FFCP PHASE1:Hg19::chr10:3894738..3894767,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3894738..3894767,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:3894738..3894767,+ | |description=CAGE_peak_at_chr10:3894738..3894767,+ | ||
|id=chr10:3894738..3894767,+ | |id=chr10:3894738..3894767,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.20e-49!42;CL:0000860!5.98e-45!45;CL:0000766!5.11e-38!76;CL:0000738!1.62e-32!140;CL:0000557!3.22e-32!71;CL:0002009!2.05e-31!65;CL:0000839!2.26e-31!70;CL:0002194!2.63e-31!63;CL:0000576!2.63e-31!63;CL:0000040!2.63e-31!63;CL:0000559!2.63e-31!63;CL:0002087!3.95e-25!119;CL:0002031!2.59e-24!124;CL:0000037!1.18e-22!172;CL:0000566!1.18e-22!172;CL:0000988!1.25e-22!182;CL:0000763!1.52e-22!112;CL:0000049!1.52e-22!112;CL:0002032!5.75e-20!165;CL:0000837!5.75e-20!165;CL:0002320!3.04e-13!365;CL:0000134!1.38e-12!358;CL:0002393!3.22e-12!9;CL:0002397!3.22e-12!9;CL:0000219!8.00e-11!390;CL:0000034!1.19e-09!444;CL:0000048!1.29e-09!430;CL:0000723!2.02e-09!436 | |ontology_enrichment_celltype=CL:0002057!2.20e-49!42;CL:0000860!5.98e-45!45;CL:0000766!5.11e-38!76;CL:0000738!1.62e-32!140;CL:0000557!3.22e-32!71;CL:0002009!2.05e-31!65;CL:0000839!2.26e-31!70;CL:0002194!2.63e-31!63;CL:0000576!2.63e-31!63;CL:0000040!2.63e-31!63;CL:0000559!2.63e-31!63;CL:0002087!3.95e-25!119;CL:0002031!2.59e-24!124;CL:0000037!1.18e-22!172;CL:0000566!1.18e-22!172;CL:0000988!1.25e-22!182;CL:0000763!1.52e-22!112;CL:0000049!1.52e-22!112;CL:0002032!5.75e-20!165;CL:0000837!5.75e-20!165;CL:0002320!3.04e-13!365;CL:0000134!1.38e-12!358;CL:0002393!3.22e-12!9;CL:0002397!3.22e-12!9;CL:0000219!8.00e-11!390;CL:0000034!1.19e-09!444;CL:0000048!1.29e-09!430;CL:0000723!2.02e-09!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-84;33!CL:0002057;1.52e-84;33!CL:0000576;2.44e-63;48!CL:0000473;1.06e-58;39!CL:0000234;1.06e-58;39!CL:0000766;9.11e-42;69!CL:0002393;2.96e-21;6!CL:0002397;2.96e-21;6!CL:0000763;8.57e-20;100!CL:0002087;7.68e-18;104!CL:0000738;1.29e-12;136!CL:0000767;5.41e-12;3!CL:0000094;2.44e-11;8!CL:0000623;2.65e-10;3!CL:0000988;2.34e-08;177!CL:0000081;3.90e-08;11!CL:0000771;4.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-117,42;CL:0002057,3.46e-117,42;CL:0000473,2.64e-101,48;CL:0000234,2.64e-101,48;CL:0000766,3.40e-91,72;CL:0002194,4.57e-79,59;CL:0000576,4.57e-79,59;CL:0000040,4.57e-79,59;CL:0000559,4.57e-79,59;CL:0000839,1.65e-77,66;CL:0000557,3.21e-76,67;CL:0002009,3.38e-76,61;CL:0000738,4.06e-60,136;CL:0000763,1.83e-57,108;CL:0000049,1.83e-57,108;CL:0002087,1.42e-52,115;CL:0002031,6.13e-50,120;CL:0000037,1.57e-46,168;CL:0000988,1.75e-45,177;CL:0002032,7.73e-45,161;CL:0000837,7.73e-45,161;CL:0002393,5.88e-24,9;CL:0002397,5.88e-24,9;CL:0000134,7.63e-19,354;CL:0002320,3.03e-18,361;CL:0000219,4.69e-17,386;CL:0000034,2.13e-14,441;CL:0000048,1.47e-13,427;CL:0000723,3.33e-13,433;CL:0000767,5.32e-12,3;CL:0000094,2.13e-11,8;CL:0000623,2.00e-10,3;CL:0000825,2.00e-10,3;CL:0000771,3.49e-08,2;CL:0000081,3.54e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-81;42!CL:0000049;1.49e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.21e-30!80;UBERON:0002390!2.91e-28!102;UBERON:0003061!2.91e-28!102;UBERON:0001474!3.19e-27!86;UBERON:0002193!4.78e-25!112;UBERON:0004765!2.21e-22!101;UBERON:0001434!2.21e-22!101;UBERON:0002405!2.98e-21!115;UBERON:0003081!1.53e-13!216;UBERON:0002384!1.59e-12!375;UBERON:0002204!2.07e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.06e-66,76;UBERON:0001474,1.34e-60,82;UBERON:0002390,1.36e-54,98;UBERON:0003061,1.36e-54,98;UBERON:0004765,2.24e-54,90;UBERON:0002405,2.58e-52,93;UBERON:0002193,1.28e-48,108;UBERON:0001434,5.55e-48,100;UBERON:0002204,8.37e-25,167;UBERON:0003081,1.24e-23,203;UBERON:0002384,1.98e-17,371;UBERON:0000926,1.63e-11,315;UBERON:0004120,1.63e-11,315;UBERON:0006603,1.63e-11,315 | |||
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| ||
|short_description=p@chr10:3894738..3894767,+ | |short_description=p@chr10:3894738..3894767,+ | ||
}} | }} |
Latest revision as of 13:37, 23 July 2015
Short description: | p@chr10:3894738..3894767, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3894738..3894767, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.06e-66 | 76 |
bone element | 1.34e-60 | 82 |
hematopoietic system | 1.36e-54 | 98 |
blood island | 1.36e-54 | 98 |
skeletal element | 2.24e-54 | 90 |
immune system | 2.58e-52 | 93 |
hemolymphoid system | 1.28e-48 | 108 |
skeletal system | 5.55e-48 | 100 |
musculoskeletal system | 8.37e-25 | 167 |
lateral plate mesoderm | 1.24e-23 | 203 |
connective tissue | 1.98e-17 | 371 |
mesoderm | 1.63e-11 | 315 |
mesoderm-derived structure | 1.63e-11 | 315 |
presumptive mesoderm | 1.63e-11 | 315 |