FFCP PHASE1:Mm9::chr15:38385124..38385138,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:38385124..38385138,+ | |||
|description=CAGE_peak_at_chr15:38385124..38385138,+ | |description=CAGE_peak_at_chr15:38385124..38385138,+ | ||
|id=chr15:38385124..38385138,+ | |id=chr15:38385124..38385138,+ | ||
|ontology_enrichment_celltype=CL:0000068!4.53e-15!3;CL:0002202!4.53e-15!3;CL:0000069!4.53e-15!3;CL:0002632!4.53e-15!3;CL:0002368!4.53e-15!3;CL:0000307!4.53e-15!3;CL:0000377!4.53e-15!3;CL:0000066!1.76e-08!25;CL:0000223!3.93e-08!20;CL:0002076!9.09e-08!15;CL:0000192!4.56e-07!3;CL:0000359!4.56e-07!3;CL:0002539!4.56e-07!3;CL:0000514!4.56e-07!3 | |ontology_enrichment_celltype=CL:0000068!4.53e-15!3;CL:0002202!4.53e-15!3;CL:0000069!4.53e-15!3;CL:0002632!4.53e-15!3;CL:0002368!4.53e-15!3;CL:0000307!4.53e-15!3;CL:0000377!4.53e-15!3;CL:0000066!1.76e-08!25;CL:0000223!3.93e-08!20;CL:0002076!9.09e-08!15;CL:0000192!4.56e-07!3;CL:0000359!4.56e-07!3;CL:0002539!4.56e-07!3;CL:0000514!4.56e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.04e-65,3;CL:0002202,6.04e-65,3;CL:0000069,6.04e-65,3;CL:0002632,6.04e-65,3;CL:0002368,6.04e-65,3;CL:0000307,6.04e-65,3;CL:0000377,6.04e-65,3;CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000223,3.40e-18,20;CL:0000066,9.61e-15,25;CL:0002076,7.25e-14,15;CL:0000215,1.13e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!4.53e-15!3;UBERON:0001005!4.53e-15!3;UBERON:0007196!4.53e-15!3;UBERON:0001558!4.53e-15!3;UBERON:0005178!2.97e-09!17;UBERON:0005181!2.97e-09!17;UBERON:0002224!2.97e-09!17;UBERON:0000915!2.97e-09!17;UBERON:0008947!2.97e-09!17;UBERON:0003258!2.97e-09!17;UBERON:0000055!4.80e-09!5;UBERON:0001981!4.80e-09!5;UBERON:0002049!4.80e-09!5;UBERON:0007500!4.80e-09!5;UBERON:0007798!4.80e-09!5;UBERON:0004537!4.80e-09!5;UBERON:0006965!4.80e-09!5;UBERON:0001135!4.56e-07!3;UBERON:0004237!4.56e-07!3;UBERON:0004695!4.56e-07!3;UBERON:0002111!4.56e-07!3;UBERON:0004178!4.56e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.04e-65,3;UBERON:0001005,6.04e-65,3;UBERON:0007196,6.04e-65,3;UBERON:0001558,6.04e-65,3;UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1;UBERON:0005178,2.40e-12,17;UBERON:0005181,2.40e-12,17;UBERON:0002224,2.40e-12,17;UBERON:0000915,2.40e-12,17;UBERON:0008947,2.40e-12,17;UBERON:0003258,2.40e-12,17;UBERON:0000072,4.25e-08,27 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8263411949453,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,2.78695852022608,1.01104889002957,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8263411949453,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,2.78695852022608,1.01104889002957,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:38385124..38385138,+ | |short_description=p@chr15:38385124..38385138,+ | ||
}} | }} |
Latest revision as of 05:44, 5 August 2015
Short description: | p@chr15:38385124..38385138, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:38385124..38385138, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.04e-65 | 3 |
epithelial cell of tracheobronchial tree | 6.04e-65 | 3 |
branched duct epithelial cell | 6.04e-65 | 3 |
epithelial cell of lower respiratory tract | 6.04e-65 | 3 |
respiratory epithelial cell | 6.04e-65 | 3 |
tracheal epithelial cell | 6.04e-65 | 3 |
tracheoblast | 6.04e-65 | 3 |
lining cell | 3.06e-23 | 1 |
meso-epithelial cell | 3.06e-23 | 1 |
endothelial cell | 3.06e-23 | 1 |
endothelial cell of sinusoid | 3.06e-23 | 1 |
endothelial cell of hepatic sinusoid | 3.06e-23 | 1 |
endodermal cell | 3.40e-18 | 20 |
epithelial cell | 9.61e-15 | 25 |
endo-epithelial cell | 7.25e-14 | 15 |
barrier cell | 1.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.04e-65 | 3 |
respiratory airway | 6.04e-65 | 3 |
tracheobronchial tree | 6.04e-65 | 3 |
lower respiratory tract | 6.04e-65 | 3 |
bile duct | 3.06e-23 | 1 |
hepatic sinusoid | 3.06e-23 | 1 |
parenchyma | 3.06e-23 | 1 |
abdomen blood vessel | 3.06e-23 | 1 |
sinusoid | 3.06e-23 | 1 |
digestive system duct | 3.06e-23 | 1 |
abdominal segment blood vessel | 3.06e-23 | 1 |
trunk blood vessel | 3.06e-23 | 1 |
liver parenchyma | 3.06e-23 | 1 |
liver lobule | 3.06e-23 | 1 |
biliary system | 3.06e-23 | 1 |
biliary tree | 3.06e-23 | 1 |
biliary bud | 3.06e-23 | 1 |
hepatic duct | 3.06e-23 | 1 |
thoracic cavity element | 2.40e-12 | 17 |
thoracic segment organ | 2.40e-12 | 17 |
thoracic cavity | 2.40e-12 | 17 |
thoracic segment of trunk | 2.40e-12 | 17 |
respiratory primordium | 2.40e-12 | 17 |
endoderm of foregut | 2.40e-12 | 17 |
segment of respiratory tract | 4.25e-08 | 27 |