FFCP PHASE1:Mm9::chr10:74779821..74779869,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11540 | |EntrezGene=11540 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q60613,Q8CAU3 | |UniProt=Q60613,Q8CAU3 | ||
|association_with_transcript=133bp_to_ENSMUST00000105420,NM_009630,uc007fqh.1_5end | |association_with_transcript=133bp_to_ENSMUST00000105420,NM_009630,uc007fqh.1_5end | ||
|cluster_id=chr10:74779821..74779869,+ | |||
|description=CAGE_peak_1_at_Adora2a_5end | |description=CAGE_peak_1_at_Adora2a_5end | ||
|id=chr10:74779821..74779869,+ | |id=chr10:74779821..74779869,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.06e-07!9;CL:0000789!5.06e-07!9;CL:0002420!5.06e-07!9;CL:0002419!5.06e-07!9;CL:0000790!5.06e-07!9 | |ontology_enrichment_celltype=CL:0000791!5.06e-07!9;CL:0000789!5.06e-07!9;CL:0002420!5.06e-07!9;CL:0002419!5.06e-07!9;CL:0000790!5.06e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.63e-07,9;CL:0000789,2.63e-07,9;CL:0002420,2.63e-07,9;CL:0002419,2.63e-07,9;CL:0000790,2.63e-07,9;CL:0000624,7.86e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.47e-10!29;UBERON:0000065!3.53e-10!41;UBERON:0003081!4.25e-10!88;UBERON:0002370!8.04e-10!23;UBERON:0000974!8.04e-10!23;UBERON:0004807!8.04e-10!23;UBERON:0005058!8.04e-10!23;UBERON:0003351!8.04e-10!23;UBERON:0009113!8.04e-10!23;UBERON:0003295!8.04e-10!23;UBERON:0009722!8.04e-10!23;UBERON:0005562!8.04e-10!23;UBERON:0007690!8.04e-10!23;UBERON:0001004!1.38e-09!42;UBERON:0006562!4.84e-09!24;UBERON:0001557!4.84e-09!24;UBERON:0001042!4.84e-09!24;UBERON:0008814!4.84e-09!24;UBERON:0009145!4.84e-09!24;UBERON:0003408!5.47e-09!24;UBERON:0002390!7.24e-09!45;UBERON:0003061!7.24e-09!45;UBERON:0002193!1.00e-08!48;UBERON:0005057!7.00e-08!51;UBERON:0002405!1.51e-07!70;UBERON:0002368!1.83e-07!60;UBERON:0005911!4.22e-07!69;UBERON:0000926!8.87e-07!193;UBERON:0004120!8.87e-07!193;UBERON:0006603!8.87e-07!193;UBERON:0000477!9.81e-07!154;UBERON:0000949!9.83e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.08e-11,41;UBERON:0004177,1.39e-11,29;UBERON:0005057,1.39e-11,29;UBERON:0001004,5.93e-11,42;UBERON:0002370,7.58e-11,23;UBERON:0000974,7.58e-11,23;UBERON:0004807,7.58e-11,23;UBERON:0005058,7.58e-11,23;UBERON:0003351,7.58e-11,23;UBERON:0009113,7.58e-11,23;UBERON:0003295,7.58e-11,23;UBERON:0009722,7.58e-11,23;UBERON:0005562,7.58e-11,23;UBERON:0007690,7.58e-11,23;UBERON:0006562,7.61e-10,24;UBERON:0003408,7.61e-10,24;UBERON:0001557,7.61e-10,24;UBERON:0001042,7.61e-10,24;UBERON:0008814,7.61e-10,24;UBERON:0009145,7.61e-10,24;UBERON:0003081,1.77e-09,87;UBERON:0000077,4.96e-09,35;UBERON:0002390,6.75e-09,45;UBERON:0003061,6.75e-09,45;UBERON:0002193,1.06e-08,48;UBERON:0002405,1.06e-08,48;UBERON:0002368,2.48e-08,60;UBERON:0005911,3.42e-08,69;UBERON:0001041,1.22e-07,80;UBERON:0000072,2.20e-07,27;UBERON:0000949,2.39e-07,72;UBERON:0002530,4.23e-07,65 | |||
