FFCP PHASE1:Hg19::chr11:63964439..63964450,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10963 | |EntrezGene=10963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11387 | |HGNC=11387 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000537479_5end | |association_with_transcript=-17bp_to_ENST00000537479_5end | ||
|cluster_id=chr11:63964439..63964450,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_14_at_STIP1_5end | |description=CAGE_peak_14_at_STIP1_5end | ||
|id=chr11:63964439..63964450,+ | |id=chr11:63964439..63964450,+ | ||
|ontology_enrichment_celltype=CL:0000840!1.24e-23!5;CL:0001029!1.24e-23!5;CL:0002566!8.86e-17!1;CL:0000990!5.43e-16!8;CL:0000235!1.12e-14!10;CL:0000451!3.34e-13!10;CL:0002194!1.78e-08!63;CL:0000576!1.78e-08!63;CL:0000040!1.78e-08!63;CL:0000559!1.78e-08!63;CL:0002009!3.29e-08!65;CL:0000839!1.31e-07!70;CL:0000557!1.69e-07!71;CL:0000148!4.52e-07!10;CL:0000541!4.52e-07!10;CL:0000766!5.42e-07!76 | |ontology_enrichment_celltype=CL:0000840!1.24e-23!5;CL:0001029!1.24e-23!5;CL:0002566!8.86e-17!1;CL:0000990!5.43e-16!8;CL:0000235!1.12e-14!10;CL:0000451!3.34e-13!10;CL:0002194!1.78e-08!63;CL:0000576!1.78e-08!63;CL:0000040!1.78e-08!63;CL:0000559!1.78e-08!63;CL:0002009!3.29e-08!65;CL:0000839!1.31e-07!70;CL:0000557!1.69e-07!71;CL:0000148!4.52e-07!10;CL:0000541!4.52e-07!10;CL:0000766!5.42e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.37e-50;6!CL:0002566;5.97e-34;1!CL:0000840;7.17e-23;5!CL:0000990;1.26e-15;8!CL:0000451;5.58e-13;10!CL:0000473;8.76e-09;39!CL:0000234;8.76e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.55e-50,6;CL:0002566,7.06e-34,1;CL:0000840,7.58e-23,5;CL:0001029,7.58e-23,5;CL:0000990,1.31e-15,8;CL:0002194,3.13e-14,59;CL:0000576,3.13e-14,59;CL:0000040,3.13e-14,59;CL:0000559,3.13e-14,59;CL:0002009,8.69e-14,61;CL:0000451,5.76e-13,10;CL:0000839,8.53e-13,66;CL:0000557,1.30e-12,67;CL:0000766,8.79e-12,72;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108;CL:0002087,1.46e-07,115;CL:0002031,2.91e-07,120;CL:0000473,5.88e-07,48;CL:0000234,5.88e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003112!3.07e-16!1;UBERON:0000032!3.07e-16!1;UBERON:0005253!3.07e-16!1;UBERON:0003128!3.07e-16!1;UBERON:0002241!3.07e-16!1;UBERON:0001703!3.07e-16!1;UBERON:0004761!3.07e-16!1;UBERON:0009617!3.07e-16!1;UBERON:0004765!6.27e-07!101;UBERON:0001434!6.27e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-11,76;UBERON:0001474,2.04e-10,82;UBERON:0004765,1.55e-09,90;UBERON:0002405,3.03e-09,93;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0001434,1.24e-08,100;UBERON:0002193,5.03e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,0.522389211897802,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12616634043027,3.41851673264075,0,0,0,0,0,0,0,0,0,0,0,3.04789892602411,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,0.522389211897802,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12616634043027,3.41851673264075,0,0,0,0,0,0,0,0,0,0,0,3.04789892602411,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@STIP1 | |short_description=p14@STIP1 | ||
}} | }} |
Latest revision as of 01:17, 19 September 2015
Short description: | p14@STIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_STIP1_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -17bp_to_ENST00000537479_5end |
EntrezGene: | STIP1 |
HGNC: | 11387 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.55e-50 | 6 |
dark melanocyte | 7.06e-34 | 1 |
immature conventional dendritic cell | 7.58e-23 | 5 |
common dendritic progenitor | 7.58e-23 | 5 |
conventional dendritic cell | 1.31e-15 | 8 |
monopoietic cell | 3.13e-14 | 59 |
monocyte | 3.13e-14 | 59 |
monoblast | 3.13e-14 | 59 |
promonocyte | 3.13e-14 | 59 |
macrophage dendritic cell progenitor | 8.69e-14 | 61 |
dendritic cell | 5.76e-13 | 10 |
myeloid lineage restricted progenitor cell | 8.53e-13 | 66 |
granulocyte monocyte progenitor cell | 1.30e-12 | 67 |
myeloid leukocyte | 8.79e-12 | 72 |
myeloid cell | 5.03e-08 | 108 |
common myeloid progenitor | 5.03e-08 | 108 |
nongranular leukocyte | 1.46e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
defensive cell | 5.88e-07 | 48 |
phagocyte | 5.88e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-11 | 76 |
bone element | 2.04e-10 | 82 |
skeletal element | 1.55e-09 | 90 |
immune system | 3.03e-09 | 93 |
hematopoietic system | 8.48e-09 | 98 |
blood island | 8.48e-09 | 98 |
skeletal system | 1.24e-08 | 100 |
hemolymphoid system | 5.03e-08 | 108 |