FFCP PHASE1:Mm9::chr13:28349459..28349469,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENSMUST00000171255_5end | |association_with_transcript=-26bp_to_ENSMUST00000171255_5end | ||
|cluster_id=chr13:28349459..28349469,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000171255_5end | |description=CAGE_peak_1_at_ENSMUST00000171255_5end | ||
|id=chr13:28349459..28349469,+ | |id=chr13:28349459..28349469,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.30e-21!66;CL:0002320!1.08e-14!46;CL:0000134!1.08e-14!46;CL:0000144!8.94e-14!121;CL:0000012!8.94e-14!121;CL:0000548!2.25e-13!115;CL:0000004!2.25e-13!115;CL:0000255!2.25e-13!115;CL:0002371!1.51e-12!118;CL:0000219!1.62e-12!54;CL:0000988!7.63e-12!32;CL:0002032!7.63e-12!32;CL:0000037!7.63e-12!32;CL:0000566!7.63e-12!32;CL:0000837!7.63e-12!32;CL:0002031!8.15e-11!25;CL:0000034!6.36e-10!97;CL:0000838!5.80e-09!12;CL:0000084!2.73e-08!11;CL:0000827!2.73e-08!11;CL:0000723!1.10e-07!91;CL:0000048!1.10e-07!91;CL:0000738!1.16e-07!17;CL:0002087!1.16e-07!17;CL:0000542!1.26e-07!13;CL:0000051!1.26e-07!13;CL:0000791!1.53e-07!9;CL:0000789!1.53e-07!9;CL:0002420!1.53e-07!9;CL:0002419!1.53e-07!9;CL:0000790!1.53e-07!9;CL:0000066!3.78e-07!25;CL:0000624!6.58e-07!8 | |ontology_enrichment_celltype=CL:0000063!1.30e-21!66;CL:0002320!1.08e-14!46;CL:0000134!1.08e-14!46;CL:0000144!8.94e-14!121;CL:0000012!8.94e-14!121;CL:0000548!2.25e-13!115;CL:0000004!2.25e-13!115;CL:0000255!2.25e-13!115;CL:0002371!1.51e-12!118;CL:0000219!1.62e-12!54;CL:0000988!7.63e-12!32;CL:0002032!7.63e-12!32;CL:0000037!7.63e-12!32;CL:0000566!7.63e-12!32;CL:0000837!7.63e-12!32;CL:0002031!8.15e-11!25;CL:0000034!6.36e-10!97;CL:0000838!5.80e-09!12;CL:0000084!2.73e-08!11;CL:0000827!2.73e-08!11;CL:0000723!1.10e-07!91;CL:0000048!1.10e-07!91;CL:0000738!1.16e-07!17;CL:0002087!1.16e-07!17;CL:0000542!1.26e-07!13;CL:0000051!1.26e-07!13;CL:0000791!1.53e-07!9;CL:0000789!1.53e-07!9;CL:0002420!1.53e-07!9;CL:0002419!1.53e-07!9;CL:0000790!1.53e-07!9;CL:0000066!3.78e-07!25;CL:0000624!6.58e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.54e-23,32;CL:0002032,1.54e-23,32;CL:0000037,1.54e-23,32;CL:0000837,1.54e-23,32;CL:0002320,8.88e-22,46;CL:0000134,8.88e-22,46;CL:0002031,6.92e-21,25;CL:0000219,4.05e-20,54;CL:0000034,1.36e-15,97;CL:0000838,5.26e-15,12;CL:0000791,5.89e-14,9;CL:0000789,5.89e-14,9;CL:0002420,5.89e-14,9;CL:0002419,5.89e-14,9;CL:0000790,5.89e-14,9;CL:0000084,1.25e-13,11;CL:0000827,1.25e-13,11;CL:0000542,1.38e-13,13;CL:0000051,1.38e-13,13;CL:0000738,2.34e-13,17;CL:0002087,2.34e-13,17;CL:0000624,1.19e-12,8;CL:0002076,2.13e-11,15;CL:0000723,2.13e-11,91;CL:0000048,2.13e-11,91;CL:0000049,2.61e-11,19;CL:0000066,3.50e-10,25;CL:0000893,6.01e-10,6;CL:0002489,6.01e-10,6;CL:0000898,6.01e-10,6;CL:0000809,6.01e-10,6;CL:0000810,6.01e-10,6;CL:0000895,6.01e-10,6;CL:0000808,6.01e-10,6;CL:0000894,6.01e-10,6;CL:0000806,6.01e-10,6;CL:0000807,6.01e-10,6;CL:0000805,6.01e-10,6;CL:0002425,6.01e-10,6;CL:0002436,6.01e-10,6;CL:0002427,6.01e-10,6;CL:0002428,6.01e-10,6;CL:0002429,6.01e-10,6;CL:0002433,6.01e-10,6;CL:0002431,6.01e-10,6;CL:0002432,6.01e-10,6;CL:0002563,2.93e-09,9;CL:0002251,2.93e-09,9;CL:0000223,3.41e-09,20;CL:0000763,8.51e-09,16;CL:0000839,7.59e-08,13;CL:0000050,1.14e-07,9;CL:0000239,8.62e-07,6;CL:0000677,8.62e-07,6;CL:0000584,8.62e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.08e-14!46;UBERON:0002193!6.34e-07!48;UBERON:0000344!8.06e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.88e-22,46;UBERON:0000344,1.72e-13,15;UBERON:0001242,4.70e-11,13;UBERON:0001262,4.70e-11,13;UBERON:0004786,4.70e-11,13;UBERON:0003350,2.93e-09,9;UBERON:0004808,2.93e-09,9;UBERON:0001277,2.93e-09,9;UBERON:0000485,3.02e-07,11;UBERON:0004923,4.19e-07,24 | |||