|phase1_expression=1.44133962394315,1.74487703819681,0.909998478779072,0.90739263392049,0.500895729946347,1.17515490338323,1.16806320297763,16.2695387536386,17.73937899111,16.3845168425395,14.2110913627169,10.4501528283891,7.70403284690426,10.6652890951177,0.666219523631325,1.61980213911861,1.39912375625629,6.46697438984387,6.30726394586398,5.94145512517242,2.8064285749853,0.198581902401771,0,0.639969691173627,1.60586496747019,0.57423196411502,1.29228598847722,1.72376986148711,0.760093677825496,0.756090389279792,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,2.01434908760924,3.24406179902447,2.56965453026354,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0,0,4.86569557567435,5.80289713609076,5.04140698713696,0,1.14613375975503,1.54701627683233,0.606949382578793,0.528990979272033,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,0.725827286159344,0.945041568321835,0.841299845405528,0.285650984403804,1.76694832761291,4.16468717330844,4.98396449294829,5.51531271966013,0,0.127687338085188,0.307213066512487,0.923204014111357,1.09785172322892,0,0.558365998002762,1.12552522006336,0.30559649555362,0.589257170947335,0.569486723196412,0.745597783301202,0.530083353332288,0.151143120213571,4.05810284182349,8.60423876981386,0.679971333707751,0,1.29955283489534,0,1.12355536105401,0.511290967734173,0.519572009205738,0.70667914902068,0.14084341977668,0,2.54805239706646,0,0,0,0,1.02765491747154,6.47344709117929,2.9688427812965,3.46970653532272,1.21786191324856,2.07553947530453,3.16517545160507,2.3517741427141,2.01066546127481,0.988779870937496,2.31358971071859,3.5384422077995,1.29413479957927,0.662524555381181,1.45462575940567,1.86391761218122,1.75668478206928,0.83778682725382,1.27728527604296,4.07371423320129,1.19980546198682,3.04968544975355,0.898743836428936,23.7900313465686,26.1361052394758,3.47648640384553,3.83573185995496,3.1168206683934,6.81413304884582,1.83310854930569,1.61729061793121,0.252722758433675,0.841767423545896,0.650602214813519,1.14951052216736,1.0803727788321,0.60281927134286,0.544291993210623,0.640568601424249,0.843315521037559,0.517406741478031,1.07783996466421,0.567318240503458,0.879755620819744,1.09597866213787,0.834141747676794,2.43776516565517,0.411564272815887,0.995171334092466,2.1066395619397,1.80143534980301,1.98914449576915,2.07125772535502,1.40715635988658,3.6012412292203,2.84093682702252,2.36117078096885,2.46827380619805,4.41814495025775,2.68273401399619,3.85325629811659,2.79751744852917,4.92502392237286,5.99909190639332,5.55559952216263,6.14740322814942,7.38135303182045,0,0.823236899034275,1.98251269790279,0.793351699990633,0.426576501070468,1.85789337488351,1.28867461322093,1.61346819698674,0.444756087689741,2.66315876557583,0,0.658795818896044,2.01068167040216,2.78539060857611,1.55971269695296,0.898819408654221,0.432276099749388,0.597423819763102,3.98302592001472,2.28497025219458,1.1270773567308,1.62921062276251,2.90928730751439,1.61312385747733,2.40298841072178,4.13308414342886,2.35498091762062,2.46794327843601,1.77871576252289,1.66845105716094,1.96558995113203,1.12431056192427,1.62288097110802,2.41177159752417,2.29163266603278,1.72617682470486,2.2698931748505,2.47105271869273,0,1.86070473834252,2.18426371180192,1.01031551178845,1.61457672169721,2.41221760681684,4.0645701836653,2.08440552947533,2.28150967018836,3.39490171550376,2.34690248288502,4.02015017860358,4.52282917683426,4.48807390072937,3.78324345854858,3.32197034473162,3.6674596791222,3.11340297959902,5.35323443784276,2.4590339958857,1.50791283939272,3.80733978673097,1.96705709207614,1.10374698521893,1.76605648986571,0.820481806145422,0,1.76729649043061,2.2085575359138,6.63745865304285,1.72338718186239,6.93009514062401,5.12436950389506,3.96307143104365,1.61924280669958,4.38383786866968,3.16230222357219,2.89189184779626,0.567760340833074,2.84904965867608,1.95464351224291,1.97964147567043,2.65490276679926,2.91336763385978,0,0.754420319023592,2.06711325016541,2.15204603560749,1.80899805217755,2.18120237686503,1.42598951353889,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,1.26042765821917,2.06973894052407,1.92903331528433,1.77340233642274,0.713475270408282,2.13913726782757,3.34911444026059,1.17335854031855,1.69465656691056,0.441056796109924,0.49465875882444,0.322928853391811,0.784068024066026,1.43246812803764,0.492422699235184,2.62332752966866,0.741701208042039,5.12612642393558,1.65109494370578,1.85194527369712,2.44878994106098,2.46049609897845,3.20289442489132,10.3686842296252,12.4556792568056,16.307596908922,0,0.790839983952838,0.813277868507395,0.756037385752609,1.25452977608681,0.655087691238533,0.809186078308924,1.65306911450672,1.30877970992015,1.68499465279331,0.621339313086926,0.56369293868419,0.448549638131936,0.330916980914195,1.16670713006429,1.03327858782185,0,0.821500670520278,0.911430693907651,0.524296722128554,0.483168241652012,0.288030006257865,6.32022241256356,4.66267995167378,4.72470402958205,4.67714962720062,4.833720783022,7.15252877212554,6.25016337503838,4.28299628806274,4.4425237977185,8.07792150542998,6.04957110821043,7.89408833991995,6.15755786498109,8.99952146798081,0.680191150845634,0,0.358855426437903,0,0.772758376128762,3.37828455812128,0.73260649706906,0,1.00314420807073,2.25900737046827,0,0.572895513439397,0.343706364687375,0.685082519770642,1.5107877947794,0.675022500231806,2.2516060161211,0.453142408984205,0.51776031175182,0.415149390336707,0.399024873401031,1.19513524027894,1.45864030240976,0.419226325255965,0.919217542250071,0.666740183404846,1.44224540067226,2.24643446714271,2.77966932940177,2.02783439912192,2.07488975524684,1.87283014939765,2.30490548657529,1.66562859971278,1.90517476513229,1.39061191133827,1.35036454324594,1.64834360321323,2.06078488188156,0.685738504770831,1.59728225543404,3.09967046931517,1.74415699958794,1.78807822789128,1.18460451048347,2.19513567447327,1.05227884575137,1.62964936615034,1.12228454331548,1.66089025373844,2.36410757701352,3.6830793885272,1.54936841185966,1.35034627686799,2.24829520144151,2.33931608445408,1.28922632428979,1.72159498861959,2.8676884485537,3.2461496986859 | |phase1_expression=1.44133962394315,1.74487703819681,0.909998478779072,0.90739263392049,0.500895729946347,1.17515490338323,1.16806320297763,16.2695387536386,17.73937899111,16.3845168425395,14.2110913627169,10.4501528283891,7.70403284690426,10.6652890951177,0.666219523631325,1.61980213911861,1.39912375625629,6.46697438984387,6.30726394586398,5.94145512517242,2.8064285749853,0.198581902401771,0,0.639969691173627,1.60586496747019,0.57423196411502,1.29228598847722,1.72376986148711,0.760093677825496,0.756090389279792,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,2.01434908760924,3.24406179902447,2.56965453026354,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0,0,4.86569557567435,5.80289713609076,5.04140698713696,0,1.14613375975503,1.54701627683233,0.606949382578793,0.528990979272033,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,0.725827286159344,0.945041568321835,0.841299845405528,0.285650984403804,1.76694832761291,4.16468717330844,4.98396449294829,5.51531271966013,0,0.127687338085188,0.307213066512487,0.923204014111357,1.09785172322892,0,0.558365998002762,1.12552522006336,0.30559649555362