FFCP PHASE1:Mm9::chr19:3376383..3376420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:3376383..3376420,+ | |||
|description=CAGE_peak_at_chr19:3376383..3376420,+ | |description=CAGE_peak_at_chr19:3376383..3376420,+ | ||
|id=chr19:3376383..3376420,+ | |id=chr19:3376383..3376420,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.50e-12,3;CL:0002540,1.50e-12,3;CL:0002476,3.06e-09,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!3.38e-11!85;UBERON:0002100!1.81e-10!98;UBERON:0000466!5.69e-10!79;UBERON:0009569!8.11e-10!66;UBERON:0002107!2.15e-09!22;UBERON:0007499!2.15e-09!22;UBERON:0006925!2.15e-09!22;UBERON:0009497!2.15e-09!22;UBERON:0000015!2.15e-09!22;UBERON:0002423!2.15e-09!22;UBERON:0006235!2.15e-09!22;UBERON:0008835!2.15e-09!22;UBERON:0003894!2.15e-09!22;UBERON:0004161!2.15e-09!22;UBERON:0008836!2.15e-09!22;UBERON:0009854!1.11e-08!23;UBERON:0009856!1.11e-08!23;UBERON:0002405!1.29e-08!70;UBERON:0002365!1.63e-08!25;UBERON:0002330!1.63e-08!25;UBERON:0000926!3.74e-07!193;UBERON:0004120!3.74e-07!193;UBERON:0006603!3.74e-07!193;UBERON:0005172!7.11e-07!49;UBERON:0005173!7.11e-07!49;UBERON:0002417!7.11e-07!49;UBERON:0000916!7.11e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,8.08e-16,14;UBERON:0000117,8.08e-16,14;UBERON:0000171,8.08e-16,14;UBERON:0000170,8.08e-16,14;UBERON:0005597,8.08e-16,14;UBERON:0000118,8.08e-16,14;UBERON:0005153,7.79e-13,17;UBERON:0005178,7.79e-13,17;UBERON:0005181,7.79e-13,17;UBERON:0002224,7.79e-13,17;UBERON:0000915,7.79e-13,17;UBERON:0008947,7.79e-13,17;UBERON:0003258,7.79e-13,17;UBERON:0005177,5.78e-12,79;UBERON:0009569,1.55e-11,66;UBERON:0002100,1.93e-11,90;UBERON:0005157,9.59e-11,20;UBERON:0005911,1.94e-09,69;UBERON:0001041,5.37e-09,80;UBERON:0002107,1.20e-07,22;UBERON:0007499,1.20e-07,22;UBERON:0006925,1.20e-07,22;UBERON:0009497,1.20e-07,22;UBERON:0000015,1.20e-07,22;UBERON:0002423,1.20e-07,22;UBERON:0006235,1.20e-07,22;UBERON:0008835,1.20e-07,22;UBERON:0003894,1.20e-07,22;UBERON:0004161,1.20e-07,22;UBERON:0008836,1.20e-07,22;UBERON:0009854,2.81e-07,23;UBERON:0009856,2.81e-07,23 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.946386496074713,0,0.84877930359606,0.17008658030214,0.0992909512008853,0.261199789138935,0.319984845586813,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,1.0470474879476,0,0.683045484958446,0.971020706062307,0.125896817975577,0.304130793658544,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1496490104849,1.97773272513395,2.1314403448383,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0,0.860423876981386,0,0.539703191637817,0,0.896053774194671,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0.23517741427141,0,0,0.578397427679647,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,2.07516838961004,0,0.196558995113203,0.449724224769707,0.608580364165509,0.72353147925725,0.50925170356284,1.15078454980324,1.13494658742525,0.823684239564244,7.18841032636773,2.60498663367952,0.936113019343682,1.76805214562978,0.538192240565737,1.4473305640901,1.29327233116623,0,0,0,0,1.00503754465089,2.14239276797412,1.17080188714679,0.788175720530955,1.55025282754142,1.43509291791738,2.13022309130459,0.863424909329478,1.44649058581512,3.01582567878545,22.3001330365671,0,0.551873492609465,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.329940245945071,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0.291480836629851,0,1.19609616558497,0.619160603889667,0.740778109478847,0.565105371014073,0.820165366326151,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0,0,0.64183841918363,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.946386496074713,0,0.84877930359606,0.17008658030214,0.0992909512008853,0.261199789138935,0.319984845586813,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,1.0470474879476,0,0.683045484958446,0.971020706062307,0.125896817975577,0.304130793658544,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1496490104849,1.97773272513395,2.1314403448383,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0,0.860423876981386,0,0.539703191637817,0,0.896053774194671,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0.23517741427141,0,0,0.578397427679647,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,2.07516838961004,0,0.196558995113203,0.449724224769707,0.608580364165509,0.72353147925725,0.50925170356284,1.15078454980324,1.13494658742525,0.823684239564244,7.18841032636773,2.60498663367952,0.936113019343682,1.76805214562978,0.538192240565737,1.4473305640901,1.29327233116623,0,0,0,0,1.00503754465089,2.14239276797412,1.17080188714679,0.788175720530955,1.55025282754142,1.43509291791738,2.13022309130459,0.863424909329478,1.44649058581512,3.01582567878545,22.3001330365671,0,0.551873492609465,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.329940245945071,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0.291480836629851,0,1.19609616558497,0.619160603889667,0.740778109478847,0.565105371014073,0.820165366326151,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0,0,0.64183841918363,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421 | ||
|short_description=p@chr19:3376383..3376420,+ | |short_description=p@chr19:3376383..3376420,+ | ||
}} | }} |
Latest revision as of 22:27, 3 August 2015
Short description: | p@chr19:3376383..3376420, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:3376383..3376420, + |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.50e-12 | 3 |
mesenchymal stem cell of the bone marrow | 1.50e-12 | 3 |
bone marrow macrophage | 3.06e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lung | 8.08e-16 | 14 |
respiratory tube | 8.08e-16 | 14 |
respiration organ | 8.08e-16 | 14 |
pair of lungs | 8.08e-16 | 14 |
lung primordium | 8.08e-16 | 14 |
lung bud | 8.08e-16 | 14 |
epithelial bud | 7.79e-13 | 17 |
thoracic cavity element | 7.79e-13 | 17 |
thoracic segment organ | 7.79e-13 | 17 |
thoracic cavity | 7.79e-13 | 17 |
thoracic segment of trunk | 7.79e-13 | 17 |
respiratory primordium | 7.79e-13 | 17 |
endoderm of foregut | 7.79e-13 | 17 |
trunk region element | 5.78e-12 | 79 |
subdivision of trunk | 1.55e-11 | 66 |
trunk | 1.93e-11 | 90 |
epithelial fold | 9.59e-11 | 20 |
endo-epithelium | 1.94e-09 | 69 |
foregut | 5.37e-09 | 80 |
liver | 1.20e-07 | 22 |
epithelial sac | 1.20e-07 | 22 |
digestive gland | 1.20e-07 | 22 |
epithelium of foregut-midgut junction | 1.20e-07 | 22 |
anatomical boundary | 1.20e-07 | 22 |
hepatobiliary system | 1.20e-07 | 22 |
foregut-midgut junction | 1.20e-07 | 22 |
hepatic diverticulum | 1.20e-07 | 22 |
liver primordium | 1.20e-07 | 22 |
septum transversum | 1.20e-07 | 22 |
liver bud | 1.20e-07 | 22 |
digestive tract diverticulum | 2.81e-07 | 23 |
sac | 2.81e-07 | 23 |