|phase1_expression=0.80074423552397,1.04692622291808,1.81999695755814,5.14189159221611,5.00895729946347,1.6787927191189,18.4553986070465,22.0800883085095,38.85768731386,51.2601312645166,41.7771842470232,20.3419005438108,35.0961496358972,21.4179985926544,0,14.9831697868471,29.3815988813822,31.0730232877864,25.7775135178789,21.2194825899015,0.17008658030214,0.695036658406197,24.0303806007821,21.5989770771099,19.7291981717766,1.14846392823004,3.01533397311352,2.58565479223067,14.251756459228,3.78045194639896,3.10422714917427,7.62036808151557,0,15.8481681015439,1.44425809875637,3.32469290716985,2.85837098767317,0.418531630736908,0,0,0,0,0,1.25896817975577,1.11514624341466,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,26.6774343631801,26.8383992544197,21.8460969442602,0.771778308107841,0.573066879877513,1.03134418455488,0.202316460859598,0.528990979272033,0,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0,0.207379224616955,0.405017814995072,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0.365950574409639,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,12.7220004799749,12.9227367782603,6.08715426273523,15.487629785665,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.511290967734173,33.2526085891672,26.1471285137652,0.845060518660083,10.2661181931454,0,0,17.3192832808971,14.6948721975557,8.08839112023653,0.45673551887624,0.258937883647172,0,0.346970653532272,0.913396434936424,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0,2.39630249011841,2.99951365496704,4.06624726633807,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0,0.520481771850815,0.229902104433473,0.360124259610698,0,0,0,0,0.517406741478031,0,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,2.80885274925294,5.91900186363845,0.284163499395593,0.207125772535502,0.469052119962192,0,0.23674473558521,0.590292695242212,0,0.465067889500816,0.536546802799238,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.210289948564127,0.514523061896422,0,0.264450566663544,0,0,0.38660238396628,1.00841762311671,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0,0.58489226135736,0,0,0.398282546508734,0.569003702859245,0.228497025219458,0,0.203651327845314,0.775809948670503,0.280543279561274,0,0.295220295959204,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,1.01850340712568,0.287696137450811,0.648540907100142,1.09824565275233,0,0.372140947668503,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.678980343100753,0.938760993154008,0.167506257441816,0,0,0,0.221464689648775,0,0.327726629431476,0,0.578596234326046,6.03165135757089,10.3342079925555,0,0.827810238914197,0,0,3.11476396215683,0,1.26203287766503,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,2.18502572539483,0.906970670894253,1.13163047853539,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0.356497378384721,0.632073515871632,2.10837217149998,0,0,0.720244376125241,0.776152102696527,0.428674070063185,0.532020700926821,0,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0.645857706783622,0.120625849856312,0.358117032009409,0.328281799490123,0,0,0.683483523191411,0.412773735926445,0.740778109478847,0.565105371014073,0.683471138605126,0.457556346413045,3.56954702987096,2.93898049879682,2.3493995546752,0,0,0,0.432021363287205,0.418176592028937,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.516639293910924,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0.649604114888975,0.179026695667481,0.39736270956253,0.480781798079875,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0,0,0.116876902181569,0.226730383615211,12.8751852956958,17.6736297520667,11.4161539127573,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0.572895513439397,1.54667864109319,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.760437899670719,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0,0.476872379894642,0,0.0941093804153306,0.507687647350059,0,0,0.543216455383447,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0 