FF:11261-116G1: Difference between revisions

Revision as of 20:22, 9 July 2012

Name:	Chondrocyte - de diff, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	cartilage
dev stage	57 years old adult
sex	male
age	57
cell type	chondroblast
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1737
catalog number	CA402-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0142
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.415
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.236
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.163
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.11
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.134
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.524
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.23
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.212
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	1.369
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0.134
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.16
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.319
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.388
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.448
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0248
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.381
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.501
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.187
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.388
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.548
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.319
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.756
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.199
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.782
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.436
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11923

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0207
MA0003.1	MA0003.1	0.31
MA0004.1	MA0004.1	0.008
MA0006.1	MA0006.1	0.131
MA0007.1	MA0007.1	0.962
MA0009.1	MA0009.1	0.578
MA0014.1	MA0014.1	0.391
MA0017.1	MA0017.1	0.854
MA0018.2	MA0018.2	0.00136
MA0019.1	MA0019.1	0.926
MA0024.1	MA0024.1	0.144
MA0025.1	MA0025.1	0.112
MA0027.1	MA0027.1	0.282
MA0028.1	MA0028.1	0.963
MA0029.1	MA0029.1	0.872
MA0030.1	MA0030.1	0.0315
MA0031.1	MA0031.1	0.0682
MA0035.2	MA0035.2	0.0132
MA0038.1	MA0038.1	0.299
MA0039.2	MA0039.2	0.2
MA0040.1	MA0040.1	0.927
MA0041.1	MA0041.1	0.97
MA0042.1	MA0042.1	0.905
MA0043.1	MA0043.1	0.0125
MA0046.1	MA0046.1	0.0797
MA0047.2	MA0047.2	0.744
MA0048.1	MA0048.1	3.7956e-4
MA0050.1	MA0050.1	0.581
MA0051.1	MA0051.1	0.792
MA0052.1	MA0052.1	0.0405
MA0055.1	MA0055.1	0.0326
MA0057.1	MA0057.1	0.215
MA0058.1	MA0058.1	7.99073e-4
MA0059.1	MA0059.1	0.2
MA0060.1	MA0060.1	7.47884e-5
MA0061.1	MA0061.1	0.0321
MA0062.2	MA0062.2	0.00209
MA0065.2	MA0065.2	0.813
MA0066.1	MA0066.1	0.916
MA0067.1	MA0067.1	0.0414
MA0068.1	MA0068.1	0.0604
MA0069.1	MA0069.1	0.493
MA0070.1	MA0070.1	0.703
MA0071.1	MA0071.1	0.902
