FFCP PHASE1:Mm9::chr5:138612444..138612474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17220 | |EntrezGene=17220 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000147920_5end | |association_with_transcript=0bp_to_ENSMUST00000147920_5end | ||
|cluster_id=chr5:138612444..138612474,- | |||
|description=CAGE_peak_5_at_Mcm7_5end | |description=CAGE_peak_5_at_Mcm7_5end | ||
|id=chr5:138612444..138612474,- | |id=chr5:138612444..138612474,- | ||
|ontology_enrichment_celltype=CL:0000838!6.16e-07!12 | |ontology_enrichment_celltype=CL:0000838!6.16e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.48e-07,12;CL:0000791,3.53e-07,9;CL:0000789,3.53e-07,9;CL:0002420,3.53e-07,9;CL:0002419,3.53e-07,9;CL:0000790,3.53e-07,9;CL:0000542,3.77e-07,13;CL:0000051,3.77e-07,13;CL:0000084,6.77e-07,11;CL:0000827,6.77e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.99e-13!94;UBERON:0007811!1.59e-12!86;UBERON:0003408!4.88e-08!24;UBERON:0006562!5.14e-08!24;UBERON:0001557!5.14e-08!24;UBERON:0001042!5.14e-08!24;UBERON:0008814!5.14e-08!24;UBERON:0009145!5.14e-08!24;UBERON:0002370!9.21e-08!23;UBERON:0000974!9.21e-08!23;UBERON:0004807!9.21e-08!23;UBERON:0005058!9.21e-08!23;UBERON:0003351!9.21e-08!23;UBERON:0009113!9.21e-08!23;UBERON:0003295!9.21e-08!23;UBERON:0009722!9.21e-08!23;UBERON:0005562!9.21e-08!23;UBERON:0007690!9.21e-08!23;UBERON:0001004!1.07e-07!42;UBERON:0000065!2.00e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,2.07e-09,24;UBERON:0006562,2.20e-09,24;UBERON:0001557,2.20e-09,24;UBERON:0001042,2.20e-09,24;UBERON:0008814,2.20e-09,24;UBERON:0009145,2.20e-09,24;UBERON:0000153,3.91e-09,43;UBERON:0002370,4.20e-09,23;UBERON:0000974,4.20e-09,23;UBERON:0004807,4.20e-09,23;UBERON:0005058,4.20e-09,23;UBERON:0003351,4.20e-09,23;UBERON:0009113,4.20e-09,23;UBERON:0003295,4.20e-09,23;UBERON:0009722,4.20e-09,23;UBERON:0005562,4.20e-09,23;UBERON:0007690,4.20e-09,23;UBERON:0001004,4.93e-09,42;UBERON:0007811,5.20e-09,36;UBERON:0000065,9.97e-09,41;UBERON:0000072,3.20e-07,27;UBERON:0004177,3.96e-07,29;UBERON:0005057,3.96e-07,29;UBERON:0000077,6.67e-07,35 | |||
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|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0.233612640595526,5.81054955487093,4.08287294239834,2.80877431586392,4.62288514208863,2.39316476986009,7.36163138704185,5.50748535239684,0.666219523631325,1.41732687172878,2.79824751251259,5.20512572841092,6.17014951225825,2.12194825899015,1.36069264241712,1.39007331681239,1.30599894569468,0.319984845586813,0,0,0,0.861884930743556,0.570070258369122,0,0,1.27006134691926,0.61506478758457,0,1.73310971850765,0.332469290716985,0.612508068787107,0.418531630736908,0,0.523523743973798,1.76469446409304,1.36609096991689,0.485510353031154,1.76255545165808,1.82478476195126,0.917733760808408,0,0.436050312760893,0.219686182734472,0.58328969722285,0.55994568650145,0,4.19456515144341,2.90144856804538,4.03312558970957,0.257259436035947,0.573066879877513,0.515672092277442,2.83243045203437,1.05798195854407,3.1691570175309,0,0.889294796111139,0,0,0,0,0,4.14758449233911,3.51015439662396,2.52389953621658,0.571301968807607,1.32521124570968,3.06226998037385,5.07980996396653,1.83843757322004,5.50579404996943,1.53224805702225,1.38245879930619,1.05509030184155,2.01272815925301,5.2091337055676,1.11673199600552,0.56276261003168,2.13917546887534,0.294628585473668,1.13897344639282,1.4911955666024,0.454357159999104,0.529000920747499,2.31891590961342,0.860423876981386,0.679971333707751,0,0,0.896053774194671,0.561777680527007,0.170430322578058,0.519572009205738,0.70667914902068,1.12674735821344,1.28326477414318,0,0,0,0,0.505524445014783,0.68510327831436,2.84831672011889,1.33597925158342,0.173485326766136,0,0.461230994512117,0.904335843315735,1.29347577849275,1.25666591329675,0.988779870937496,1.59059292611903,0.884610551949874,0.485300549842228,1.32504911076236,0,1.86391761218122,0.878342391034642,2.09446706813455,0.255457055208591,1.67741174308288,1.19980546198682,1.14363204365758,1.9472783122627,2.28750301409313,2.89005009859588,1.39059456153821,3.06858548796397,1.0389402227978,0.973447578406546,1.42575109390443,0.622034853050465,0,0.420883711772948,0.650602214813519,1.60931473103431,0.540186389416048,1.80845781402858,1.76894897793452,2.0498195245576,1.59292931751539,2.06962696591213,1.29340795759705,1.32374256117473,3.16712023495108,1.09597866213787,1.11218899690239,1.0447564995665,1.23469281844766,0.995171334092466,0,0.257347907114715,0.852490498186778,1.24275463521301,0,0.540186184383045,0.946978942340841,0.983821158737019,0.462801338662135,0.232533944750408,0.804820204198858,1.28441876603886,0.987359099480883,1.80584210487005,1.13496333364198,1.16959989940266,0.439100230582101,1.34206418760372,1.68231958851302,2.98423375899925,0.660837565967596,0.528901133327089,1.06644125267617,0.696710015581316,1.28867461322093,0.605050573870028,0.444756087689741,0.951128130562796,0,0.329397909448022,2.01068167040216,0.596869416123452,0.974820435595601,1.79763881730844,1.08069024937347,0.796565093017469,0.948339504765408,1.02823661348756,0,0.814605311381257,0.581857461502877,1.1221731182451,0.948548056863859,1.62371162777562,0.627994911365499,0.987177311374404,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,0.863088412352432,0.648540907100142,0,0,0.372140947668503,0,0,0.179397413521912,1.4473305640901,2.77129785249907,1.32643988239339,0.977789858652155,1.86719594352707,0.704070744865506,1.34005005953453,0.476087281772027,2.14647012643579,3.15270288212382,1.32878813789265,2.23236676120482,1.96635977658886,2.07221978239075,2.02508682014116,0,0,0.983528546038072,1.37968373152366,2.40825884981688,0.703270119553219,0.163934945376675,1.00988370881749,0.631016438832513,0,1.50796378412959,0.955875191810208,1.33679204449436,2.83076530788832,0.404810701674894,0,1.18586333383957,5.46246237917072,2.12910127812403,1.95872164033981,1.46598263418218,1.64970122972535,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,1.03371317267288,1.09060118843252,0.356497378384721,1.58018378967908,0,2.06271086496374,1.36175842301515,1.8006109403131,1.68166288917581,0.857348140126369,1.95074257006501,1.78368817602071,1.81003922662333,0.913394847343798,0.23467170806371,1.69465656691056,1.10264199027481,2.96795255294664,1.93757312035087,1.02531972377865,1.3130957840345,0.984845398470368,1.45740418314925,0.556275906031529,0.854354403989263,1.23832120777933,0.555583582109135,1.50694765603753,1.36694227721025,0.915112692826091,1.86976272993241,1.81936888020755,2.3493995546752,1.90934123603023,1.26534397432454,1.01659733563424,0.540026704109006,0.836353184057875,0.436725127492355,0.674321731924103,0.661227645802687,1.57053565190418,0.777689839750757,1.86401793926078,0,1.64468200648377,1.15820943319968,1.36115831840833,1.03327858782185,1.18269287843545,1.05621514781179,1.17183946359555,1.36317147753424,0.483168241652012,1.15212002503146,7.2682557744481,0.608175645870493,1.33524244314275,2.20865399062252,1.61124026100733,3.17890167650024,4.68762253127878,4.13530676088816,3.83672509802961,4.26758117267999,3.528916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| ||
|short_description=p5@Mcm7 | |short_description=p5@Mcm7 | ||
}} | }} |
Latest revision as of 15:16, 25 September 2015
Short description: | p5@Mcm7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mcm7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000147920_5end |
EntrezGene: | Mcm7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.48e-07 | 12 |
mature alpha-beta T cell | 3.53e-07 | 9 |
alpha-beta T cell | 3.53e-07 | 9 |
immature T cell | 3.53e-07 | 9 |
mature T cell | 3.53e-07 | 9 |
immature alpha-beta T cell | 3.53e-07 | 9 |
lymphocyte | 3.77e-07 | 13 |
common lymphoid progenitor | 3.77e-07 | 13 |
T cell | 6.77e-07 | 11 |
pro-T cell | 6.77e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 2.07e-09 | 24 |
pharynx | 2.20e-09 | 24 |
upper respiratory tract | 2.20e-09 | 24 |
chordate pharynx | 2.20e-09 | 24 |
pharyngeal arch system | 2.20e-09 | 24 |
pharyngeal region of foregut | 2.20e-09 | 24 |
anterior region of body | 3.91e-09 | 43 |
thymus | 4.20e-09 | 23 |
neck | 4.20e-09 | 23 |
respiratory system epithelium | 4.20e-09 | 23 |
hemolymphoid system gland | 4.20e-09 | 23 |
pharyngeal epithelium | 4.20e-09 | 23 |
thymic region | 4.20e-09 | 23 |
pharyngeal gland | 4.20e-09 | 23 |
entire pharyngeal arch endoderm | 4.20e-09 | 23 |
thymus primordium | 4.20e-09 | 23 |
early pharyngeal endoderm | 4.20e-09 | 23 |
respiratory system | 4.93e-09 | 42 |
craniocervical region | 5.20e-09 | 36 |
respiratory tract | 9.97e-09 | 41 |
segment of respiratory tract | 3.20e-07 | 27 |
hemopoietic organ | 3.96e-07 | 29 |
immune organ | 3.96e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 6.67e-07 | 35 |