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|phase1_expression=0.80074423552397,1.04692622291808,1.81999695755814,5.14189159221611,5.00895729946347,1.6787927191189,18.4553986070465,22.0800883085095,38.85768731386,51.2601312645166,41.7771842470232,20.3419005438108,35.0961496358972,21.4179985926544,0,14.9831697868471,29.3815988813822,31.0730232877864,25.7775135178789,21.2194825899015,0.17008658030214,0.695036658406197,24.0303806007821,21.5989770771099,19.7291981717766,1.14846392823004,3.01533397311352,2.58565479223067,14.251756459228,3.78045194639896,3.10422714917427,7.62036808151557,0,15.8481681015439,1.44425809875637,3.32469290716985,2.85837098767317,0.418531630736908,0,0,0,0,0,1.25896817975577,1.11514624341466,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,26.6774343631801,26.8383992544197,21.8460969442602,0.771778308107841,0.573066879877513,1.03134418455488,0.202316460859598,0.528990979272033,0,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0,0.207379224616955,0.405017814995072,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0.365950574409639,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,12.7220004799749,12.9227367782603,6.08715426273523,15.487629785665,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.511290967734173,33.2526085891672,26.1471285137652,0.845060518660083,10.2661181931454,0,0,17.3192832808971,14.6948721975557,8.08839112023653,0.45673551887624,0.258937883647172,0,0.346970653532272,0.913396434936424,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0,2.39630249011841,2.99951365496704,4.06624726633807,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0,0.520481771850815,0.229902104433473,0.360124259610698,0,0,0,0,0.517406741478031,0,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,2.80885274925294,5.91900186363845,0.284163499395593,0.207125772535502,0.469052119962192,0,0.23674473558521,0.590292695242212,0,0.465067889500816,0.536546802799238,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.210289948564127,0.514523061896422,0,0.264450566663544,0,0,0.38660238396628,1.00841762311671,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0,0.58489226135736,0,0,0.398282546508734,0.569003702859245,0.228497025219458,0,0.203651327845314,0.775809948670503,0.280543279561274,0,0.295220295959204,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,1.01850340712568,0.287696137450811,0.648540907100142,1.09824565275233,0,0.372140947668503,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.678980343100753,0.938760993154008,0.167506257441816,0,0,0,0.221464689648775,0,0.327726629431476,0,0.578596234326046,6.03165135757089,10.3342079925555,0,0.827810238914197,0,0,3.11476396215683,0,1.26203287766503,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,2.18502572539483,0.906970670894253,1.13163047853539,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0.356497378384721,0.632073515871632,2.10837217149998,0,0,0.720244376125241,0.776152102696527,0.428674070063185,0.532020700926821,0,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0.645857706783622,0.120625849856312,0.358117032009409,0.328281799490123,0,0,0.683483523191411,0.412773735926445,0.740778109478847,0.565105371014073,0.683471138605126,0.457556346413045,3.56954702987096,2.93898049879682,2.3493995546752,0,0,0,0.432021363287205,0.418176592028937,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.516639293910924,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0.649604114888975,0.179026695667481,0.39736270956253,0.480781798079875,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0,0,0.116876902181569,0.226730383615211,12.8751852956958,17.6736297520667,11.4161539127573,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0.572895513439397,1.54667864109319,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.760437899670719,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0,0.476872379894642,0,0.0941093804153306,0.507687647350059,0,0,0.543216455383447,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p1@ENSMUST00000171255 | |short_description=p1@ENSMUST00000171255 | ||
}} | }} |
Latest revision as of 20:52, 5 August 2015
Short description: | p1@ENSMUST00000171255 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000171255_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -26bp_to_ENSMUST00000171255_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.88e-22 | 46 |
mucosa | 1.72e-13 | 15 |
intestinal mucosa | 4.70e-11 | 13 |
wall of intestine | 4.70e-11 | 13 |
gastrointestinal system mucosa | 4.70e-11 | 13 |
epithelium of mucosa | 2.93e-09 | 9 |
gastrointestinal system epithelium | 2.93e-09 | 9 |
intestinal epithelium | 2.93e-09 | 9 |
simple columnar epithelium | 3.02e-07 | 11 |
organ component layer | 4.19e-07 | 24 |