FFCP PHASE1:Mm9::chr5:77784612..77784627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=850 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:77784612..77784627,- | |||
|description=CAGE_peak_at_chr5:77784612..77784627,- | |description=CAGE_peak_at_chr5:77784612..77784627,- | ||
|id=chr5:77784612..77784627,- | |id=chr5:77784612..77784627,- | ||
|ontology_enrichment_celltype=CL:0000222!4.72e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.81e-18,7;CL:0002494,1.28e-16,3;CL:0000737,1.28e-16,3;CL:0000746,1.28e-16,3;CL:0000513,1.28e-16,3;CL:0000068,6.53e-16,3;CL:0002202,6.53e-16,3;CL:0000069,6.53e-16,3;CL:0002632,6.53e-16,3;CL:0002368,6.53e-16,3;CL:0000307,6.53e-16,3;CL:0000377,6.53e-16,3;CL:0000680,3.88e-14,6;CL:0000187,3.88e-14,6;CL:0000056,3.88e-14,6;CL:0000355,1.77e-09,9;CL:0002092,1.65e-07,3;CL:0002540,1.65e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.01e-08!193;UBERON:0004120!5.01e-08!193;UBERON:0006603!5.01e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.53e-16,3;UBERON:0001005,6.53e-16,3;UBERON:0007196,6.53e-16,3;UBERON:0001558,6.53e-16,3;UBERON:0001134,1.77e-09,9;UBERON:0002036,1.77e-09,9;UBERON:0002385,1.77e-09,9;UBERON:0000486,1.77e-09,9;UBERON:0007503,1.77e-09,9;UBERON:0001015,1.77e-09,9;UBERON:0002329,1.77e-09,9;UBERON:0003082,1.77e-09,9;UBERON:0003059,1.77e-09,9;UBERON:0007282,1.77e-09,9;UBERON:0004290,1.77e-09,9;UBERON:0009618,1.77e-09,9;UBERON:0000055,2.07e-09,5;UBERON:0007500,2.07e-09,5;UBERON:0001981,2.07e-09,5;UBERON:0002049,2.07e-09,5;UBERON:0007798,2.07e-09,5;UBERON:0004537,2.07e-09,5;UBERON:0006965,2.07e-09,5;UBERON:0000383,1.53e-08,10;UBERON:0003103,2.30e-08,43;UBERON:0007524,8.94e-08,11;UBERON:0003077,8.94e-08,11;UBERON:0007285,8.94e-08,11;UBERON:0004535,1.38e-07,23;UBERON:0001009,1.38e-07,23;UBERON:0002100,1.69e-07,90;UBERON:0004872,8.31e-07,33;UBERON:0003104,8.41e-07,61;UBERON:0009142,8.41e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.28482726513177,0,0.436050312760893,0.219686182734472,0.972149495371417,0,0,0,0,0,5.65970759279083,6.87680255853016,5.15672092277442,0,0,0,0.338844532069132,0,1.3498495759221,0.988866362566974,1.4209602298922,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,2.31891590961342,3.44169550792555,0,0,0,0,0.280888840263504,0.681721290312231,0.779358013808606,0,0,0,0,0,2.38140145112336,1.52015919285059,2.02209778005913,0.34255163915718,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.904335843315735,0.587943535678524,0.628332956648377,0.247194967734374,1.15679485535929,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.248813941220186,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.350296027101508,0.493679549740441,0.164167464079095,0.162137619091711,0.438599962275997,0.219550115291051,0.671032093801859,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.58489226135736,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.631222379012867,0.822074982615345,1.03327103585722,1.255989822731,1.35736880313981,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,1.01031551178845,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,0.655453258862952,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.301564624640779,0,0.328281799490123,0.582961673259701,0,0.341741761595705,0,0,0,0.410082683163076,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.330613822901344,0.523511883968059,0.129614973291793,0,0.56369293868419,0.448549638131936,0,0,0.129159823477731,0,0,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.643105137237198,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.191288332068843,0.661774257358546,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.28482726513177,0,0.436050312760893,0.219686182734472,0.972149495371417,0,0,0,0,0,5.65970759279083,6.87680255853016,5.15672092277442,0,0,0,0.338844532069132,0,1.3498495759221,0.988866362566974,1.4209602