FFCP PHASE1:Mm9::chr14:20796354..20796372,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14702 | |EntrezGene=14702 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=P63213 | |UniProt=P63213 | ||
|association_with_transcript=21bp_to_ENSMUST00000055100_5end | |association_with_transcript=21bp_to_ENSMUST00000055100_5end | ||
|cluster_id=chr14:20796354..20796372,- | |||
|description=CAGE_peak_5_at_Gng2_5end | |description=CAGE_peak_5_at_Gng2_5end | ||
|id=chr14:20796354..20796372,- | |id=chr14:20796354..20796372,- | ||
|ontology_enrichment_celltype=CL:0000117!8.50e-15!23;CL:0000337!8.50e-15!23;CL:0000540!1.99e-08!33;CL:0000047!1.99e-08!33;CL:0000031!1.99e-08!33;CL:0000404!1.99e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-22,23;CL:0000337,1.24e-22,23;CL:0000540,3.78e-14,33;CL:0000047,3.78e-14,33;CL:0000031,3.78e-14,33;CL:0000404,3.78e-14,33;CL:0002609,1.74e-11,6;CL:0000393,3.52e-11,39;CL:0000211,3.52e-11,39;CL:0002319,1.13e-09,43;CL:0000221,2.42e-09,44;CL:0000133,2.42e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.32e-13!52;UBERON:0005068!3.32e-13!52;UBERON:0006241!3.32e-13!52;UBERON:0007135!3.32e-13!52;UBERON:0002020!1.62e-12!34;UBERON:0003056!1.83e-12!49;UBERON:0002346!9.19e-12!71;UBERON:0003075!9.19e-12!71;UBERON:0007284!9.19e-12!71;UBERON:0003080!1.08e-11!40;UBERON:0002780!2.91e-11!39;UBERON:0001890!2.91e-11!39;UBERON:0006240!2.91e-11!39;UBERON:0000073!3.48e-10!75;UBERON:0001016!3.48e-10!75;UBERON:0001017!4.29e-10!73;UBERON:0005743!4.29e-10!73;UBERON:0002616!5.41e-10!49;UBERON:0000033!1.09e-09!63;UBERON:0000955!1.66e-09!50;UBERON:0006238!1.66e-09!50;UBERON:0002791!3.07e-09!29;UBERON:0003528!3.07e-09!29;UBERON:0001893!3.07e-09!29;UBERON:0004121!1.35e-08!102;UBERON:0000924!1.35e-08!102;UBERON:0006601!1.35e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.04e-16,34;UBERON:0003528,1.15e-10,29;UBERON:0002791,1.15e-10,29;UBERON:0001893,1.15e-10,29;UBERON:0000073,2.33e-09,54;UBERON:0001948,3.03e-09,5;UBERON:0002315,3.03e-09,5;UBERON:0001049,5.51e-09,52;UBERON:0005068,5.51e-09,52;UBERON:0006241,5.51e-09,52;UBERON:0007135,5.51e-09,52;UBERON:0001017,3.54e-08,73;UBERON:0000956,5.42e-08,21;UBERON:0001869,5.42e-08,21;UBERON:0000203,5.42e-08,21;UBERON:0001016,8.59e-08,75;UBERON:0002240,1.33e-07,6;UBERON:0005174,1.33e-07,6;UBERON:0001137,1.33e-07,6;UBERON:0002346,4.74e-07,64;UBERON:0003075,4.74e-07,64;UBERON:0007284,4.74e-07,64;UBERON:0002780,6.21e-07,39;UBERON:0001890,6.21e-07,39;UBERON:0006240,6.21e-07,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,9.3065571995415,11.6378015439847,19.6487735086916,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,9.7468235569969,13.095576018174,9.25429829946081,3.42781181284564,2.87129103237098,10.656699531701,9.29701068876893,17.4651569455904,0,0.510749352340751,1.0752457327937,12.7929699098288,13.5401712531566,8.33461392890816,0.837548997004143,0.56276261003168,0.763991238884051,5.59794312399969,6.12198227436143,11.183966749518,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.898743836428936,0,12.4397808591736,0.347648640384553,1.02286182932132,0.62336413367868,0.811206315338788,0,0,0,0,0.130120442962704,0.459804208866946,1.0803727788321,0.30140963567143,0.544291993210623,0.512454881139399,0.843315521037559,0,0.431135985865684,0,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,21.4041593748912,0,0,0,0.464473343720877,0.515469845288373,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.664394068946325,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,0.741701208042039,0.170870880797853,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0,0.15241361331,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.89038500578056,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0.726511433089237,0.798049746802062,0.853668028770671,1.70174701947806,2.93458427679175,2.38996560985018,2.22246727801615,1.23621034343337,1.92551525755089,2.27427490587418,1.77435509923168,2.07488975524684,1.49826411951812,1.40855335290712,1.66562859