FFCP PHASE1:Mm9::chr13:94541611..94541657,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11881 | |EntrezGene=11881 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P50429 | |UniProt=P50429 | ||
|association_with_transcript=0bp_to_ENSMUST00000091403,NM_009712,uc007rlo.1,uc011zcv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000091403,NM_009712,uc007rlo.1,uc011zcv.1_5end | ||
|cluster_id=chr13:94541611..94541657,+ | |||
|description=CAGE_peak_1_at_Arsb_5end | |description=CAGE_peak_1_at_Arsb_5end | ||
|id=chr13:94541611..94541657,+ | |id=chr13:94541611..94541657,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.65e-09!50;UBERON:0006238!1.65e-09!50;UBERON:0002616!5.39e-09!49;UBERON:0001049!1.99e-08!52;UBERON:0005068!1.99e-08!52;UBERON:0006241!1.99e-08!52;UBERON:0007135!1.99e-08!52;UBERON:0004111!4.06e-08!122;UBERON:0000033!4.75e-08!63;UBERON:0002346!1.74e-07!71;UBERON:0003075!1.74e-07!71;UBERON:0007284!1.74e-07!71;UBERON:0001017!1.83e-07!73;UBERON:0005743!1.83e-07!73;UBERON:0000025!2.12e-07!114;UBERON:0000475!3.72e-07!200;UBERON:0002021!5.47e-07!10;UBERON:0000411!5.47e-07!10;UBERON:0001950!5.47e-07!10;UBERON:0004121!6.44e-07!102;UBERON:0000924!6.44e-07!102;UBERON:0006601!6.44e-07!102;UBERON:0000073!9.51e-07!75;UBERON:0001016!9.51e-07!75 | |ontology_enrichment_uberon=UBERON:0000955!1.65e-09!50;UBERON:0006238!1.65e-09!50;UBERON:0002616!5.39e-09!49;UBERON:0001049!1.99e-08!52;UBERON:0005068!1.99e-08!52;UBERON:0006241!1.99e-08!52;UBERON:0007135!1.99e-08!52;UBERON:0004111!4.06e-08!122;UBERON:0000033!4.75e-08!63;UBERON:0002346!1.74e-07!71;UBERON:0003075!1.74e-07!71;UBERON:0007284!1.74e-07!71;UBERON:0001017!1.83e-07!73;UBERON:0005743!1.83e-07!73;UBERON:0000025!2.12e-07!114;UBERON:0000475!3.72e-07!200;UBERON:0002021!5.47e-07!10;UBERON:0000411!5.47e-07!10;UBERON:0001950!5.47e-07!10;UBERON:0004121!6.44e-07!102;UBERON:0000924!6.44e-07!102;UBERON:0006601!6.44e-07!102;UBERON:0000073!9.51e-07!75;UBERON:0001016!9.51e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.29e-09,54;UBERON:0001049,1.98e-08,52;UBERON:0005068,1.98e-08,52;UBERON:0006241,1.98e-08,52;UBERON:0007135,1.98e-08,52;UBERON:0000955,2.03e-08,47;UBERON:0006238,2.03e-08,47;UBERON:0004111,4.04e-08,122;UBERON:0002616,6.31e-08,46;UBERON:0001017,1.82e-07,73;UBERON:0000025,2.11e-07,114;UBERON:0002021,5.46e-07,10;UBERON:0000411,5.46e-07,10;UBERON:0001950,5.46e-07,10;UBERON:0001016,9.48e-07,75 | |||
|phase1_expression=8.48788889655408,0.348975407639361,0.454999239389536,0,0.500895729946347,1.6787927191189,0.934450562382103,1.42035655785734,1.267098499365,0,0.513653904676515,0.159544317990673,9.92964233600993,1.31130603628496,3.66420737997229,3.03712901084739,1.39912375625629,4.25873923233621,4.11343300817216,3.81950686618227,11.1406710097901,6.35462087685666,3.91799683708403,1.91990907352088,0.91763712426868,0,0.86152399231815,0.861884930743556,0.760093677825496,2.01624103807945,1.55211357458713,0,0,0,5.77703239502549,7.48055904113216,6.32925004413344,0.837063261473815,0,2.09409497589519,2.94115744015507,0.683045484958446,0.485510353031154,26.816022228798,30.4130793658544,22.0256102594018,19.559783608701,12.6454590700659,19.1126978978991,22.5538682926169,21.2779360870551,7.18762821824858,1.67782606057736,5.07753499407941,3.6970317905671,9.00408026125814,16.9054729563866,6.18806510732931,5.86717736492834,5.28990979272033,6.33831403506179,12.5372476865579,11.5608323494448,10.3488467487361,8.89979726310277,9.9467216092454,19.4740071836963,24.974189845901,4.97710139080693,5.67024940993101,3.57552434297349,11.1403883917483,12.3686382932904,3.55223317723367,3.92966431174769,4.5960939330501,17.6185409599022,15.8332299225633,17.664751324468,3.95658863190582,4.94033275453012,5.2091337055676,13.6799669510677,18.5711661310454,18.7941844765476,11.490514833473,8.25755748634797,4.65998614563251,1.81742863999642,5.06329452715463,9.56552812715537,8.60423876981386,7.47968467078526,14.5719861742211,14.2950811838487,12.5447528387254,8.70755404816862,23.0080935480378,15.3273742715693,14.1335829804136,5.21120653173718,24.3820307087204,10.1922095882658,0,6.061749148314,5.57391704045217,5.05524445014783,4.5673551887624,15.5362730188303,21.2272258862699,5.89850111004862,7.61163695780353,12.2226213545711,8.74191315205211,12.1116368349776,27.6466500925286,3.70792451601561,16.9181247596297,5.30766331169925,18.7649545938995,11.7046004784009,7.27312879702833,5.59175283654366,24.8863677459815,20.9446706813455,4.85368404896324,3.23500836165985,3.59941638596045,4.19331749341113,26.5129431746536,16.0125210986519,6.03140890141749,35.807809959609,32.2201476236216,18.2853479212413,23.3627418817571,17.0071737630028,12.8139179728396,12.1306924048164,10.1012090825508,4.81445638962004,5.28774840196988,6.12211241338187,5.57607825992146,7.89223390155403,6.66191345481219,8.99536555773397,12.1590584247337,7.11374376678379,6.24050064553804,10.0292140773451,10.9597866213787,7.22922847986555,6.96504333044333,8.64284972913362,9.55364480728767,2.80885274925294,3.08817488537658,4.54661599032948,3.52113813310353,3.98694301967864,4.32148947506436,6.15536312521547,5.70616272067471,5.55361606394562,6.27841650826101,4.56064782379353,5.83826711835847,6.25327429671226,7.05920095540109,7.05298643048945,4.9707995724613,6.58650345873152,7.64976586934119,37.4316108444146,8.95270127699774,4.95628174475697,0.793351699990633,5.11891801284562,5.10920678092965,6.95884291139304,7.26060688644033,6.89371935919098,8.56015317506516,6.64340686162316,6.25856027951241,10.304743560811,11.1415624343044,11.6978452271472,8.98819408654222,5.61958929674205,7.56736838366595,5.50036912763937,7.08340778180319,10.1436962105772,6.10953983535943,7.95205197387266,9.39819986530269,20.4886380282594,21.4034714570423,20.7238320750615,21.8412980141587,13.0439155918346,2.33583148002532,3.14494392181125,4.49724224769707,2.43432145666204,2.17059443777175,4.32863948028414,3.74004978686054,2.7562988551756,7.96228098245436,11.5014565221884,9.67566463938109,13.4176199439261,14.6495749209325,16.325164630494,10.6137574699941,9.42241269849684,3.7898282354097,9.77789858652155,8.82674446030978,10.0916806764056,6.365237782789,6.66522194480839,5.85400943573396,11.0344600874334,10.1873757238436,9.72674088810671,7.04612253277673,12.4333186943445,9.69148692496127,3.01582567878545,4.35124547054968,14.2611639175521,13.2449638226272,21.8348802383397,23.9111840648094,12.9508606847574,8.33154059774431,5.36363973007636,5.0757036758563,3.87762115919038,4.30143836314594,4.67877215573028,3.96307143104365,6.47697122679831,7.01414058987149,4.34816555741176,26.3483479465882,18.1683309066584,16.025904330053,16.125808976004,16.1670720513085,15.9294166007955,6.06951590387454,9.06970670894253,9.8074641473067,10.335566250827,13.5271465095328,15.247269296925,19.2672876623078,14.2598951353889,23.7027568451862,17.9211634577498,37.1287955693473,33.3630813638712,3.78128297465751,4.01011919726539,8.78781843629528,8.6896714484714,9.27517851530767,11.8475294833527,10.656273219011,5.39744928546534,10.8034356140548,14.3343458735725,9.72828892354732,9.20347232166662,7.59942854094764,5.61050016814741,4.59594519286172,8.16146342563582,19.4696567111035,3.07567585436135,4.74689796315412,2.96311243791539,2.63715839806567,4.51090951479383,5.0331198105435,6.96911562974807,5.87796099759364,4.97519905695926,5.72802370809068,5.69404788446044,8.94605655358134,7.88438987999149,6.48173717644853,8.7345025498471,8.22672512947406,11.4888303458217,13.3495530411855,14.1280320888054,16.776161453347,0.56369293868419,4.18646328923141,5.79104716599842,9.91701060554643,10.7202653486517,8.95467465101124,13.6134396829075,10.1559420178281,5.87212328783981,2.65742532908607,2.88030006257865,0.948033361884535,5.47358081283443,4.93012594391171,4.67714962720062,3.04345382634718,3.17890167650024,1.56254084375959,4.13530676088816,2.1202954489111,1.98137697303,1.61321896218945,3.11865218367208,1.92423683280659,1.63627663054197,5.66825959038028,4.66170502085536,1.52513556236109,2.01461539636894,13.9096507703177,15.7653279378993,12.0880072016395,6.00231461421384,25.0786052017682,24.8490810751509,23.476587061866,25.2074025913335,36.9484342038928,20.5524755931193,19.6402413321322,16.8755625057951,26.1186297870048,19.4851235863208,32.1011393286128,0.726511433089237,4.78829848081237,6.4878770186571,9.72426868273176,3.35381060204772,2.94149613520023,7.11189528965169,7.82933217507798,7.06022261101994,10.6132828940795,9.37873409593887,7.35642731405697,9.27050923951836,9.21962194630118,10.7404326946997,5.71552429539688,9.96605203125757,8.29509647993932,8.24171801606613,8.39033844766065,9.25746981440622,8.34136288948886,9.29901140794552,6.83128158171944,8.75217237862575,10.5768259864596,11.3415343181119,5.78753365163254,7.4692262615224,7.85599180320834,9.84670650430645,10.4414751318097,5.72923460437565,8.83139994760006,8.48789088317022,10.2422336954558,9.12333272937093,9.66919743217342,11.8598765882683,13.0148937280514,11.3615239454007 | |phase1_expression=8.48788889655408,0.348975407639361,0.454999239389536,0,0.500895729946347,1.6787927191189,0.934450562382103,1.42035655785734,1.267098499365,0,0.513653904676515,0.159544317990673,9.92964233600993,1.31130603628496,3.66420737997229,3.03712901084739,1.39912375625629,4.25873923233621,4.11343300817216,3.81950686618227,11.1406710097901,6.35462087685666,3.91799683708403,1.91990907352088,0.91763712426868,0,0.86152399231815,0.861884930743556,0.760093677825496,2.01624103807945,1.55211357458713,0,0,0,5.77703239502549,7.48055904113216,6.32925004413344,0.837063261473815,0,2.09409497589519,2.94115744015507,0.683045484958446,0.485510353031154,26.816022228798,30.4130793658544,22.0256102594018,19.559783608701,12.6454590700659,19.1126978978991,22.5538682926169,21.2779360870551,7.18762821824858,1.67782606057736,5.07753499407941,3.6970317905671,9.00408026125814,16.9054729563866,6.18806510732931,5.86717736492834,5.28990979272033,6.33831403506179,12.5372476865579,11.5608323494448,10.3488467487361,8.89979726310277,9.9467216092454,19.4740071836963,24.974189845901,4.97710139080693,5.67024940993101,3.57552434297349,11.1403883917483,12.3686382932904,3.55223317723367,3.92966431174769,4.5960939330501,17.6185409599022,15.8332299225633,17.664751324468,3.95658863190582,4.94033275453012,5.2091337055676,13.6799669510677,18.5711661310454,18.7941844765476,11.490514833473,8.25755748634797,4.65998614563251,1.81742863999642,5.06329452715463,9.56552812715537,8.60423876981386,7.47968467078526,14.5719861742211,14.2950811838487,12.5447528387254,8.70755404816862,23.0080935480378,15.3273742715693,14.1335829804136,5.21120653173718,24.3820307087204,10.1922095882658,0,6.061749148314,5.57391704045217,5.05524445014783,4.5673551887624,15.5362730188303,21.2272258862699,5.89850111004862,7.61163695780353,12.2226213545711,8.74191315205211,12.1116368349776,27.6466500925286,3.70792451601561,16.9181247596297,5.30766331169925,18.7649545938995,11.7046004784009,7.27312879702833,5.59175283654366,24.8863677459815,20.9446706813455,4.85368404896324,3.23500836165985,3.59941638596045,4.19331749341113,26.5129431746536,16.0125210986519,6.03140890141749,35.807809959609,32.2201476236216,18.2853479212413,23.3627418817571,17.0071737630028,12.8139179728396,12.1306924048164,10.1012090825508,4.81445638962004,5.28774840196988,6.12211241338187,5.57607825992146,7.89223390155403,6.66191345481219,8.99536555773397,12.1590584247337,7.11374376678379,6.24050064553804,10.0292140773451,10.9597866213787,7.22922847986555,6.96504333044333,8.64284972913362,9.55364480728767,2.80885274925294,3.08817488537658,4.54661599032948,3.52113813310353,3.98694301967864,4.32148947506436,6.15536312521547,5.70616272067471,5.55361606394562,6.27841650826101,4.56064782379353,5.83826711835847,6.25327429671226,7.05920095540109,7.05298643048945,4.9707995724613,6.58650345873152,7.64976586934119,37.4316108444146,8.95270127699774,4.95628174475697,0.793351699990633,5.11891801284562,5.10920678092965,6.95884291139304,7.26060688644033,6.89371935919098,8.56015317506516,6.64340686162316,6.25856027951241,10.304743560811,11.1415624343044,11.6978452271472,8.98819408654222,5.61958929674205,7.56736838366595,5.50036912763937,7.08340778180319,10.1436962105772,6.10953983535943,7.95205197387266,9.39819986530269,20.4886380282594,21.4034714570423,20.7238320750615,21.8412980141587,13.0439155918346,2.33583148002532,3.14494392181125,4.49724224769707,2.43432145666204,2.17059443777175,4.32863948028414,3.74004978686054,2.7562988551756,7.96228098245436,11.5014565221884,9.67566463938109,13.4176199439261,14.6495749209325,16.325164630494,10.6137574699941,9.42241269849684,3.7898282354097,9.77789858652155,8.82674446030978,10.0916806764056,6.365237782789,6.66522194480839,5.85400943573396,11.0344600874334,10.1873757238436,9.72674088810671,7.04612253277673,12.4333186943445,9.69148692496127,3.01582567878545,4.35124547054968,14.2611639175521,13.2449638226272,21.8348802383397,23.9111840648094,12.9508606847574,8.33154059774431,5.36363973007636,5.0757036758563,3.87762115919038,4.30143836314594,4.67877215573028,3.96307143104365,6.47697122679831,7.01414058987149,4.34816555741176,26.3483479465882,18.1683309066584,16.025904330053,16.125808976004,16.1670720513085,15.9294166007955,6.06951590387454,9.06970670894253,9.8074641473067,10.335566250827,13.5271465095328,15.247269296925,19.2672876623078,14.2598951353889,23.7027568451862,17.9211634577498,37.1287955693473,33.3630813638712,3.78128297465751,4.01011919726539,8.78781843629528,8.6896714484714,9.27517851530767,11.8475294833527,10.656273219011,5.39744928546534,10.8034356140548,14.3343458735725,9.72828892354732,9.20347232166662,7.59942854094764,5.61050016814741,4.59594519286172,8.16146342563582,19.4696567111035,3.07567585436135,4.74689796315412,2.96311243791539,2.63715839806567,4.51090951479383,5.0331198105435,6.96911562974807,5.87796099759364,4.97519905695926,5.72802370809068,5.69404788446044,8.94605655358134,7.88438987999149,6.48173717644853,8.7345025498471,8.22672512947406,11.4888303458217,13.3495530411855,14.1280320888054,16.776161453347,0.56369293868419,4.18646328923141,5.79104716599842,9.91701060554643,10.7202653486517,8.95467465101124,13.6134396829075,10.1559420178281,5.87212328783981,2.65742532908607,2.88030006257865,0.948033361884535,5.47358081283443,4.93012594391171,4.67714962720062,3.04345382634718,3.17890167650024,1.56254084375959,4.13530676088816,2.1202954489111,1.98137697303,1.61321896218945,3.11865218367208,1.92423683280659,1.63627663054197,5.66825959038028,4.66170502085536,1.52513556236109,2.01461539636894,13.9096507703177,15.7653279378993,12.0880072016395,6.00231461421384,25.0786052017682,24.8490810751509,23.476587061866,25.2074025913335,36.9484342038928,20.5524755931193,19.6402413321322,16.8755625057951,26.1186297870048,19.4851235863208,32.1011393286128,0.726511433089237,4.78829848081237,6.4878770186571,9.72426868273176,3.35381060204772,2.94149613520023,7.11189528965169,7.82933217507798,7.06022261101994,10.6132828940795,9.37873409593887,7.35642731405697,9.27050923951836,9.21962194630118,10.7404326946997,5.71552429539688,9.96605203125757,8.29509647993932,8.24171801606613,8.39033844766065,9.25746981440622,8.34136288948886,9.29901140794552,6.83128158171944,8.75217237862575,10.5768259864596,11.3415343181119,5.78753365163254,7.4692262615224,7.85599180320834,9.84670650430645,10.4414751318097,5.72923460437565,8.83139994760006,8.48789088317022,10.2422336954558,9.12333272937093,9.66919743217342,11.8598765882683,13.0148937280514,11.3615239454007 | ||
|short_description=p1@Arsb | |short_description=p1@Arsb | ||
}} | }} |
Latest revision as of 13:30, 25 September 2015
Short description: | p1@Arsb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arsb_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000091403, NM_009712, uc007rlo.1, uc011zcv.1_5end |
EntrezGene: | Arsb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.29e-09 | 54 |
neural tube | 1.98e-08 | 52 |
neural rod | 1.98e-08 | 52 |
future spinal cord | 1.98e-08 | 52 |
neural keel | 1.98e-08 | 52 |
brain | 2.03e-08 | 47 |
future brain | 2.03e-08 | 47 |
anatomical conduit | 4.04e-08 | 122 |
regional part of brain | 6.31e-08 | 46 |
central nervous system | 1.82e-07 | 73 |
tube | 2.11e-07 | 114 |
occipital lobe | 5.46e-07 | 10 |
visual cortex | 5.46e-07 | 10 |
neocortex | 5.46e-07 | 10 |
nervous system | 9.48e-07 | 75 |