FFCP PHASE1:Hg19::chr11:61522844..61522875,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=745 | |EntrezGene=745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1181 | |HGNC=1181 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G1 | |UniProt=Q9Y2G1 | ||
|association_with_transcript=0bp_to_ENST00000265460,NM_013279,uc001nse.1_5end | |association_with_transcript=0bp_to_ENST00000265460,NM_013279,uc001nse.1_5end | ||
|cluster_id=chr11:61522844..61522875,+ | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_2_at_C11orf9_5end | |description=CAGE_peak_2_at_C11orf9_5end | ||
|id=chr11:61522844..61522875,+ | |id=chr11:61522844..61522875,+ | ||
|ontology_enrichment_celltype=CL:0002586!1.01e-16!3;CL:0000149!1.16e-12!4 | |ontology_enrichment_celltype=CL:0002586!1.01e-16!3;CL:0000149!1.16e-12!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;7.95e-99;3!CL:0000149;2.01e-74;4!CL:0000147;5.39e-22;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.95e-99,3;CL:0000149,2.01e-74,4;CL:0000147,5.39e-22,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.07e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000966;3.03e-105;5!UBERON:0005388;3.03e-105;5!UBERON:0001802;3.03e-105;5!UBERON:0001781;7.95e-99;3!UBERON:0001782;7.95e-99;3!UBERON:0000970;1.68e-41;20!UBERON:0002104;1.47e-39;21!UBERON:0000020;3.48e-36;23!UBERON:0001032;1.05e-34;24!UBERON:0004456;1.05e-34;24!UBERON:0000019;2.32e-28;19!UBERON:0000047;2.32e-28;19!UBERON:0004088;2.32e-28;19!UBERON:0010230;2.32e-28;19!UBERON:0007625;9.75e-28;11!UBERON:0001456;9.82e-26;21!UBERON:0001896;3.24e-12;3!UBERON:0005290;3.24e-12;3!UBERON:0000033;1.00e-10;50!UBERON:0010371;1.22e-09;31!UBERON:0001444;1.50e-09;48!UBERON:0002298;9.49e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,7.95e-99,3;UBERON:0005424,7.95e-99,3;UBERON:0000966,7.00e-88,6;UBERON:0005388,7.00e-88,6;UBERON:0001802,7.00e-88,6;UBERON:0001781,2.01e-74,4;UBERON:0000970,1.47e-39,21;UBERON:0002104,1.47e-39,21;UBERON:0000020,1.05e-34,24;UBERON:0001032,1.05e-34,24;UBERON:0004456,1.05e-34,24;UBERON:0007625,9.75e-28,11;UBERON:0000019,5.55e-27,20;UBERON:0000047,5.55e-27,20;UBERON:0010312,5.55e-27,20;UBERON:0004088,5.55e-27,20;UBERON:0010230,5.55e-27,20;UBERON:0003072,5.55e-27,20;UBERON:0004128,5.55e-27,20;UBERON:0003071,5.55e-27,20;UBERON:0001456,1.34e-24,22;UBERON:0005085,1.15e-17,31;UBERON:0001896,3.24e-12,3;UBERON:0005290,3.24e-12,3;UBERON:0010096,3.24e-12,3;UBERON:0001444,2.10e-11,49;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0000033,4.77e-10,56;UBERON:0002346,5.89e-10,86;UBERON:0000153,3.98e-09,62;UBERON:0007811,3.98e-09,62;UBERON:0003056,3.98e-09,61;UBERON:0010371,2.57e-08,104;UBERON:0002298,9.49e-07,6 | |||
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|short_description=p2@C11orf9 | |short_description=p2@C11orf9 | ||
}} | }} |
Latest revision as of 16:37, 18 September 2015
Short description: | p2@C11orf9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C11orf9_5end |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | 0bp_to_ENST00000265460, NM_013279, uc001nse.1_5end |
EntrezGene: | C11orf9 |
HGNC: | 1181 |
UniProt: | Q9Y2G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.95e-99 | 3 |
visual pigment cell | 2.01e-74 | 4 |
pigment cell | 5.39e-22 | 14 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 7.95e-99 | 3 |
presumptive retinal pigmented epithelium | 7.95e-99 | 3 |
retina | 7.00e-88 | 6 |
photoreceptor array | 7.00e-88 | 6 |
posterior segment of eyeball | 7.00e-88 | 6 |
layer of retina | 2.01e-74 | 4 |
eye | 1.47e-39 | 21 |
visual system | 1.47e-39 | 21 |
sense organ | 1.05e-34 | 24 |
sensory system | 1.05e-34 | 24 |
entire sense organ system | 1.05e-34 | 24 |
pigment epithelium of eye | 9.75e-28 | 11 |
camera-type eye | 5.55e-27 | 20 |
simple eye | 5.55e-27 | 20 |
immature eye | 5.55e-27 | 20 |
ocular region | 5.55e-27 | 20 |
eyeball of camera-type eye | 5.55e-27 | 20 |
optic cup | 5.55e-27 | 20 |
optic vesicle | 5.55e-27 | 20 |
eye primordium | 5.55e-27 | 20 |
face | 1.34e-24 | 22 |
ectodermal placode | 1.15e-17 | 31 |
medulla oblongata | 3.24e-12 | 3 |
myelencephalon | 3.24e-12 | 3 |
future myelencephalon | 3.24e-12 | 3 |
subdivision of head | 2.10e-11 | 49 |
neural plate | 2.04e-10 | 82 |
presumptive neural plate | 2.04e-10 | 82 |
head | 4.77e-10 | 56 |
neurectoderm | 5.89e-10 | 86 |
anterior region of body | 3.98e-09 | 62 |
craniocervical region | 3.98e-09 | 62 |
pre-chordal neural plate | 3.98e-09 | 61 |
ecto-epithelium | 2.57e-08 | 104 |
brainstem | 9.49e-07 | 6 |