FFCP PHASE1:Hg19::chr12:6660295..6660312,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25900 | |EntrezGene=25900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |HGNC=24970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-160bp_to_ENST00000416019_5end | |association_with_transcript=-160bp_to_ENST00000416019_5end | ||
|cluster_id=chr12:6660295..6660312,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_11_at_IFFO1_5end | |description=CAGE_peak_11_at_IFFO1_5end | ||
|id=chr12:6660295..6660312,- | |id=chr12:6660295..6660312,- | ||
|ontology_enrichment_celltype=CL:0002194!1.91e-26!63;CL:0000576!1.91e-26!63;CL:0000040!1.91e-26!63;CL:0000559!1.91e-26!63;CL:0002009!2.76e-25!65;CL:0002057!3.34e-24!42;CL:0000839!3.76e-24!70;CL:0000557!1.19e-23!71;CL:0000766!1.15e-22!76;CL:0000860!5.38e-22!45;CL:0000763!8.22e-12!112;CL:0000049!8.22e-12!112;CL:0002087!8.15e-10!119;CL:0002031!1.01e-09!124;CL:0000738!4.45e-08!140 | |ontology_enrichment_celltype=CL:0002194!1.91e-26!63;CL:0000576!1.91e-26!63;CL:0000040!1.91e-26!63;CL:0000559!1.91e-26!63;CL:0002009!2.76e-25!65;CL:0002057!3.34e-24!42;CL:0000839!3.76e-24!70;CL:0000557!1.19e-23!71;CL:0000766!1.15e-22!76;CL:0000860!5.38e-22!45;CL:0000763!8.22e-12!112;CL:0000049!8.22e-12!112;CL:0002087!8.15e-10!119;CL:0002031!1.01e-09!124;CL:0000738!4.45e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.64e-73;33!CL:0002057;3.64e-73;33!CL:0000473;4.48e-63;39!CL:0000234;4.48e-63;39!CL:0000576;7.52e-51;48!CL:0000766;1.97e-25;69!CL:0002619;3.37e-12;3!CL:0000763;4.92e-12;100!CL:0000738;7.28e-09;136!CL:0002087;1.85e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.12e-66,48;CL:0000234,3.12e-66,48;CL:0002194,6.90e-64,59;CL:0000576,6.90e-64,59;CL:0000040,6.90e-64,59;CL:0000559,6.90e-64,59;CL:0002009,1.01e-61,61;CL:0000860,1.98e-61,42;CL:0002057,1.98e-61,42;CL:0000839,7.05e-57,66;CL:0000557,5.39e-56,67;CL:0000766,6.14e-52,72;CL:0000763,1.07e-33,108;CL:0000049,1.07e-33,108;CL:0002087,1.84e-31,115;CL:0002031,5.07e-30,120;CL:0000738,4.05e-26,136;CL:0002032,1.47e-21,161;CL:0000837,1.47e-21,161;CL:0000037,1.60e-20,168;CL:0000988,2.62e-19,177;CL:0002619,3.77e-12,3;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0000219,9.21e-09,386;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.79e-50;42!CL:0000049;6.42e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.91e-24!80;UBERON:0001474!1.68e-21!86;UBERON:0004765!1.03e-18!101;UBERON:0001434!1.03e-18!101;UBERON:0002390!3.00e-16!102;UBERON:0003061!3.00e-16!102;UBERON:0002193!1.38e-14!112;UBERON:0002405!6.66e-14!115;UBERON:0002204!6.69e-12!167;UBERON:0003081!4.33e-10!216;UBERON:0007023!8.71e-10!115;UBERON:0000062!2.15e-08!511;UBERON:0000468!9.26e-08!659;UBERON:0000467!9.39e-08!625;UBERON:0000480!1.07e-07!626;UBERON:0002619!9.46e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.52e-49,76;UBERON:0001474,2.74e-45,82;UBERON:0004765,5.11e-41,90;UBERON:0002405,1.33e-39,93;UBERON:0002390,1.95e-37,98;UBERON:0003061,1.95e-37,98;UBERON:0001434,1.25e-36,100;UBERON:0002193,1.07e-33,108;UBERON:0002204,7.93e-23,167;UBERON:0003081,3.60e-18,203;UBERON:0000926,1.94e-10,315;UBERON:0004120,1.94e-10,315;UBERON:0006603,1.94e-10,315;UBERON:0002384,2.45e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,2.23915474239924,0.32389366601898