FFCP PHASE1:Mm9::chr18:16927331..16927333,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:16927331..16927333,- | |||
|description=CAGE_peak_at_chr18:16927331..16927333,- | |description=CAGE_peak_at_chr18:16927331..16927333,- | ||
|id=chr18:16927331..16927333,- | |id=chr18:16927331..16927333,- | ||
|ontology_enrichment_celltype=CL:0000393!1.61e-11!39;CL:0000211!1.61e-11!39;CL:0000055!3.42e-11!50;CL:0000221!4.79e-10!44;CL:0000133!4.79e-10!44;CL:0002319!5.12e-10!43;CL:0000540!7.65e-10!33;CL:0000047!7.65e-10!33;CL:0000031!7.65e-10!33;CL:0000404!7.65e-10!33;CL:0000107!2.82e-08!9;CL:0002321!9.76e-07!70;CL:0000220!9.76e-07!70 | |ontology_enrichment_celltype=CL:0000393!1.61e-11!39;CL:0000211!1.61e-11!39;CL:0000055!3.42e-11!50;CL:0000221!4.79e-10!44;CL:0000133!4.79e-10!44;CL:0002319!5.12e-10!43;CL:0000540!7.65e-10!33;CL:0000047!7.65e-10!33;CL:0000031!7.65e-10!33;CL:0000404!7.65e-10!33;CL:0000107!2.82e-08!9;CL:0002321!9.76e-07!70;CL:0000220!9.76e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.21e-20,9;CL:0000393,1.25e-15,39;CL:0000211,1.25e-15,39;CL:0000540,2.10e-12,33;CL:0000047,2.10e-12,33;CL:0000031,2.10e-12,33;CL:0000404,2.10e-12,33;CL:0002321,3.06e-12,70;CL:0002319,2.36e-10,43;CL:0000221,4.75e-10,44;CL:0000133,4.75e-10,44;CL:0002494,1.02e-08,3;CL:0000737,1.02e-08,3;CL:0000746,1.02e-08,3;CL:0000513,1.02e-08,3;CL:0002609,4.82e-08,6;CL:0000723,1.89e-07,91;CL:0000048,1.89e-07,91;CL:0000034,9.64e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.22e-17!75;UBERON:0001016!4.22e-17!75;UBERON:0001017!5.97e-17!73;UBERON:0005743!5.97e-17!73;UBERON:0002346!1.69e-14!71;UBERON:0003075!1.69e-14!71;UBERON:0007284!1.69e-14!71;UBERON:0004121!4.80e-14!102;UBERON:0000924!4.80e-14!102;UBERON:0006601!4.80e-14!102;UBERON:0000025!4.08e-12!114;UBERON:0001049!1.10e-11!52;UBERON:0005068!1.10e-11!52;UBERON:0006241!1.10e-11!52;UBERON:0007135!1.10e-11!52;UBERON:0000955!2.50e-11!50;UBERON:0006238!2.50e-11!50;UBERON:0000956!3.05e-11!21;UBERON:0001869!3.05e-11!21;UBERON:0000203!3.05e-11!21;UBERON:0003056!4.53e-11!49;UBERON:0002616!4.71e-11!49;UBERON:0000033!1.03e-10!63;UBERON:0002020!1.15e-10!34;UBERON:0003080!1.66e-10!40;UBERON:0002791!3.12e-10!29;UBERON:0003528!3.12e-10!29;UBERON:0001893!3.12e-10!29;UBERON:0004111!4.14e-10!122;UBERON:0002780!6.10e-10!39;UBERON:0001890!6.10e-10!39;UBERON:0006240!6.10e-10!39;UBERON:0007100!7.04e-09!18;UBERON:0000948!7.04e-09!18;UBERON:0005498!7.04e-09!18;UBERON:0004140!7.04e-09!18;UBERON:0009881!7.04e-09!18;UBERON:0004141!7.04e-09!18;UBERON:0003084!7.04e-09!18;UBERON:0007005!7.04e-09!18;UBERON:0004139!7.04e-09!18;UBERON:0004291!7.04e-09!18;UBERON:0002619!7.95e-09!17;UBERON:0002410!2.82e-08!9;UBERON:0000010!8.69e-08!11;UBERON:0004535!1.09e-07!23;UBERON:0001009!1.09e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.21e-20,9;UBERON:0000010,2.66e-16,11;UBERON:0007100,2.16e-11,18;UBERON:0000948,2.16e-11,18;UBERON:0005498,2.16e-11,18;UBERON:0004140,2.16e-11,18;UBERON:0009881,2.16e-11,18;UBERON:0004141,2.16e-11,18;UBERON:0003084,2.16e-11,18;UBERON:0007005,2.16e-11,18;UBERON:0004139,2.16e-11,18;UBERON:0004291,2.16e-11,18;UBERON:0010314,2.88e-10,92;UBERON:0000011,7.62e-10,3;UBERON:0010313,1.69e-09,3;UBERON:0002342,1.69e-09,3;UBERON:0002005,1.69e-09,3;UBERON:0005428,1.69e-09,3;UBERON:0005062,1.69e-09,3;UBERON:0001017,9.17e-09,73;UBERON:0004535,1.42e-08,23;UBERON:0001009,1.42e-08,23;UBERON:0001016,1.98e-08,75;UBERON:0004121,9.21e-07,95;UBERON:0000924,9.21e-07,95;UBERON:0006601,9.21e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0.782391344348039,1.09012578190223,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,1.02903774414379,2.0057340795713,1.54701627683233,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.45165457231869,2.16009501330705,1.68259969081106,0.285650984403804,0,0.61245399607477,0.191690942036473,3.67687514644008,0,0.510749352340751,0.614426133024974,0.395658863190582,0.365950574409639,0,0,0,0.763991238884051,0.294628585473668,0.854230084794618,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0,2.15881276655127,2.59910566979068,1.34408066129201,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.823120949949934,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0.180062129805349,1.9591626318643,0.204109497453984,0.12811372028485,0.187403449119458,0.776110112217047,0.431135985865684,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.828503090142008,0.703578179943289,2.16074473753218,1.89395788468168,0.590292695242212,1.85120535464854,5.11574678450897,0,2.10177616260905,0.658239399653922,1.31333971263276,0.0810688095458557,0,0.658650345873152,0.939444931322602,0.420579897128254,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,0,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