MA0072.1	MA0072.1	0.222
MA0073.1	MA0073.1	0.639
MA0074.1	MA0074.1	0.853
MA0076.1	MA0076.1	0.585
MA0077.1	MA0077.1	0.0748
MA0078.1	MA0078.1	0.201
MA0079.2	MA0079.2	0.508
MA0080.2	MA0080.2	2.87485e-10
MA0081.1	MA0081.1	8.67254e-4
MA0083.1	MA0083.1	0.502
MA0084.1	MA0084.1	0.818
MA0087.1	MA0087.1	0.167
MA0088.1	MA0088.1	0.53
MA0090.1	MA0090.1	0.00208
MA0091.1	MA0091.1	0.809
MA0092.1	MA0092.1	0.417
MA0093.1	MA0093.1	0.00433
MA0099.2	MA0099.2	1.77579e-6
MA0100.1	MA0100.1	0.382
MA0101.1	MA0101.1	1.97672e-4
MA0102.2	MA0102.2	0.0326
MA0103.1	MA0103.1	3.60959e-4
MA0104.2	MA0104.2	0.00258
MA0105.1	MA0105.1	0.112
MA0106.1	MA0106.1	0.193
MA0107.1	MA0107.1	3.35018e-4
MA0108.2	MA0108.2	0.934
MA0111.1	MA0111.1	0.51
MA0112.2	MA0112.2	0.0178
MA0113.1	MA0113.1	0.883
MA0114.1	MA0114.1	0.532
MA0115.1	MA0115.1	0.962
MA0116.1	MA0116.1	0.0989
MA0117.1	MA0117.1	0.347
MA0119.1	MA0119.1	0.509
MA0122.1	MA0122.1	0.258
MA0124.1	MA0124.1	0.524
MA0125.1	MA0125.1	0.0873
MA0131.1	MA0131.1	0.388
MA0135.1	MA0135.1	0.164
MA0136.1	MA0136.1	1.81605e-10
MA0137.2	MA0137.2	0.196
MA0138.2	MA0138.2	0.878
MA0139.1	MA0139.1	0.595
MA0140.1	MA0140.1	0.0207
MA0141.1	MA0141.1	0.265
MA0142.1	MA0142.1	0.00207
MA0143.1	MA0143.1	0.95
MA0144.1	MA0144.1	0.12
MA0145.1	MA0145.1	0.234
MA0146.1	MA0146.1	0.335
MA0147.1	MA0147.1	0.0134
MA0148.1	MA0148.1	0.55
MA0149.1	MA0149.1	0.401
MA0150.1	MA0150.1	0.00134
MA0152.1	MA0152.1	0.0225
MA0153.1	MA0153.1	0.802
MA0154.1	MA0154.1	0.754
MA0155.1	MA0155.1	0.789
MA0156.1	MA0156.1	2.61882e-8
MA0157.1	MA0157.1	0.26
MA0159.1	MA0159.1	0.251
MA0160.1	MA0160.1	0.338
MA0162.1	MA0162.1	0.0353
MA0163.1	MA0163.1	0.0505
MA0164.1	MA0164.1	0.9
MA0258.1	MA0258.1	0.79
MA0259.1	MA0259.1	0.227

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11923

Novel motif	Logo	P-value
1	1	0.618
10	10	0.0932
100	100	0.149
101	101	0.403
102	102	0.267
103	103	0.434
104	104	0.456
105	105	0.249
106	106	0.0467
107	107	0.302
108	108	0.586
109	109	0.449
11	11	0.444
110	110	0.258
111	111	0.766
112	112	0.834
113	113	0.00573
114	114	0.477
115	115	0.00589
116	116	0.0268
117	117	0.359
118	118	0.772
119	119	0.484
12	12	0.0654
120	120	0.748
121	121	0.388
122	122	0.0434
123	123	0.0216
124	124	0.242
125	125	0.342
126	126	0.58
127	127	0.91
128	128	0.571
129	129	0.641
13	13	0.0709
130	130	0.678
131	131	0.625
132	132	0.0358
133	133	0.361
134	134	0.443
135	135	0.967
136	136	0.689
137	137	0.467
138	138	0.178
139	139	0.406
14	14	0.198
140	140	0.12
141	141	0.115
142	142	0.663
143	143	0.211
144	144	0.561
145	145	0.445
146	146	0.0537
147	147	0.199
148	148	0.642
149	149	0.0191
15	15	0.368
150	150	0.313
151	151	0.373
152	152	0.13
153	153	0.567
154	154	0.247
155	155	0.486
156	156	0.376
157	157	0.304
158	158	0.00694
159	159	0.37
16	16	0.109
160	160	0.914
161	161	0.969
162	162	0.974
163	163	0.267
164	164	0.123
165	165	0.604
166	166	0.00171
167	167	0.634
168	168	0.834
169	169	0.00818
17	17	0.658
18	18	0.828
19	19	0.00213
2	2	0.697
20	20	0.891
21	21	0.00569
22	22	0.214
23	23	0.279
24	24	0.15
25	25	0.595
26	26	0.887
27	27	0.709
28	28	0.377
29	29	0.16
