FF:10624-108H3: Difference between revisions

Revision as of 19:30, 9 July 2012

Name:	granulosa cell tumor cell line:KGN
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	ovary
dev stage	NA
sex	female
age	69
cell type	granulosa cell
cell line	KGN
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.271
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.396
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0031
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0744
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0836
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.145
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.155
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.1
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.647
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0522
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0637
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.177
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.111
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	-0.00929
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.269
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.36
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.498
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.525
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11740

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0636
MA0003.1	MA0003.1	0.206
MA0004.1	MA0004.1	0.0164
MA0006.1	MA0006.1	0.512
MA0007.1	MA0007.1	0.386
MA0009.1	MA0009.1	0.0244
MA0014.1	MA0014.1	0.416
MA0017.1	MA0017.1	0.00268
MA0018.2	MA0018.2	7.33118e-4
MA0019.1	MA0019.1	0.364
MA0024.1	MA0024.1	0.848
MA0025.1	MA0025.1	7.51882e-4
MA0027.1	MA0027.1	0.8
MA0028.1	MA0028.1	1.27045e-4
MA0029.1	MA0029.1	0.243
MA0030.1	MA0030.1	0.311
MA0031.1	MA0031.1	0.354
MA0035.2	MA0035.2	0.354
MA0038.1	MA0038.1	0.268
MA0039.2	MA0039.2	0.0663
MA0040.1	MA0040.1	0.505
MA0041.1	MA0041.1	0.477
MA0042.1	MA0042.1	0.511
MA0043.1	MA0043.1	1.05496e-4
MA0046.1	MA0046.1	0.572
MA0047.2	MA0047.2	0.251
MA0048.1	MA0048.1	0.614
MA0050.1	MA0050.1	0.623
MA0051.1	MA0051.1	0.0765
MA0052.1	MA0052.1	0.351
MA0055.1	MA0055.1	0.271
MA0057.1	MA0057.1	0.91
MA0058.1	MA0058.1	6.20615e-4
MA0059.1	MA0059.1	0.0849
MA0060.1	MA0060.1	0.11
MA0061.1	MA0061.1	0.00107
MA0062.2	MA0062.2	1.19327e-11
MA0065.2	MA0065.2	8.40474e-4
MA0066.1	MA0066.1	0.386
MA0067.1	MA0067.1	8.82298e-4
MA0068.1	MA0068.1	0.2
MA0069.1	MA0069.1	0.679
MA0070.1	MA0070.1	0.384
MA0071.1	MA0071.1	0.624
MA0072.1	MA0072.1	0.521
MA0073.1	MA0073.1	0.916
MA0074.1	MA0074.1	0.976
MA0076.1	MA0076.1	3.82939e-6
MA0077.1	MA0077.1	0.0826