,2.52406575533005,1.17131623288992,3.44677436372478,2.15071918157297,2.22798674082394,2.54768877709949,0.809621403349789,3.79932615284705,1.18586333383957,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0,0.214337035031592,0,0.178368817602071,0.822745103010605,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.469428954583016,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0,0,0.888986911206461,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.256100609619477,0.574354689556133,0,0.695305955669133,0.38581844092741,0.824171801606613,0.588795680537589,0,0.70990322463735,0,0.290692833264657,0.188218760830661,0.338458431566706,0.365855945745545,1.8414879800649,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0.782391344348039,1.09012578190223,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,1.02903774414379,2.0057340795713,1.54701627683233,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.45165457231869,2.16009501330705,1.68259969081106,0.285650984403804,0,0.61245399607477,0.191690942036473,3.67687514644008,0,0.510749352340751,0.614426133024974,0.395658863190582,0.365950574409639,0,0,0,0.763991238884051,0.294628585473668,0.854230084794618,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0,2.15881276655127,2.59910566979068,1.34408066129201,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.823120949949934,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0.180062129805349,1.9591626318643,0.204109497453984,0.12811372028485,0.187403449119458,0.776110112217047,0.431135985865684,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.828503090142008,0.703578179943289,2.16074473753218,1.89395788468168,0.590292695242212,1.85120535464854,5.11574678450897,0,2.10177616260905,0.658239399653922,1.31333971263276,0.0810688095458557,0,0.658650345873152,0.939444931322602,0.420579897128254,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,0,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,2.52406575533005,1.17131623288992,3.44677436372478,2.15071918157297,2.22798674082394,2.54768877709949,0.809621403349789,3.79932615284705,1.18586333383957,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0,0.214337035031592,0,0.178368817602071,0.822745103010605,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.469428954583016,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0,0,0.888986911206461,0,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.256100609619477,0.574354689556133,0,0.695305955669133,0.38581844092741,0.824171801606613,0.588795680537589,0,0.70990322463735,0,0.290692833264657,0.188218760830661,0.338458431566706,0.365855945745545,1.8414879800649,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr18:16927331..16927333,- | |short_description=p@chr18:16927331..16927333,- | ||
}} | }} |
Latest revision as of 13:34, 5 August 2015
Short description: | p@chr18:16927331..16927333, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:16927331..16927333, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.21e-20 | 9 |
electrically responsive cell | 1.25e-15 | 39 |
electrically active cell | 1.25e-15 | 39 |
neuron | 2.10e-12 | 33 |
neuronal stem cell | 2.10e-12 | 33 |
neuroblast | 2.10e-12 | 33 |
electrically signaling cell | 2.10e-12 | 33 |
embryonic cell | 3.06e-12 | 70 |
neural cell | 2.36e-10 | 43 |
ectodermal cell | 4.75e-10 | 44 |
neurectodermal cell | 4.75e-10 | 44 |
cardiocyte | 1.02e-08 | 3 |
striated muscle cell | 1.02e-08 | 3 |
cardiac muscle cell | 1.02e-08 | 3 |
cardiac muscle myoblast | 1.02e-08 | 3 |
neuron of cerebral cortex | 4.82e-08 | 6 |
somatic stem cell | 1.89e-07 | 91 |
multi fate stem cell | 1.89e-07 | 91 |
stem cell | 9.64e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.21e-20 | 9 |
peripheral nervous system | 2.66e-16 | 11 |
primary circulatory organ | 2.16e-11 | 18 |
heart | 2.16e-11 | 18 |
primitive heart tube | 2.16e-11 | 18 |
primary heart field | 2.16e-11 | 18 |
anterior lateral plate mesoderm | 2.16e-11 | 18 |
heart tube | 2.16e-11 | 18 |
heart primordium | 2.16e-11 | 18 |
cardiac mesoderm | 2.16e-11 | 18 |
cardiogenic plate | 2.16e-11 | 18 |
heart rudiment | 2.16e-11 | 18 |
structure with developmental contribution from neural crest | 2.88e-10 | 92 |
parasympathetic nervous system | 7.62e-10 | 3 |
neural crest-derived structure | 1.69e-09 | 3 |
neural crest | 1.69e-09 | 3 |
enteric nervous system | 1.69e-09 | 3 |
vagal neural crest | 1.69e-09 | 3 |
neural fold | 1.69e-09 | 3 |
central nervous system | 9.17e-09 | 73 |
cardiovascular system | 1.42e-08 | 23 |
circulatory system | 1.42e-08 | 23 |
nervous system | 1.98e-08 | 75 |
ectoderm-derived structure | 9.21e-07 | 95 |
ectoderm | 9.21e-07 | 95 |
presumptive ectoderm | 9.21e-07 | 95 |