,0.589257170947335,0.569486723196412,0.745597783301202,0.530083353332288,0.151143120213571,4.05810284182349,8.60423876981386,0.679971333707751,0,1.29955283489534,0,1.12355536105401,0.511290967734173,0.519572009205738,0.70667914902068,0.14084341977668,0,2.54805239706646,0,0,0,0,1.02765491747154,6.47344709117929,2.9688427812965,3.46970653532272,1.21786191324856,2.07553947530453,3.16517545160507,2.3517741427141,2.01066546127481,0.988779870937496,2.31358971071859,3.5384422077995,1.29413479957927,0.662524555381181,1.45462575940567,1.86391761218122,1.75668478206928,0.83778682725382,1.27728527604296,4.07371423320129,1.19980546198682,3.04968544975355,0.898743836428936,23.7900313465686,26.1361052394758,3.47648640384553,3.83573185995496,3.1168206683934,6.81413304884582,1.83310854930569,1.61729061793121,0.252722758433675,0.841767423545896,0.650602214813519,1.14951052216736,1.0803727788321,0.60281927134286,0.544291993210623,0.640568601424249,0.843315521037559,0.517406741478031,1.07783996466421,0.567318240503458,0.879755620819744,1.09597866213787,0.834141747676794,2.43776516565517,0.411564272815887,0.995171334092466,2.1066395619397,1.80143534980301,1.98914449576915,2.07125772535502,1.40715635988658,3.6012412292203,2.84093682702252,2.36117078096885,2.46827380619805,4.41814495025775,2.68273401399619,3.85325629811659,2.79751744852917,4.92502392237286,5.99909190639332,5.55559952216263,6.14740322814942,7.38135303182045,0,0.823236899034275,1.98251269790279,0.793351699990633,0.426576501070468,1.85789337488351,1.28867461322093,1.61346819698674,0.444756087689741,2.66315876557583,0,0.658795818896044,2.01068167040216,2.78539060857611,1.55971269695296,0.898819408654221,0.432276099749388,0.597423819763102,3.98302592001472,2.28497025219458,1.1270773567308,1.62921062276251,2.90928730751439,1.61312385747733,2.40298841072178,4.13308414342886,2.35498091762062,2.46794327843601,1.77871576252289,1.66845105716094,1.96558995113203,1.12431056192427,1.62288097110802,2.41177159752417,2.29163266603278,1.72617682470486,2.2698931748505,2.47105271869273,0,1.86070473834252,2.18426371180192,1.01031551178845,1.61457672169721,2.41221760681684,4.0645701836653,2.08440552947533,2.28150967018836,3.39490171550376,2.34690248288502,4.02015017860358,4.52282917683426,4.48807390072937,3.78324345854858,3.32197034473162,3.6674596791222,3.11340297959902,5.35323443784276,2.4590339958857,1.50791283939272,3.80733978673097,1.96705709207614,1.10374698521893,1.76605648986571,0.820481806145422,0,1.76729649043061,2.2085575359138,6.63745865304285,1.72338718186239,6.93009514062401,5.12436950389506,3.96307143104365,1.61924280669958,4.38383786866968,3.16230222357219,2.89189184779626,0.567760340833074,2.84904965867608,1.95464351224291,1.97964147567043,2.65490276679926,2.91336763385978,0,0.754420319023592,2.06711325016541,2.15204603560749,1.80899805217755,2.18120237686503,1.42598951353889,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,1.26042765821917,2.06973894052407,1.92903331528433,1.77340233642274,0.713475270408282,2.13913726782757,3.34911444026059,1.17335854031855,1.69465656691056,0.441056796109924,0.49465875882444,0.322928853391811,0.784068024066026,1.43246812803764,0.492422699235184,2.62332752966866,0.741701208042039,5.12612642393558,1.65109494370578,1.85194527369712,2.44878994106098,2.46049609897845,3.20289442489132,10.3686842296252,12.4556