MA0078.1	MA0078.1	0.791
MA0079.2	MA0079.2	0.401
MA0080.2	MA0080.2	1.57868e-12
MA0081.1	MA0081.1	4.08274e-5
MA0083.1	MA0083.1	0.0662
MA0084.1	MA0084.1	0.415
MA0087.1	MA0087.1	0.215
MA0088.1	MA0088.1	0.452
MA0090.1	MA0090.1	1.27665e-5
MA0091.1	MA0091.1	0.0832
MA0092.1	MA0092.1	0.598
MA0093.1	MA0093.1	0.0214
MA0099.2	MA0099.2	0.0221
MA0100.1	MA0100.1	0.358
MA0101.1	MA0101.1	0.00735
MA0102.2	MA0102.2	0.00624
MA0103.1	MA0103.1	0.115
MA0104.2	MA0104.2	0.0115
MA0105.1	MA0105.1	1.40266e-4
MA0106.1	MA0106.1	0.974
MA0107.1	MA0107.1	0.0253
MA0108.2	MA0108.2	0.0897
MA0111.1	MA0111.1	0.517
MA0112.2	MA0112.2	0.104
MA0113.1	MA0113.1	0.651
MA0114.1	MA0114.1	0.00182
MA0115.1	MA0115.1	0.146
MA0116.1	MA0116.1	0.00217
MA0117.1	MA0117.1	0.509
MA0119.1	MA0119.1	0.533
MA0122.1	MA0122.1	0.126
MA0124.1	MA0124.1	0.177
MA0125.1	MA0125.1	0.0545
MA0131.1	MA0131.1	0.478
MA0135.1	MA0135.1	0.00431
MA0136.1	MA0136.1	3.14901e-15
MA0137.2	MA0137.2	0.0107
MA0138.2	MA0138.2	0.0881
MA0139.1	MA0139.1	0.131
MA0140.1	MA0140.1	0.82
MA0141.1	MA0141.1	0.713
MA0142.1	MA0142.1	0.74
MA0143.1	MA0143.1	0.18
MA0144.1	MA0144.1	0.0244
MA0145.1	MA0145.1	0.313
MA0146.1	MA0146.1	0.0163
MA0147.1	MA0147.1	0.0266
MA0148.1	MA0148.1	0.375
MA0149.1	MA0149.1	0.362
MA0150.1	MA0150.1	0.0484
MA0152.1	MA0152.1	0.0122
MA0153.1	MA0153.1	0.74
MA0154.1	MA0154.1	0.00716
MA0155.1	MA0155.1	0.413
MA0156.1	MA0156.1	5.80838e-15
MA0157.1	MA0157.1	0.314
MA0159.1	MA0159.1	0.169
MA0160.1	MA0160.1	0.283
MA0162.1	MA0162.1	0.9
MA0163.1	MA0163.1	1.44859e-4
MA0164.1	MA0164.1	0.794
MA0258.1	MA0258.1	0.463
MA0259.1	MA0259.1	0.599

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11740

Novel motif	Logo	P-value
1	1	0.436
10	10	0.157
100	100	0.78
101	101	0.698
102	102	0.199
103	103	0.0651
104	104	0.692
105	105	0.111
106	106	0.233
107	107	0.0485
108	108	0.898
109	109	0.0766
11	11	0.085
110	110	0.45
111	111	0.247
112	112	0.031
113	113	0.0315
114	114	0.947
115	115	0.0304
116	116	0.884
117	117	0.00125
118	118	0.877
119	119	0.808
12	12	0.00551
120	120	0.918
121	121	0.0543
122	122	0.3
123	123	0.793
124	124	0.641
125	125	0.999
126	126	0.276
127	127	0.521
128	128	0.897
129	129	0.0802
13	13	0.105
130	130	0.262
131	131	0.451
132	132	0.832
133	133	0.173
134	134	0.488
135	135	0.963
136	136	0.538
137	137	0.0263
138	138	0.399
139	139	0.188
14	14	0.308
140	140	0.587
141	141	0.167
142	142	0.619
143	143	0.688
144	144	0.65
145	145	0.273
146	146	0.7
147	147	0.0459
148	148	0.398
149	149	0.56
15	15	0.71
150	150	0.947
151	151	0.989
152	152	0.832
153	153	0.181
154	154	0.637
155	155	0.0246
156	156	0.172
157	157	0.296
158	158	0.00156
159	159	0.185
16	16	0.211
160	160	0.638