971278,1.42888107384922,1.39061191133827,1.15745532278223,0.412085900803307,1.32479028120958,2.40008476669791,1.77475806159337,2.14592570952589,1.30811774969096,2.07040636913727,1.52306294205018,1.28049581010941,2.36762740294059,1.90125759384206,2.24456908663095,1.54225523561426,1.37906275325789,0.818462086339379,1.70430525304563,0.578719832943424,2.99772693525535,2.10538447600868,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,9.3065571995415,11.6378015439847,19.6487735086916,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,9.7468235569969,13.095576018174,9.25429829946081,3.42781181284564,2.87129103237098,10.656699531701,9.29701068876893,17.4651569455904,0,0.510749352340751,1.0752457327937,12.7929699098288,13.5401712531566,8.33461392890816,0.837548997004143,0.56276261003168,0.763991238884051,5.59794312399969,6.12198227436143,11.183966749518,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.898743836428936,0,12.4397808591736,0.347648640384553,1.02286182932132,0.62336413367868,0.811206315338788,0,0,0,0,0.130120442962704,0.459804208866946,1.0803727788321,0.30140963567143,0.544291993210623,0.512454881139399,0.843315521037559,0,0.431135985865684,0,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,21.4041593748912,0,0,0,0.464473343720877,0.515469845288373,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.664394068946325,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,0.741701208042039,0.170870880797853,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0,0.15241361331,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.89038500578056,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0.726511433089237,0.798049746802062,0.853668028770671,1.70174701947806,2.93458427679175,2.38996560985018,2.22246727801615,1.23621034343337,1.92551525755089,2.27427490587418,1.77435509923168,2.07488975524684,1.49826411951812,1.40855335290712,1.66562859971278,1.42888107384922,1.39061191133827,1.15745532278223,0.412085900803307,1.32479028120958,2.40008476669791,1.77475806159337,2.14592570952589,1.30811774969096,2.07040636913727,1.52306294205018,1.28049581010941,2.36762740294059,1.90125759384206,2.24456908663095,1.54225523561426,1.37906275325789,0.818462086339379,1.70430525304563,0.578719832943424,2.99772693525535,2.10538447600868,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p5@Gng2 | |short_description=p5@Gng2 | ||
}} | }} |
Latest revision as of 18:25, 25 September 2015
Short description: | p5@Gng2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gng2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 21bp_to_ENSMUST00000055100_5end |
EntrezGene: | Gng2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-22 | 23 |
neuron | 3.78e-14 | 33 |
neuronal stem cell | 3.78e-14 | 33 |
neuroblast | 3.78e-14 | 33 |
electrically signaling cell | 3.78e-14 | 33 |
neuron of cerebral cortex | 1.74e-11 | 6 |
electrically responsive cell | 3.52e-11 | 39 |
electrically active cell | 3.52e-11 | 39 |
neural cell | 1.13e-09 | 43 |
ectodermal cell | 2.42e-09 | 44 |
neurectodermal cell | 2.42e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.04e-16 | 34 |
brain grey matter | 1.15e-10 | 29 |
regional part of telencephalon | 1.15e-10 | 29 |
telencephalon | 1.15e-10 | 29 |
regional part of nervous system | 2.33e-09 | 54 |
regional part of spinal cord | 3.03e-09 | 5 |
gray matter of spinal cord | 3.03e-09 | 5 |
neural tube | 5.51e-09 | 52 |
neural rod | 5.51e-09 | 52 |
future spinal cord | 5.51e-09 | 52 |
neural keel | 5.51e-09 | 52 |
central nervous system | 3.54e-08 | 73 |
cerebral cortex | 5.42e-08 | 21 |
cerebral hemisphere | 5.42e-08 | 21 |
pallium | 5.42e-08 | 21 |
nervous system | 8.59e-08 | 75 |
spinal cord | 1.33e-07 | 6 |
dorsal region element | 1.33e-07 | 6 |
dorsum | 1.33e-07 | 6 |
neurectoderm | 4.74e-07 | 64 |
neural plate | 4.74e-07 | 64 |
presumptive neural plate | 4.74e-07 | 64 |
regional part of forebrain | 6.21e-07 | 39 |
forebrain | 6.21e-07 | 39 |
future forebrain | 6.21e-07 | 39 |