FFCP PHASE1:Hg19::chr10:130835008..130835022,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:130835008..130835022,- | |||
|coexpression_cluster_id=C2989 | |||
|description=CAGE_peak_at_chr10:130835008..130835022,- | |description=CAGE_peak_at_chr10:130835008..130835022,- | ||
|id=chr10:130835008..130835022,- | |id=chr10:130835008..130835022,- | ||
|ontology_enrichment_celltype=CL:0000791!1.82e-33!18;CL:0000789!1.82e-33!18;CL:0002420!1.82e-33!18;CL:0002419!1.82e-33!18;CL:0000790!1.82e-33!18;CL:0000084!8.03e-23!25;CL:0000827!8.03e-23!25;CL:0000625!1.09e-21!11;CL:0000738!8.07e-21!140;CL:0000037!7.38e-19!172;CL:0000566!7.38e-19!172;CL:0000988!3.69e-17!182;CL:0002032!9.02e-15!165;CL:0000837!9.02e-15!165;CL:0000838!2.13e-14!52;CL:0000542!5.02e-14!53;CL:0000051!5.02e-14!53;CL:0002087!2.22e-12!119;CL:0002031!2.63e-12!124;CL:0000094!3.02e-11!8;CL:0000624!4.76e-11!6;CL:0000898!7.33e-09!3;CL:0000842!2.49e-08!3;CL:0000081!5.93e-08!11 | |ontology_enrichment_celltype=CL:0000791!1.82e-33!18;CL:0000789!1.82e-33!18;CL:0002420!1.82e-33!18;CL:0002419!1.82e-33!18;CL:0000790!1.82e-33!18;CL:0000084!8.03e-23!25;CL:0000827!8.03e-23!25;CL:0000625!1.09e-21!11;CL:0000738!8.07e-21!140;CL:0000037!7.38e-19!172;CL:0000566!7.38e-19!172;CL:0000988!3.69e-17!182;CL:0002032!9.02e-15!165;CL:0000837!9.02e-15!165;CL:0000838!2.13e-14!52;CL:0000542!5.02e-14!53;CL:0000051!5.02e-14!53;CL:0002087!2.22e-12!119;CL:0002031!2.63e-12!124;CL:0000094!3.02e-11!8;CL:0000624!4.76e-11!6;CL:0000898!7.33e-09!3;CL:0000842!2.49e-08!3;CL:0000081!5.93e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.45e-31;18!CL:0000789;7.45e-31;18!CL:0002419;7.45e-31;18!CL:0000084;9.95e-22;25!CL:0000625;1.71e-18;11!CL:0000815;1.99e-13;2!CL:0000792;1.99e-13;2!CL:0002677;1.99e-13;2!CL:0000771;8.77e-13;2!CL:0000094;5.01e-12;8!CL:0000624;1.24e-09;6!CL:0000898;3.08e-09;3!CL:0000081;8.86e-09;11!CL:0002127;2.59e-07;1!CL:0000911;2.59e-07;1!CL:0000814;2.59e-07;1!CL:0000542;2.71e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.60e-31,18;CL:0000789,4.60e-31,18;CL:0002420,4.60e-31,18;CL:0002419,4.60e-31,18;CL:0000790,4.60e-31,18;CL:0000084,7.08e-22,25;CL:0000827,7.08e-22,25;CL:0000625,1.14e-18,11;CL:0000815,2.00e-13,2;CL:0000792,2.00e-13,2;CL:0002677,2.00e-13,2;CL:0000771,9.05e-13,2;CL:0000094,4.67e-12,8;CL:0000838,1.23e-11,52;CL:0000542,2.22e-11,53;CL:0000051,2.22e-11,53;CL:0000624,1.12e-09,6;CL:0000898,3.08e-09,3;CL:0000081,8.43e-09,11;CL:0000738,1.20e-07,136;CL:0002127,2.84e-07,1;CL:0000914,2.84e-07,1;CL:0000911,2.84e-07,1;CL:0000814,2.84e-07,1;CL:0002042,2.84e-07,1;CL:0002039,2.84e-07,1;CL:0002040,2.84e-07,1;CL:0002041,2.84e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;7.45e-31;18!CL:0000051;2.71e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.82e-24!15;UBERON:0000179!6.82e-24!15;UBERON:0000463!6.82e-24!15;UBERON:0002390!2.92e-12!102;UBERON:0003061!2.92e-12!102;UBERON:0002193!1.74e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-38;15!UBERON:0000179;1.21e-38;15!UBERON:0000463;1.21e-38;15!UBERON:0002390;5.26e-16;32!UBERON:0002193;5.86e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.71e-38,15;UBERON:0000179,1.71e-38,15;UBERON:0000463,1.71e-38,15 | |||
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| ||
|short_description=p@chr10:130835008..130835022,- | |short_description=p@chr10:130835008..130835022,- | ||
}} | }} |
Latest revision as of 11:40, 23 July 2015
Short description: | p@chr10:130835008..130835022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:130835008..130835022, - |
Coexpression cluster: | C2989_CD4_Whole_blood_Neutrophils_Eosinophils_Endothelial_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.60e-31 | 18 |
alpha-beta T cell | 4.60e-31 | 18 |
immature T cell | 4.60e-31 | 18 |
mature T cell | 4.60e-31 | 18 |
immature alpha-beta T cell | 4.60e-31 | 18 |
T cell | 7.08e-22 | 25 |
pro-T cell | 7.08e-22 | 25 |
CD8-positive, alpha-beta T cell | 1.14e-18 | 11 |
regulatory T cell | 2.00e-13 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.00e-13 | 2 |
naive regulatory T cell | 2.00e-13 | 2 |
eosinophil | 9.05e-13 | 2 |
granulocyte | 4.67e-12 | 8 |
lymphoid lineage restricted progenitor cell | 1.23e-11 | 52 |
lymphocyte | 2.22e-11 | 53 |
common lymphoid progenitor | 2.22e-11 | 53 |
CD4-positive, alpha-beta T cell | 1.12e-09 | 6 |
naive T cell | 3.08e-09 | 3 |
blood cell | 8.43e-09 | 11 |
leukocyte | 1.20e-07 | 136 |
innate effector T cell | 2.84e-07 | 1 |
immature NK T cell | 2.84e-07 | 1 |
effector T cell | 2.84e-07 | 1 |
mature NK T cell | 2.84e-07 | 1 |
immature NK T cell stage IV | 2.84e-07 | 1 |
immature NK T cell stage I | 2.84e-07 | 1 |
immature NK T cell stage II | 2.84e-07 | 1 |
immature NK T cell stage III | 2.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 1.71e-38 | 15 |
haemolymphatic fluid | 1.71e-38 | 15 |
organism substance | 1.71e-38 | 15 |