FFCP PHASE1:Hg19::chr10:30829259..30829287,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30829259..30829287,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:30829259..30829287,- | |description=CAGE_peak_at_chr10:30829259..30829287,- | ||
|id=chr10:30829259..30829287,- | |id=chr10:30829259..30829287,- | ||
|ontology_enrichment_celltype=CL:0002057!1.32e-106!42;CL:0000860!4.33e-99!45;CL:0002194!1.46e-72!63;CL:0000576!1.46e-72!63;CL:0000040!1.46e-72!63;CL:0000559!1.46e-72!63;CL:0002009!3.59e-70!65;CL:0000839!8.72e-65!70;CL:0000557!8.47e-64!71;CL:0000766!2.86e-63!76;CL:0002087!1.15e-46!119;CL:0000738!3.37e-41!140;CL:0000763!4.67e-41!112;CL:0000049!4.67e-41!112;CL:0002031!4.48e-39!124;CL:0000037!2.56e-32!172;CL:0000566!2.56e-32!172;CL:0000988!3.53e-30!182;CL:0002032!9.54e-30!165;CL:0000837!9.54e-30!165;CL:0000134!6.20e-13!358;CL:0002320!1.50e-12!365;CL:0000219!3.42e-11!390;CL:0000034!7.02e-10!444;CL:0000048!1.45e-09!430;CL:0000723!2.47e-09!436;CL:0000842!1.11e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.32e-106!42;CL:0000860!4.33e-99!45;CL:0002194!1.46e-72!63;CL:0000576!1.46e-72!63;CL:0000040!1.46e-72!63;CL:0000559!1.46e-72!63;CL:0002009!3.59e-70!65;CL:0000839!8.72e-65!70;CL:0000557!8.47e-64!71;CL:0000766!2.86e-63!76;CL:0002087!1.15e-46!119;CL:0000738!3.37e-41!140;CL:0000763!4.67e-41!112;CL:0000049!4.67e-41!112;CL:0002031!4.48e-39!124;CL:0000037!2.56e-32!172;CL:0000566!2.56e-32!172;CL:0000988!3.53e-30!182;CL:0002032!9.54e-30!165;CL:0000837!9.54e-30!165;CL:0000134!6.20e-13!358;CL:0002320!1.50e-12!365;CL:0000219!3.42e-11!390;CL:0000034!7.02e-10!444;CL:0000048!1.45e-09!430;CL:0000723!2.47e-09!436;CL:0000842!1.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.83e-92;33!CL:0002057;3.83e-92;33!CL:0000473;4.25e-62;39!CL:0000234;4.25e-62;39!CL:0000576;6.74e-54;48!CL:0000766;4.20e-31;69!CL:0002087;2.55e-17;104!CL:0000763;7.77e-16;100!CL:0002393;2.72e-13;6!CL:0002397;2.72e-13;6!CL:0000738;1.99e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-105,42;CL:0002057,1.04e-105,42;CL:0000473,3.92e-92,48;CL:0000234,3.92e-92,48;CL:0002194,4.05e-73,59;CL:0000576,4.05e-73,59;CL:0000040,4.05e-73,59;CL:0000559,4.05e-73,59;CL:0002009,1.15e-70,61;CL:0000839,3.62e-65,66;CL:0000557,3.64e-64,67;CL:0000766,1.45e-59,72;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002087,2.42e-36,115;CL:0002031,1.04e-34,120;CL:0000738,2.76e-30,136;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0002393,4.91e-09,9;CL:0002397,4.91e-09,9;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.01e-74;42!CL:0000049;9.92e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.24e-56!80;UBERON:0001474!1.05e-51!86;UBERON:0002390!6.74e-49!102;UBERON:0003061!6.74e-49!102;UBERON:0002193!5.45e-44!112;UBERON:0004765!3.64e-43!101;UBERON:0001434!3.64e-43!101;UBERON:0002405!3.49e-37!115;UBERON:0002204!1.11e-23!167;UBERON:0003081!1.02e-19!216;UBERON:0002384!5.04e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-56,76;UBERON:0001474,5.06e-52,82;UBERON:0004765,3.52e-47,90;UBERON:0002405,1.41e-45,93;UBERON:0002390,4.06e-43,98;UBERON:0003061,4.06e-43,98;UBERON:0001434,3.34e-42,100;UBERON:0002193,7.07e-39,108;UBERON:0002204,4.20e-24,167;UBERON:0003081,2.86e-19,203;UBERON:0000926,3.11e-11,315;UBERON:0004120,3.11e-11,315;UBERON:0006603,3.11e-11,315;UBERON:0002384,5.20e-09,371 | |||
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|short_description=p@chr10:30829259..30829287,- | |short_description=p@chr10:30829259..30829287,- | ||
}} | }} |
Latest revision as of 13:08, 23 July 2015
Short description: | p@chr10:30829259..30829287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30829259..30829287, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-105 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-105 | 42 |
defensive cell | 3.92e-92 | 48 |
phagocyte | 3.92e-92 | 48 |
monopoietic cell | 4.05e-73 | 59 |
monocyte | 4.05e-73 | 59 |
monoblast | 4.05e-73 | 59 |
promonocyte | 4.05e-73 | 59 |
macrophage dendritic cell progenitor | 1.15e-70 | 61 |
myeloid lineage restricted progenitor cell | 3.62e-65 | 66 |
granulocyte monocyte progenitor cell | 3.64e-64 | 67 |
myeloid leukocyte | 1.45e-59 | 72 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
nongranular leukocyte | 2.42e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-34 | 120 |
leukocyte | 2.76e-30 | 136 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
intermediate monocyte | 4.91e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.91e-09 | 9 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-56 | 76 |
bone element | 5.06e-52 | 82 |
skeletal element | 3.52e-47 | 90 |
immune system | 1.41e-45 | 93 |
hematopoietic system | 4.06e-43 | 98 |
blood island | 4.06e-43 | 98 |
skeletal system | 3.34e-42 | 100 |
hemolymphoid system | 7.07e-39 | 108 |
musculoskeletal system | 4.20e-24 | 167 |
lateral plate mesoderm | 2.86e-19 | 203 |
mesoderm | 3.11e-11 | 315 |
mesoderm-derived structure | 3.11e-11 | 315 |
presumptive mesoderm | 3.11e-11 | 315 |
connective tissue | 5.20e-09 | 371 |