 | 7 |
limbic lobe | 1.78e-09 | 7 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |