FFCP PHASE1:Mm9::chr16:36828450..36828520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320299 | |EntrezGene=320299 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2179 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BP00 | |UniProt=Q8BP00 | ||
|association_with_transcript=0bp_to_ENSMUST00000023535,ENSMUST00000114819,ENSMUST00000146272,NM_177128,uc007zda.1,uc007zdb.2_5end | |association_with_transcript=0bp_to_ENSMUST00000023535,ENSMUST00000114819,ENSMUST00000146272,NM_177128,uc007zda.1,uc007zdb.2_5end | ||
|cluster_id=chr16:36828450..36828520,+ | |||
|description=CAGE_peak_1_at_Iqcb1_5end | |description=CAGE_peak_1_at_Iqcb1_5end | ||
|id=chr16:36828450..36828520,+ | |id=chr16:36828450..36828520,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.79e-11!63;UBERON:0000153!4.85e-11!94;UBERON:0003056!1.27e-09!49;UBERON:0002346!3.48e-09!71;UBERON:0003075!3.48e-09!71;UBERON:0007284!3.48e-09!71;UBERON:0007811!3.56e-09!86;UBERON:0000955!3.42e-08!50;UBERON:0006238!3.42e-08!50;UBERON:0002616!9.95e-08!49;UBERON:0001049!5.68e-07!52;UBERON:0005068!5.68e-07!52;UBERON:0006241!5.68e-07!52;UBERON:0007135!5.68e-07!52;UBERON:0000991!9.58e-07!18;UBERON:0005564!9.58e-07!18 | |ontology_enrichment_uberon=UBERON:0000033!3.79e-11!63;UBERON:0000153!4.85e-11!94;UBERON:0003056!1.27e-09!49;UBERON:0002346!3.48e-09!71;UBERON:0003075!3.48e-09!71;UBERON:0007284!3.48e-09!71;UBERON:0007811!3.56e-09!86;UBERON:0000955!3.42e-08!50;UBERON:0006238!3.42e-08!50;UBERON:0002616!9.95e-08!49;UBERON:0001049!5.68e-07!52;UBERON:0005068!5.68e-07!52;UBERON:0006241!5.68e-07!52;UBERON:0007135!5.68e-07!52;UBERON:0000991!9.58e-07!18;UBERON:0005564!9.58e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.21e-10,64;UBERON:0003075,2.21e-10,64;UBERON:0007284,2.21e-10,64;UBERON:0003056,1.27e-09,49;UBERON:0010371,2.28e-09,73;UBERON:0000073,1.90e-07,54;UBERON:0000955,3.12e-07,47;UBERON:0006238,3.12e-07,47;UBERON:0004121,4.13e-07,95;UBERON:0000924,4.13e-07,95;UBERON:0006601,4.13e-07,95;UBERON:0010314,4.96e-07,92;UBERON:0001049,5.81e-07,52;UBERON:0005068,5.81e-07,52;UBERON:0006241,5.81e-07,52;UBERON:0007135,5.81e-07,52;UBERON:0002616,8.68e-07,46;UBERON:0000991,9.57e-07,18;UBERON:0005564,9.57e-07,18 | |||
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| ||
|short_description=p1@Iqcb1 | |short_description=p1@Iqcb1 | ||
}} | }} |
Latest revision as of 23:22, 1 October 2015
Short description: | p1@Iqcb1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Iqcb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2179 |
Association with transcript: | 0bp_to_ENSMUST00000023535, ENSMUST00000114819, ENSMUST00000146272, NM_177128, uc007zda.1, uc007zdb.2_5end |
EntrezGene: | Iqcb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.21e-10 | 64 |
neural plate | 2.21e-10 | 64 |
presumptive neural plate | 2.21e-10 | 64 |
pre-chordal neural plate | 1.27e-09 | 49 |
ecto-epithelium | 2.28e-09 | 73 |
regional part of nervous system | 1.90e-07 | 54 |
brain | 3.12e-07 | 47 |
future brain | 3.12e-07 | 47 |
ectoderm-derived structure | 4.13e-07 | 95 |
ectoderm | 4.13e-07 | 95 |
presumptive ectoderm | 4.13e-07 | 95 |
structure with developmental contribution from neural crest | 4.96e-07 | 92 |
neural tube | 5.81e-07 | 52 |
neural rod | 5.81e-07 | 52 |
future spinal cord | 5.81e-07 | 52 |
neural keel | 5.81e-07 | 52 |
regional part of brain | 8.68e-07 | 46 |
gonad | 9.57e-07 | 18 |
gonad primordium | 9.57e-07 | 18 |