3	3	0.997
30	30	0.516
31	31	0.771
32	32	1.01914e-12
33	33	0.972
34	34	0.984
35	35	0.121
36	36	0.307
37	37	0.565
38	38	0.982
39	39	0.259
4	4	0.332
40	40	0.759
41	41	0.116
42	42	0.545
43	43	0.694
44	44	0.353
45	45	0.456
46	46	0.726
47	47	0.408
48	48	0.766
49	49	0.575
5	5	0.752
50	50	0.441
51	51	0.916
52	52	0.302
53	53	0.347
54	54	0.973
55	55	0.843
56	56	0.557
57	57	0.526
58	58	0.557
59	59	0.144
6	6	0.36
60	60	0.582
61	61	0.64
62	62	0.86
63	63	0.289
64	64	0.888
65	65	0.357
66	66	0.552
67	67	0.542
68	68	0.923
69	69	0.224
7	7	0.35
70	70	0.966
71	71	0.35
72	72	0.208
73	73	0.059
74	74	0.115
75	75	0.783
76	76	0.466
77	77	0.00222
78	78	0.039
79	79	0.0145
8	8	0.183
80	80	0.14
81	81	0.99
82	82	0.886
83	83	0.534
84	84	0.333
85	85	0.603
86	86	0.949
87	87	0.589
88	88	0.393
89	89	0.328
9	9	0.6
90	90	0.447
91	91	0.362
92	92	0.562
93	93	0.89
94	94	0.574
95	95	0.831
96	96	0.871
97	97	0.563
98	98	0.781
99	99	0.117

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11923

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000246 human chondrocyte de-differentiated sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000153 (GAG secreting cell)
0000667 (collagen secreting cell)
0000327 (extracellular matrix secreting cell)
0000447 (carbohydrate secreting cell)
0000255 (eukaryotic cell)
0000138 (chondrocyte)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000037 (human chondrocyte sample)
0000246 (human chondrocyte de-differentiated sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr7:19157248..19157268,-!p1@TWIST1!1.86!191.20!TWIST1;;chr5:134369905..134369972,-!p1@PITX1!1.76!85.66!PITX1;;chr5:134369879..134369898,-!p2@PITX1!1.67!46.26!PITX1;;chr9:132427883..132427951,+!p2@PRRX2!1.66!44.46!PRRX2;;chr9:96717629..96717644,-!p1@BARX1!1.65!43.37!BARX1;;chr9:132427972..132428056,+!p1@PRRX2!1.64!54.94!PRRX2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.59!37.59!HOXC5;;chr1:170632285..170632309,+!p1@PRRX1!1.37!25.30!PRRX1;;chr6:1610293..1610310,+!p1@FOXC1!1.36!36.51!FOXC1;;chr2:46612334..46612349,+!p6@EPAS1!1.36!28.55!EPAS1;;chr14:61116183..61116208,-!p1@SIX1!1.34!76.99!SIX1;;chr6:1312325..1312340,+!p1@FOXQ1!1.30!30.72!FOXQ1;;chr5:158526917..158526932,-!p1@EBF1!1.27!43.37!EBF1;;chr7:15726296..15726315,-!p1@MEOX2!1.27!17.71!MEOX2;;chr1:44513995..44514031,+!p1@KLF17!1.27!17.71!KLF17;;chr19:13134772..13134822,+!p2@NFIX!1.24!24.22!NFIX;;chr2:45236540..45236577,-!p1@SIX2!1.22!15.54!SIX2;;chr8:67525443..67525459,-!p2@MYBL1!1.21!22.77!MYBL1;;chr1:170633058..170633084,+!p5@PRRX1!1.21!15.18!PRRX1;;chr12:53614115..53614154,-!p1@RARG!1.20!78.07!RARG;;chr6:1612300..1612324,+!p3@FOXC1!1.15!13.01!FOXC1;;chr18:22932080..22932170,-!p1@ZNF521!1.13!53.49!ZNF521;;chr1:170632959..170632987,+!p4@PRRX1!1.13!13.73!PRRX1;;chr11:65686802..65686818,+!p6@DRAP1!1.11!20.60!DRAP1;;chr2:19558373..19558392,-!p1@OSR1!1.08!30.36!OSR1;;chr17:48072574..48072597,-!p1@DLX3!1.07!10.84!DLX3;;chr12:54378923..54378966,+!p1@HOXC10!1.07!10.84!HOXC10;;chr2:85981107..85981120,+!p3@ATOH8!1.06!10.48!ATOH8;;chr7:27224795..27224840,-!p2@HOXA11!1.05!10.12!HOXA11;;chr12:54380404..54380433,+!p3@HOXC10!1.03!9.76!HOXC10;;chr11:46299199..46299233,+!p1@CREB3L1!1.02!49.88!CREB3L1;;chr7:15726243..15726293,-!p2@MEOX2!1.02!9.40!MEOX2;;chr7:28448965..28448994,+!p2@CREB5!1.00!32.17!CREB5;;chr15:66994663..66994680,+!p1@SMAD6!1.00!21.69!SMAD6;;chr7:19157043..19157088,-!p2@TWIST1!0.99!22.77!TWIST1;;chr1:170633348..170633399,+!p2@PRRX1!0.99!11.93!PRRX1;;chr7:27224842..27224872,-!p1@HOXA11!0.99!8.67!HOXA11;;chr8:49833948..49833973,-!p2@SNAI2!0.97!54.58!SNAI2;;chr6:19837592..19837621,+!p1@ID4!0.97!52.05!ID4;;chr11:65686732..65686756,+!p2@DRAP1!0.97!36.51!DRAP1;;chr17:59477233..59477263,+!p1@TBX2!0.96!25.66!TBX2;;chr6:1389789..1389821,+!p1@FOXF2!0.96!11.20!FOXF2;;chr1:170633262..170633285,+!p3@PRRX1!0.96!9.40!PRRX1;;chr15:83953397..83953425,-!p1@BNC1!0.95!9.04!BNC1;;chr7:17338266..17338282,+!p1@AHR!0.93!84.94!AHR;;chr10:63809013..63809041,+!p3@ARID5B!0.93!43.37!ARID5B;;chr1:170632477..170632506,+!p6@PRRX1!0.93!7.59!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.93!7.59!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!0.92!171.68!AEBP1;;chr7:27213893..27213954,-!p1@HOXA10!0.92!7.23!HOXA10;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.92!7.23!HOXC5;;chr14:24837368..24837401,+!p1@NFATC4!0.90!16.99!NFATC4;;chr12:54379029..54379057,+!p2@HOXC10!0.90!6.87!HOXC10;;chr7:15725757..15725828,-!p5@MEOX2!0.90!6.87!MEOX2;;chr7:27205106..27205134,-!p2@HOXA9!0.90!6.87!HOXA9;;chr2:176994408..176994492,+!p1@HOXD8!0.90!6.87!HOXD8;;chr15:66994561..66994597,+!p2@SMAD6!0.89!16.63!SMAD6;;chr16:54320617..54320643,-!p3@IRX3!0.88!8.67!IRX3;;chr2:46524537..46524553,+!p1@EPAS1!0.87!663.24!EPAS1;;chr6:1612248..1612281,+!p2@FOXC1!0.86!6.87!FOXC1;;chr5:158527104..158527135,-!p4@EBF1!0.85!6.14!EBF1;;chr7:96654026..96654061,-!p2@DLX5!0.85!6.14!DLX5;;chr15:67458491..67458505,+!p18@SMAD3!0.85!6.14!SMAD3;;chr1:170633194..170633205,+!p18@PRRX1!0.85!6.14!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.83!5.78!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!0.83!5.78!LHX9;;chr21:40032581..40032605,-!p4@ERG!0.83!5.78!ERG;;chr21:40032884..40032915,-!p2@ERG!0.83!5.78!ERG;;chr7:27192185..27192209,-!p1@HOXA3!0.83!5.78!HOXA3;;chr10:131762504..131762555,-!p1@EBF3!0.83!5.78!EBF3;;chr15:66994615..66994630,+!p3@SMAD6!0.82!8.31!SMAD6;;chr17:59477275..59477286,+!p3@TBX2!0.82!7.59!TBX2;;chr10:114710244..114710257,+!p3@TCF7L2!0.80!15.18!TCF7L2;;chr7:44143978..44143989,+!p2@AEBP1!0.80!10.12!AEBP1;;chr4:4861385..4861398,+!p1@MSX1!0.79!16.26!MSX1;;chr5:137804484..137804498,+!p2@EGR1!0.78!21.69!EGR1;;chr2:85981222..85981259,+!p2@ATOH8!0.78!8.67!ATOH8;;chr16:54320646..54320672,-!p2@IRX3!0.78!7.95!IRX3;;chr15:66994718..66994729,+!p4@SMAD6!0.78!5.06!SMAD6;;chr18:22932004..22932021,-!p2@ZNF521!0.78!5.06!ZNF521;;chr21:40033695..40033712,-!p6@ERG!0.78!5.06!ERG;;chr2:45236579..45236596,-!p2@SIX2!0.78!5.06!SIX2;;chr10:63809106..63809127,+!p1@ARID5B!0.77!73.01!ARID5B;;chr7:42276787..42276815,-!p1@GLI3!0.77!14.10!GLI3