161	161	0.998
162	162	0.997
163	163	0.44
164	164	0.588
165	165	0.821
166	166	0.00228
167	167	0.684
168	168	0.256
169	169	0.138
17	17	0.79
18	18	0.432
19	19	0.684
2	2	0.97
20	20	0.404
21	21	0.315
22	22	0.0971
23	23	0.574
24	24	0.388
25	25	0.189
26	26	0.704
27	27	0.531
28	28	0.702
29	29	0.431
3	3	0.301
30	30	0.769
31	31	0.535
32	32	6.87189e-5
33	33	0.351
34	34	0.742
35	35	0.418
36	36	0.262
37	37	0.0168
38	38	0.31
39	39	0.493
4	4	0.533
40	40	0.194
41	41	0.721
42	42	0.399
43	43	0.407
44	44	0.32
45	45	0.25
46	46	0.657
47	47	0.236
48	48	0.324
49	49	0.232
5	5	0.92
50	50	0.857
51	51	0.383
52	52	0.848
53	53	0.24
54	54	0.936
55	55	0.692
56	56	0.853
57	57	0.702
58	58	0.079
59	59	0.357
6	6	0.447
60	60	0.217
61	61	0.993
62	62	0.47
63	63	0.713
64	64	0.33
65	65	0.19
66	66	0.964
67	67	0.981
68	68	0.416
69	69	0.848
7	7	0.0951
70	70	0.817
71	71	0.0516
72	72	0.0678
73	73	0.394
74	74	0.0338
75	75	0.0804
76	76	0.0865
77	77	0.664
78	78	0.054
79	79	0.0664
8	8	0.566
80	80	0.0579
81	81	0.595
82	82	0.934
83	83	0.913
84	84	0.657
85	85	0.916
86	86	0.553
87	87	0.894
88	88	0.949
89	89	0.983
9	9	0.0844
90	90	0.42
91	91	0.988
92	92	0.925
93	93	0.727
94	94	0.955
95	95	5.17526e-4
96	96	0.714
97	97	0.42
98	98	0.01
99	99	0.183

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11740

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102285 granulosa cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002078 (meso-epithelial cell)
0000163 (endocrine cell)
0000174 (steroid hormone secreting cell)
0002174 (follicular cell of ovary)
0000255 (eukaryotic cell)
0000501 (granulosa cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0102285 (granulosa cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000222 (mesodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr11:61520075..61520136,+!p1@C11orf9!1.95!182.22!C11orf9;;chr8:11561684..11561751,+!p1@GATA4!1.61!39.97!GATA4;;chr1:197886461..197886558,+!p1@LHX9!1.47!28.79!LHX9;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.46!27.93!ZBED1;;chr6:10415276..10415341,-!p2@TFAP2A!1.45!32.66!TFAP2A;;chr18:19749386..19749404,+!p2@GATA6!1.39!33.09!GATA6;;chr3:138665937..138665968,-!p1@FOXL2!1.33!20.20!FOXL2;;chr11:65686802..65686818,+!p6@DRAP1!1.32!33.95!DRAP1;;chr11:46299199..46299233,+!p1@CREB3L1!1.30!96.70!CREB3L1;;chr11:46299539..46299620,+!p2@CREB3L1!1.23!27.08!CREB3L1;;chr5:134369905..134369972,-!p1@PITX1!1.22!24.07!PITX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.18!23.64!TFAP2A;;chr3:138665969..138665993,-!p2@FOXL2!1.16!13.32!FOXL2;;chr8:106330656..106330684,+!p1@ZFPM2!1.14!33.52!ZFPM2;;chr3:169381420..169381535,-!p1@MECOM!1.13!14.61!MECOM