,2.31818010870768,1.45398238779565,2.26725566213286,1.21292030593908,1.62700325833979,3.28934310417461,1.54853185447552,3.16461631554365,2.81776777182011,2.83778675866302,0.344745680736619,0.645484683583826,0,1.12945403725563,1.63743690034707,1.57306439111559,0.918251677112708,0.641858054152187,0.639337125799041,5.60747210317417,6.78176435913548,3.83602275479425,0,0,0,3.01498398308092,4.17186334736161,3.04064382587163,0,0,0,0,0,0,0.112328631146495,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.600182192168805,0,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,1.50677127429638,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,2.23915474239924,0.32389366601898,2.31818010870768,1.45398238779565,2.26725566213286,1.21292030593908,1.62700325833979,3.28934310417461,1.54853185447552,3.16461631554365,2.81776777182011,2.83778675866302,0.344745680736619,0.645484683583826,0,1.12945403725563,1.63743690034707,1.57306439111559,0.918251677112708,0.641858054152187,0.639337125799041,5.60747210317417,6.78176435913548,3.83602275479425,0,0,0,3.01498398308092,4.17186334736161,3.04064382587163,0,0,0,0,0,0,0.112328631146495,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.600182192168805,0,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,1.50677127429638,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p11@IFFO1 | |short_description=p11@IFFO1 | ||
}} | }} |
Latest revision as of 00:30, 20 September 2015
Short description: | p11@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_IFFO1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -160bp_to_ENST00000416019_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.12e-66 | 48 |
phagocyte | 3.12e-66 | 48 |
monopoietic cell | 6.90e-64 | 59 |
monocyte | 6.90e-64 | 59 |
monoblast | 6.90e-64 | 59 |
promonocyte | 6.90e-64 | 59 |
macrophage dendritic cell progenitor | 1.01e-61 | 61 |
classical monocyte | 1.98e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.98e-61 | 42 |
myeloid lineage restricted progenitor cell | 7.05e-57 | 66 |
granulocyte monocyte progenitor cell | 5.39e-56 | 67 |
myeloid leukocyte | 6.14e-52 | 72 |
myeloid cell | 1.07e-33 | 108 |
common myeloid progenitor | 1.07e-33 | 108 |
nongranular leukocyte | 1.84e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 5.07e-30 | 120 |
leukocyte | 4.05e-26 | 136 |
hematopoietic oligopotent progenitor cell | 1.47e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-21 | 161 |
hematopoietic stem cell | 1.60e-20 | 168 |
hematopoietic cell | 2.62e-19 | 177 |
adult endothelial progenitor cell | 3.77e-12 | 3 |
mesenchymal cell | 5.77e-10 | 354 |
connective tissue cell | 1.06e-09 | 361 |
motile cell | 9.21e-09 | 386 |
multi fate stem cell | 1.30e-07 | 427 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.52e-49 | 76 |
bone element | 2.74e-45 | 82 |
skeletal element | 5.11e-41 | 90 |
immune system | 1.33e-39 | 93 |
hematopoietic system | 1.95e-37 | 98 |
blood island | 1.95e-37 | 98 |
skeletal system | 1.25e-36 | 100 |
hemolymphoid system | 1.07e-33 | 108 |
musculoskeletal system | 7.93e-23 | 167 |
lateral plate mesoderm | 3.60e-18 | 203 |
mesoderm | 1.94e-10 | 315 |
mesoderm-derived structure | 1.94e-10 | 315 |
presumptive mesoderm | 1.94e-10 | 315 |
connective tissue | 2.45e-09 | 371 |