298922,0.599200221036809,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,2.31891590961342,3.44169550792555,0,0,0,0,0.280888840263504,0.681721290312231,0.779358013808606,0,0,0,0,0,2.38140145112336,1.52015919285059,2.02209778005913,0.34255163915718,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.904335843315735,0.587943535678524,0.628332956648377,0.247194967734374,1.15679485535929,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.248813941220186,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.350296027101508,0.493679549740441,0.164167464079095,0.162137619091711,0.438599962275997,0.219550115291051,0.671032093801859,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.58489226135736,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.631222379012867,0.822074982615345,1.03327103585722,1.255989822731,1.35736880313981,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,1.01031551178845,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,0.655453258862952,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.301564624640779,0,0.328281799490123,0.582961673259701,0,0.341741761595705,0,0,0,0.410082683163076,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.330613822901344,0.523511883968059,0.129614973291793,0,0.56369293868419,0.448549638131936,0,0,0.129159823477731,0,0,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.643105137237198,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.191288332068843,0.661774257358546,0 | ||
|short_description=p@chr5:77784612..77784627,- | |short_description=p@chr5:77784612..77784627,- | ||
}} | }} |
Latest revision as of 15:23, 4 August 2015
Short description: | p@chr5:77784612..77784627, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77784612..77784627, - |
Coexpression cluster: | MCL_coexpression_mm9:850 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.81e-18 | 7 |
cardiocyte | 1.28e-16 | 3 |
striated muscle cell | 1.28e-16 | 3 |
cardiac muscle cell | 1.28e-16 | 3 |
cardiac muscle myoblast | 1.28e-16 | 3 |
duct epithelial cell | 6.53e-16 | 3 |
epithelial cell of tracheobronchial tree | 6.53e-16 | 3 |
branched duct epithelial cell | 6.53e-16 | 3 |
epithelial cell of lower respiratory tract | 6.53e-16 | 3 |
respiratory epithelial cell | 6.53e-16 | 3 |
tracheal epithelial cell | 6.53e-16 | 3 |
tracheoblast | 6.53e-16 | 3 |
muscle precursor cell | 3.88e-14 | 6 |
muscle cell | 3.88e-14 | 6 |
myoblast | 3.88e-14 | 6 |
multi-potent skeletal muscle stem cell | 1.77e-09 | 9 |
bone marrow cell | 1.65e-07 | 3 |
mesenchymal stem cell of the bone marrow | 1.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.53e-16 | 3 |
respiratory airway | 6.53e-16 | 3 |
tracheobronchial tree | 6.53e-16 | 3 |
lower respiratory tract | 6.53e-16 | 3 |
skeletal muscle tissue | 1.77e-09 | 9 |
striated muscle tissue | 1.77e-09 | 9 |
muscle tissue | 1.77e-09 | 9 |
multilaminar epithelium | 1.77e-09 | 9 |
epithelial vesicle | 1.77e-09 | 9 |
musculature | 1.77e-09 | 9 |
somite | 1.77e-09 | 9 |
myotome | 1.77e-09 | 9 |
presomitic mesoderm | 1.77e-09 | 9 |
presumptive segmental plate | 1.77e-09 | 9 |
dermomyotome | 1.77e-09 | 9 |
trunk paraxial mesoderm | 1.77e-09 | 9 |
vessel | 2.07e-09 | 5 |
epithelial tube open at both ends | 2.07e-09 | 5 |
blood vessel | 2.07e-09 | 5 |
vasculature | 2.07e-09 | 5 |
vascular system | 2.07e-09 | 5 |
blood vasculature | 2.07e-09 | 5 |
vascular cord | 2.07e-09 | 5 |
musculature of body | 1.53e-08 | 10 |
compound organ | 2.30e-08 | 43 |
dense mesenchyme tissue | 8.94e-08 | 11 |
paraxial mesoderm | 8.94e-08 | 11 |
presumptive paraxial mesoderm | 8.94e-08 | 11 |
cardiovascular system | 1.38e-07 | 23 |
circulatory system | 1.38e-07 | 23 |
trunk | 1.69e-07 | 90 |
splanchnic layer of lateral plate mesoderm | 8.31e-07 | 33 |
mesenchyme | 8.41e-07 | 61 |
entire embryonic mesenchyme | 8.41e-07 | 61 |