;;chr11:65668011..65668020,-!p3@FOSL1!1.13!12.46!FOSL1;;chr11:65667884..65667895,-!p2@FOSL1!1.11!46.41!FOSL1;;chr20:61051039..61051057,-!p1@GATA5!1.10!11.60!GATA5;;chr20:50179368..50179392,-!p2@NFATC2!1.08!14.18!NFATC2;;chr18:53068911..53068935,-!p4@TCF4!1.07!12.03!TCF4;;chr9:127269661..127269719,-!p1@NR5A1!1.07!10.74!NR5A1;;chr2:19558373..19558392,-!p1@OSR1!1.04!27.93!OSR1;;chr5:134369879..134369898,-!p2@PITX1!1.04!9.88!PITX1;;chr8:106330696..106330719,+!p2@ZFPM2!0.99!11.17!ZFPM2;;chr3:114343768..114343822,-!p1@ZBTB20!0.98!38.68!ZBTB20;;chr15:80843484..80843499,+!p5@ARNT2!0.98!8.60!ARNT2;;chr10:63809013..63809041,+!p3@ARID5B!0.97!47.27!ARID5B;;chr11:31832658..31832681,-!p1@PAX6!0.96!8.17!PAX6;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.96!8.17!SEBOX;;chr18:19749353..19749367,+!p4@GATA6!0.96!8.17!GATA6;;chr6:10415484..10415508,-!p3@TFAP2A!0.94!7.74!TFAP2A;;chr18:19749541..19749557,+!p1@GATA6!0.91!23.21!GATA6;;chr19:45908292..45908374,-!p1@PPP1R13L!0.90!64.89!PPP1R13L;;chr15:67357924..67357952,+!p2@SMAD3!0.90!48.56!SMAD3;;chr7:26191809..26191890,+!p1@NFE2L3!0.90!35.67!NFE2L3;;chr14:73360799..73360817,-!p1@DPF3!0.90!25.36!DPF3;;chr18:19749517..19749531,+!p3@GATA6!0.90!12.89!GATA6;;chr11:65667846..65667868,-!p1@FOSL1!0.89!186.95!FOSL1;;chr12:80085061..80085119,-!p6@PAWR!0.89!11.17!PAWR;;chr6:21597600..21597664,+!p3@SOX4!0.88!11.17!SOX4;;chr12:77459306..77459365,-!p1@E2F7!0.87!84.66!E2F7;;chr7:28448965..28448994,+!p2@CREB5!0.85!22.78!CREB5;;chr7:1577899..1577943,+!p3@MAFK!0.85!6.02!MAFK;;chr5:176738887..176738934,-!p1@MXD3!0.84!42.12!MXD3;;chr11:65686732..65686756,+!p2@DRAP1!0.84!26.65!DRAP1;;chr13:72441315..72441454,-!p1@DACH1!0.84!12.46!DACH1;;chr6:21593973..21593988,+!p1@SOX4!0.83!223.48!SOX4;;chr18:6414884..6414942,-!p1@L3MBTL4!0.83!7.31!L3MBTL4;;chr6:19837592..19837621,+!p1@ID4!0.82!36.96!ID4;;chr5:321810..321877,+!p1@AHRR!0.82!18.91!AHRR;;chr9:4299979..4299996,-!p3@GLIS3!0.82!9.45!GLIS3;;chr12:26277817..26277863,-!p2@BHLHE41!0.82!7.74!BHLHE41;;chr12:54394309..54394336,+!p2@HOXC9!0.82!5.59!HOXC9;;chr19:54058073..54058088,+!p1@ZNF331!0.82!5.59!ZNF331;;chr12:26277956..26277980,-!p1@BHLHE41!0.81!21.06!BHLHE41;;chr19:16435625..16435682,+!p1@KLF2!0.80!183.94!KLF2;;chr15:67418119..67418162,+!p5@SMAD3!0.80!6.02!SMAD3;;chr6:10412576..10412599,-!p5@TFAP2A!0.79!5.16!TFAP2A;;chr9:4300050..4300118,-!p1@GLIS3!0.77!35.24!GLIS3;;chr18:72922811..72922827,+!p1@TSHZ1!0.77!26.65!TSHZ1;;chr7:19157248..19157268,-!p1@TWIST1!0.77!14.61!TWIST1;;chrX:66763815..66763854,+!p2@AR!0.76!6.45!AR;;chr15:80696703..80696754,+!p1@ARNT2!0.75!6.45!ARNT2;;chr13:74708475..74708499,-!p5@KLF12!0.74!