792568056,16.307596908922,0,0.790839983952838,0.813277868507395,0.756037385752609,1.25452977608681,0.655087691238533,0.809186078308924,1.65306911450672,1.30877970992015,1.68499465279331,0.621339313086926,0.56369293868419,0.448549638131936,0.330916980914195,1.16670713006429,1.03327858782185,0,0.821500670520278,0.911430693907651,0.524296722128554,0.483168241652012,0.288030006257865,6.32022241256356,4.66267995167378,4.72470402958205,4.67714962720062,4.833720783022,7.15252877212554,6.25016337503838,4.28299628806274,4.4425237977185,8.07792150542998,6.04957110821043,7.89408833991995,6.15755786498109,8.99952146798081,0.680191150845634,0,0.358855426437903,0,0.772758376128762,3.37828455812128,0.73260649706906,0,1.00314420807073,2.25900737046827,0,0.572895513439397,0.343706364687375,0.685082519770642,1.5107877947794,0.675022500231806,2.2516060161211,0.453142408984205,0.51776031175182,0.415149390336707,0.399024873401031,1.19513524027894,1.45864030240976,0.419226325255965,0.919217542250071,0.666740183404846,1.44224540067226,2.24643446714271,2.77966932940177,2.02783439912192,2.07488975524684,1.87283014939765,2.30490548657529,1.66562859971278,1.90517476513229,1.39061191133827,1.35036454324594,1.64834360321323,2.06078488188156,0.685738504770831,1.59728225543404,3.09967046931517,1.74415699958794,1.78807822789128,1.18460451048347,2.19513567447327,1.05227884575137,1.62964936615034,1.12228454331548,1.66089025373844,2.36410757701352,3.6830793885272,1.54936841185966,1.35034627686799,2.24829520144151,2.33931608445408,1.28922632428979,1.72159498861959,2.8676884485537,3.2461496986859 | ||
|short_description=p1@Adora2a | |short_description=p1@Adora2a | ||
}} | }} |
Latest revision as of 06:53, 26 September 2015
Short description: | p1@Adora2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adora2a_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENSMUST00000105420, NM_009630, uc007fqh.1_5end |
EntrezGene: | Adora2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.63e-07 | 9 |
alpha-beta T cell | 2.63e-07 | 9 |
immature T cell | 2.63e-07 | 9 |
mature T cell | 2.63e-07 | 9 |
immature alpha-beta T cell | 2.63e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.08e-11 | 41 |
hemopoietic organ | 1.39e-11 | 29 |
immune organ | 1.39e-11 | 29 |
respiratory system | 5.93e-11 | 42 |
thymus | 7.58e-11 | 23 |
neck | 7.58e-11 | 23 |
respiratory system epithelium | 7.58e-11 | 23 |
hemolymphoid system gland | 7.58e-11 | 23 |
pharyngeal epithelium | 7.58e-11 | 23 |
thymic region | 7.58e-11 | 23 |
pharyngeal gland | 7.58e-11 | 23 |
entire pharyngeal arch endoderm | 7.58e-11 | 23 |
thymus primordium | 7.58e-11 | 23 |
early pharyngeal endoderm | 7.58e-11 | 23 |
pharynx | 7.61e-10 | 24 |
gland of gut | 7.61e-10 | 24 |
upper respiratory tract | 7.61e-10 | 24 |
chordate pharynx | 7.61e-10 | 24 |
pharyngeal arch system | 7.61e-10 | 24 |
pharyngeal region of foregut | 7.61e-10 | 24 |
lateral plate mesoderm | 1.77e-09 | 87 |
mixed endoderm/mesoderm-derived structure | 4.96e-09 | 35 |
hematopoietic system | 6.75e-09 | 45 |
blood island | 6.75e-09 | 45 |
hemolymphoid system | 1.06e-08 | 48 |
immune system | 1.06e-08 | 48 |
endocrine gland | 2.48e-08 | 60 |
endo-epithelium | 3.42e-08 | 69 |
foregut | 1.22e-07 | 80 |
segment of respiratory tract | 2.20e-07 | 27 |
endocrine system | 2.39e-07 | 72 |
gland | 4.23e-07 | 65 |