11.17!KLF12;;chr6:10412392..10412409,-!p4@TFAP2A!0.74!5.16!TFAP2A;;chrX:128657457..128657475,-!p1@SMARCA1!0.73!56.73!SMARCA1;;chr19:45971246..45971265,+!p1@FOSB!0.72!88.53!FOSB;;chr5:158526917..158526932,-!p1@EBF1!0.72!11.60!EBF1;;chr7:19157043..19157088,-!p2@TWIST1!0.72!11.60!TWIST1;;chr1:200379104..200379128,-!p2@ZNF281!0.72!11.17!ZNF281;;chr1:200008734..200008765,+!p2@NR5A2!0.72!4.30!NR5A2;;chr11:128563652..128563689,+!p3@FLI1!0.72!4.30!FLI1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.72!4.30!HOXC5;;chr15:67418177..67418204,+!p9@SMAD3!0.72!4.30!SMAD3;;chr10:63809106..63809127,+!p1@ARID5B!0.71!63.61!ARID5B;;chr7:28220198..28220269,-!p2@JAZF1!0.71!41.26!JAZF1;;chr7:28725740..28725778,+!p1@CREB5!0.71!41.26!CREB5;;chr18:72922743..72922761,+!p3@TSHZ1!0.71!15.04!TSHZ1;;chr7:28448995..28449011,+!p4@CREB5!0.71!6.02!CREB5;;chr14:62162258..62162269,+!p2@HIF1A!0.69!42.98!HIF1A;;chr15:67418047..67418093,+!p4@SMAD3!0.69!5.16!SMAD3;;chr8:37553292..37553317,+!p1@ZNF703!0.68!104.00!ZNF703;;chr15:96873892..96873919,+!p4@NR2F2!0.68!42.55!NR2F2;;chr8:23540441..23540466,-!p1@NKX3-1!0.68!8.17!NKX3-1;;chr7:137686763..137686784,-!p5@CREB3L2!0.67!6.88!CREB3L2;;chr12:80085255..80085284,-!p9@PAWR!0.67!5.59!PAWR;;chrX:66763856..66763896,+!p1@AR!0.67!5.59!AR;;chr15:96869255..96869291,+!p6@NR2F2!0.65!6.88!NR2F2;;chr9:16870710..16870763,-!p1@BNC2!0.65!6.45!BNC2;;chr7:27153454..27153469,-!p2@HOXA3!0.65!3.44!HOXA3;;chr8:11534521..11534533,+!p4@GATA4!0.65!3.44!GATA4;;chr15:96873921..96873946,+!p1@NR2F2!0.64!112.17!NR2F2;;chr11:46299186..46299195,+!p3@CREB3L1!0.64!3.87!CREB3L1;;chr2:200323414..200323455,-!p1@SATB2!0.63!7.74!SATB2;;chr9:4299552..4299598,-!p5@GLIS3!0.63!6.02!GLIS3;;chr6:21597514..21597578,+!p4@SOX4!0.63!6.02!SOX4;;chr6:1389789..1389821,+!p1@FOXF2!0.63!4.73!FOXF2;;chr12:52445218..52445237,+!p1@NR4A1!0.62!47.27!NR4A1;;chr15:37392724..37392757,-!p1@MEIS2!0.62!17.19!MEIS2;;chr20:42543506..42543549,+!p2@TOX2!0.62!8.60!TOX2;;chr10:48355030..48355090,+!p1@ZNF488!0.62!4.30!ZNF488;;chr9:14314522..14314556,-!p3@NFIB!0.61!8.17!NFIB;;chr9:102584262..102584276,+!p1@NR4A3!0.61!7.74!NR4A3;;chr16:54964740..54964789,+!p1@IRX5!0.61!4.73!IRX5;;chr1:212782094..212782109,+!p1@ATF3!0.60!98.42!ATF3;;chr7:28220354..28220441,-!p1@JAZF1!0.60!56.73!JAZF1;;chr6:10415263..10415274,-!p8@TFAP2A!0.60!3.01!TFAP2A;;chr8:93074803..93074845,-!p1@RUNX1T1!0.60!3.01!RUNX1T1;;chr8:93115584..93115642,-!p5@RUNX1T1!0.60!3.01!RUNX1T1;;chr3:138665774..138665786,-!p5@FOXL2!0.60!3.01!FOXL2;;chr12:54393880..54393962,+!p1@HOXC9!0.60!3.01!HOXC9;;chr14:62162224..62162254,+!p1@HIF1A!0.59!519.16!HIF1A;;chr20:31350184..31350200,+!p1@DNMT3B!0.59!6.88!DNMT3B;;chr14:62203595..62203676,+!p4@HIF1A!0.59!6.02!HIF1A;;chr9:4300004..4300015,-!p6@GLIS3!0.59!3.44!GLIS3;;chr14:62162285..62162296,+!p3@HIF1A!0.58!17.62!HIF1A;;chr12:80084737..80084763,-!p3@PAWR!0.58!12.46!PAWR;;chr2:200322654..200322707,-!p2@SATB2!0.57!4.30!SATB2;;chr17:70117153..70117174,+!p1@SOX9!0.56!33.52!SOX9;;chr8:67525473..67525518,-!p1@MYBL1!0.56!6.88!MYBL1;;chr6:21597370..21597408,+!p5@SOX4!0.56!4.73!SOX4;;chr21:36260295..36260310,-!p3@RUNX1!0.56!4.73!RUNX1;;chr7:6655225..6655279,+!p1@ENST00000457543!0.56!4.30!ZNF853;;chr8:37963466..37963506,+!p3@ASH2L!0.56!3.44!ASH2L;;chr7:137686791..137686821,-!p1@CREB3L2!0.55!93.26!CREB3L2;;chr12:80084303..80084332,-!p1@PAWR!0.55!18.48!PAWR;;chr9:35732647..35732678,+!p2@CREB3!0.55!17.62!CREB3;;chr1:164528384..164528409,+!p3@PBX1!0.55!9.45!PBX1;;chr10:63809134..63809145,+!p6@ARID5B!0.55!6.88!ARID5B;;chr6:85474299..85474324,-!p1@TBX18!0.55!5.16!TBX18;;chr8:28243813..28243839,-!p4@ZNF395!0.55!5.16!ZNF395;;chr3:168864315..168864339,-!p2@MECOM!0.55!4.73!MECOM;;chr11:65687222..65687240,+!p7@DRAP1!0.55!3.44!DRAP1;;chr11:31832687..31832704,-!p6@PAX6!0.55!2.58!PAX6;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.55!2.58!HOXC5;;chr8:11534438..11534451,+!p3@GATA4!0.55!2.58!GATA4;;chr8:71157595..71157616,-!p13@NCOA2!0.55!2.58!NCOA2;;chr9:22447422..22447483,+!p1@DMRTA1!0.55!2.58!DMRTA1;;chr15:67391010..67391046,+!p13@SMAD3!0.55!2.58!SMAD3;;chr16:31076332..31076388,-!p3@ZNF668!0.55!2.58!ZNF668;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.55!2.58!SEBOX;;chr18:19749504..19749515,+!p5@GATA6!0.55!2.58!GATA6;;chr3:114173720..114173794,-!p6@ZBTB20!0.55!2.58!ZBTB20;;chr3:138665760..138665772,-!p3@FOXL2!0.55!2.58!FOXL2;;chr3:138666029..138666038,-!p8@FOXL2!0.55!2.58!FOXL2;;chr4:174451370..174451387,-!p1@HAND2!0.55!2.58!HAND2;;chr20:42295713..42295738,+!p2@MYBL2!0.54!18.05!MYBL2;;chr20:42543441..42543497,+!p1@TOX2!0.54!13.75!TOX2;;chr3:25469724..25469773,+!p1@RARB!0.54!3.87!RARB;;chr3:141747459..141747475,-!p1@TFDP2!0.53!25.36!TFDP2;;chr8:37553261..37553282,+!p2@ZNF703!0.53!23.21!ZNF703;;chr3:12329397..12329433,+!p2@PPARG!0.53!6.45!PPARG;;chr15:67358111..67358122,+!p6@SMAD3!0.53!4.73!SMAD3;;chr6:21597283..21597312,+!p7@SOX4!0.53!3.44!SOX4;;chr12:26278008..26278024,-!p4@BHLHE41!0.53!3.01!BHLHE41;;chr3:157823517..157823562,-!p1@SHOX2!0.53!2.58!SHOX2;;chr6:126112074..126112144,+!p1@NCOA7!0.52!39.97!NCOA7;;chr15:96873984..96873999,+!p3@NR2F2!0.52!21.49!NR2F2;;chr19:37096139..37096170,-!p2@ZNF529!0.52!7.74!ZNF529;;chr3:107241993..107242023,+!p4@BBX!0.52!4.73!BBX;;chr15:96869114..96869160,+!p11@NR2F2!0.52!3.44!NR2F2;;chrX:128657413..128657456,-!p2@SMARCA1!0.51!24.93!SMARCA1;;chr6:21597765..21597779,+!p2@SOX4!0.51!23.64!SOX4;;chr1:164528410..164528428,+!p1@PBX1!0.51!21.49!PBX1;;chr19:6110474..6110551,-!p1@RFX2!0.51!17.62!RFX2;;chr3:44596679..44596726,+!p1@ZNF167!0.51!12.46!ZNF167;;chr15:37392616..37392638,-!p2@MEIS2!0.51!8.60!MEIS2;;chr14:62213827..62213853,+!p6@HIF1A!0.51!3.44!HIF1A;;chr7:64467057..64467078,-!p1@ZNF117!0.50!53.72!ZNF117;;chr8:77593474..77593612,+!p1@ZFHX4!0.50!11.60!ZFHX4;;chr1:164528340..164528379,+!p4@PBX1!0.50!6.45!PBX1;;chr9:99180617..99180658,-!p1@ZNF367!0.50!5.59!ZNF367;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.50!5.59!SOHLH2;;chr8:72756063..72756125,-!p1@MSC!0.50!5.16!MSC;;chr5:88179195..88179224,-!p3@MEF2C!0.50!3.87!MEF2C;;chr20:2673383..2673441,+!p1@EBF4!0.50!3.87!EBF4;;chr9:4299959..4299974,-!p4@GLIS3!0.50!3.87!GLIS3;;chr4:103422076..103422117,+!p5@NFKB1!0.50!3.44!NFKB1;;chr6:21597431..21597447,+!p8@SOX4!0.50!3.01!SOX4;;chr7:96654133..96654150,-!p1@DLX5!0.50!2.15!DLX5;;chr2:176994408..176994492,+!p1@HOXD8!0.50!2.15!HOXD8;;chr3:138665790..138665809,-!p4@FOXL2!0.50!2.15!FOXL2;;chr4:174451350..174451363,-!p3@HAND2!0.50!2.15!HAND2;;chr4:299227..299272,-!p1@ZNF732!0.50!2.15!ZNF732;;chr9:14314476..14314487,-!p9@NFIB!0.50!2.15!NFIB;;chr9:1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2;;chr9:14314131..14314147,-!p2@NFIB!0.18!6.88!NFIB;;chr6:20403826..20403886,+!p2@E2F3!0.18!6.02!E2F3;;chr7:101459230..101459243,+!p2@CUX1!0.18!6.02!CUX1;;chr2:174830564..174830605,-!p3@SP3!0.18!6.02!SP3;;chr19:36909528..36909581,-!p1@ZFP82!0.18!5.59!ZFP82;;chr6:44355257..44355315,+!p2@CDC5L!0.18!5.59!CDC5L;;chr2:239148671..239148686,-!p1@HES6!0.18!4.30!HES6;;chr16:71918033..71918101,-!p1@ZNF821!0.18!4.30!ZNF821;;chr19:44439387..44439419,-!p2@ZNF45!0.18!4.30!ZNF45;;chr6:15246200..15246214,+!p2@JARID2!0.18!3.01!JARID2;;chr1:33721900..33721921,+!p2@ZNF362!0.18!2.58!ZNF362;;chr20:3388207..3388236,-!p4@C20orf194!0.18!2.58!C20orf194;;chr10:76585205..76585251,+!p3@KAT6B!0.18!2.15!KAT6B;;chr12:3068466..3068495,+!p3@TEAD4!0.18!2.15!TEAD4;;chr19:24269949..24269969,+!p3@ZNF254!0.18!2.15!ZNF254;;chr2:37458749..37458766,-!p2@CEBPZ!0.18!2.15!CEBPZ;;chr8:144766669..144766683,+!p2@ZNF707!0.18!1.72!ZNF707;;chr11:85376097..85376108,-!p2@CREBZF!0.18!1.72!CREBZF;;chr12:19592563..19592585,+!p5@AEBP2!0.18!1.29!AEBP2;;chr12:56583297..56583304,-!p4@SMARCC2!0.18!1.29!SMARCC2;;chr9:130952713..130952727,-!p3@CIZ1!0.18!1.29!CIZ1;;chr1:8483723..8483752,-!p12@RERE!0.18!1.29!RERE;;chr18:52989081..52989117,-!p7@TCF4!0.18!1.29!TCF4;;chr19:35455160..35455197,-!p2@ZNF792!0.18!1.29!ZNF792;;chr16:30583204..30583233,-!p5@ZNF688!0.18!0.86!ZNF688;;chr19:20844346..20844351,-!p2@ZNF626!0.18!0.86!ZNF626;;chr19:37998036..37998098,+!p2@ZNF793!0.18!0.86!ZNF793;;chrX:152599653..152599662,+!p3@ZNF275!0.18!0.86!ZNF275;;chrX:76938351..76938379,-!p7@ATRX!0.18!0.86!ATRX;;chr12:80083544..80083558,-!p13@PAWR!0.18!0.86!PAWR;;chr12:80083807..80083859,-!p11@PAWR!0.18!0.86!PAWR;;chr1:249153309..249153330,-!p4@ZNF692!0.18!0.86!ZNF692;;chr20:48807548..48807572,+!p14@CEBPB!0.18!0.86!CEBPB;;chr6:43140095..43140145,+!p5@SRF!0.18!0.86!SRF;;chr1:8938709..8938720,-!p3@ENO1!0.17!64.04!ENO1;;chr2:220094514..220094599,+!p1@ANKZF1!0.17!38.25!ANKZF1;;chr11:65430402..65430431,-!p2@RELA!0.17!34.81!RELA;;chr11:695006..695074,-!p1@DEAF1!0.17!20.20!DEAF1;;chr4:87856129..87856186,+!p1@AFF1!0.17!18.05!AFF1;;chr21:30671235..30671253,+!p1@BACH1!0.17!16.33!BACH1;;chr6:130339710..130339745,+!p1@L3MBTL3!0.17!9.88!L3MBTL3;;chr7:64023441..64023462,-!p1@ZNF680!0.17!9.88!ZNF680;;chr10:76586348..76586366,+!p1@KAT6B!0.17!9.45!KAT6B;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!0.17!6.88!ZNF10;;chrX:129402866..129402880,-!p1@ZNF280C!0.17!6.88!ZNF280C;;chr19:9434841..9434886,+!p1@ZNF559!0.17!6.02!ZNF559;;chr8:146176199..146176272,-!p1@ZNF16!0.17!5.59!ZNF16;;chr19:15543565..15543579,-!p2@WIZ!0.17!5.16!WIZ;;chr20:46130672..46130686,+!p2@NCOA3!0.17!5.16!NCOA3;;chr13:41635285..41635356,-!p3@ELF1!0.17!4.73!ELF1;;chr19:58920000..58920057,+!p1@ZNF584!0.17!4.30!ZNF584;;chr2:25564750..25564807,-!p1@DNMT3A!0.17!4.30!DNMT3A;;chr4:38665883..38665922,+!p3@KLF3!0.17!4.30!KLF3;;chr15:71184724..71184778,-!p1@THAP10!0.17!4.30!THAP10;;chr19:58220517..58220583,-!p1@ZNF154!0.17!3.44!ZNF154;;chr7:148787768..148787825,-!p1@ZNF786!0.17!3.44!ZNF786;;chr6:43337255..43337329,-!p2@ZNF318!0.17!3.01!ZNF318;;chr19:53636125..53636178,-!p1@ZNF415!0.17!3.01!ZNF415;;chr19:45250948..45250998,+!p3@BCL3!0.17!2.58!BCL3;;chr6:157099036..157099067,+!p5@ARID1B!0.17!2.58!ARID1B;;chr3:178789622..178789633,-!p3@ZMAT3!0.17!1.72!ZMAT3;;chr3:24536253..24536328,-!p1@THRB!0.17!1.72!THRB;;chr3:170075357..170075368,+!p3@SKIL!0.17!1.29!SKIL;;chr20:42143136..42143161,+!p3@L3MBTL1!0.17!1.29!L3MBTL;;chr20:52185447..52185462,-!p2@ZNF217!0.17!1.29!ZNF217;;chr12:432372..432377,-!p3@KDM5A!0.17!1.29!KDM5A;;chr12:50479101..50479108,+!p3@SMARCD1!0.17!1.29!SMARCD1;;
+|ffid_belonging_in_development=CL:0000222
 |fonse_cell_line=FF:0102285
 |fonse_cell_line_closure=FF:0102285

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FF:10624-108H3: Difference between revisions

From FANTOM5_SSTAR

Revision as of 19:30, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0