;;chr6:85474299..85474324,-!p1@TBX18!0.76!9.04!TBX18;;chr7:27205136..27205164,-!p1@HOXA9!0.76!4.70!HOXA9;;chr8:40755333..40755352,-!p1@ZMAT4!0.76!4.70!ZMAT4;;chr13:37494275..37494304,-!p2@SMAD9!0.76!4.70!SMAD9;;chr8:49833978..49833996,-!p1@SNAI2!0.75!104.82!SNAI2;;chr10:63853436..63853442,+!p4@ARID5B!0.74!26.75!ARID5B;;chr11:46299539..46299620,+!p2@CREB3L1!0.74!7.95!CREB3L1;;chr7:28448995..28449011,+!p4@CREB5!0.74!6.51!CREB5;;chr2:191878874..191878938,-!p1@STAT1!0.73!267.46!STAT1;;chr5:321810..321877,+!p1@AHRR!0.73!15.18!AHRR;;chr9:14083467..14083483,-!p4@NFIB!0.73!11.57!NFIB;;chr5:43067636..43067674,+!p6@ZNF131!0.73!6.14!ZNF131;;chr15:66995062..66995065,+!p8@SMAD6!0.73!4.34!SMAD6;;chr3:21792682..21792720,-!p1@ZNF385D!0.73!4.34!ZNF385D;;chr10:63853479..63853496,+!p21@ARID5B!0.73!4.34!ARID5B;;chr7:17338324..17338341,+!p3@AHR!0.72!15.54!AHR;;chr8:99956662..99956684,+!p1@OSR2!0.72!6.87!OSR2;;chr10:31607702..31607755,+!p3@ZEB1!0.72!5.06!ZEB1;;chr13:37494365..37494381,-!p1@SMAD9!0.71!7.59!SMAD9;;chr6:144329384..144329405,-!p1@PLAGL1!0.70!53.13!PLAGL1;;chr7:150945754..150945789,-!p2@SMARCD3!0.70!13.73!SMARCD3;;chr2:239756739..239756755,+!p2@TWIST2!0.70!7.23!TWIST2;;chr9:16870659..16870675,-!p2@BNC2!0.70!5.06!BNC2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.70!4.34!GLIS1;;chr2:85981073..85981091,+!p5@ATOH8!0.70!3.98!ATOH8;;chr9:96717678..96717689,-!p2@BARX1!0.70!3.98!BARX1;;chr10:63809134..63809145,+!p6@ARID5B!0.69!9.76!ARID5B;;chr21:36260773..36260804,-!p7@RUNX1!0.69!5.42!RUNX1;;chr1:23885981..23886002,-!p1@ID3!0.68!772.40!ID3;;chr12:2986206..2986258,-!p2@FOXM1!0.68!26.02!FOXM1;;chr3:71007886..71007887,-!p8@FOXP1!0.68!13.73!FOXP1;;chr16:54320158..54320200,-!p5@IRX3!0.68!5.78!IRX3;;chr3:21792585..21792625,-!p2@ZNF385D!0.68!4.34!ZNF385D;;chr10:63809077..63809089,+!p5@ARID5B!0.67!8.67!ARID5B;;chr2:145277882..145277967,-!p3@ZEB2!0.67!6.87!ZEB2;;chr18:77155922..77155939,+!p1@NFATC1!0.66!10.84!NFATC1;;chr19:12203100..12203132,+!p1@ZNF788!0.66!7.95!ZNF788;;chr15:67418177..67418204,+!p9@SMAD3!0.66!3.61!SMAD3;;chr5:134369848..134369853,-!p6@PITX1!0.66!3.61!PITX1;;chr5:158527139..158527161,-!p5@EBF1!0.66!3.61!EBF1;;chr7:27196267..27196311,-!p1@HOXA7!0.66!3.61!HOXA7;;chr3:71007344..71007348,-!p6@FOXP1!0.65!15.90!FOXP1;;chr12:27485762..27485776,+!p3@ARNTL2!0.65!10.48!ARNTL2;;chr6:85473156..85473210,-!p2@TBX18!0.65!4.34!TBX18;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.64!39.76!GLIS2;;chr1:47903709..47903764,+!p1@BC169308!0.64!3.98!FOXD2;;chr7:28725740..28725778,+!p1@CREB5!0.63!34.70!CREB5;;chr5:158527020..158527029,-!p13@EBF1!0.63!3.25!EBF1;;chr7:27212374..27212387,-!p12@HOXA10!0.63!3.25!HOXA10;;chr7:27212407..27212421,-!p9@HOXA10!0.63!3.25!HOXA10;;chr8:116673894..116673913,-!p12@TRPS1!0.63!3.25!TRPS1;;chrY:21906594..21906622,-!p1@KDM5D!0.63!3.25!KDM5D;;chr12:54393880..54393962,+!p1@HOXC9!0.63!3.25!HOXC9;;chr12:54402745..54402788,+!p1@HOXC8!0.63!3.25!HOXC8;;chr1:170632137..170632172,+!p10@PRRX1!0.63!3.25!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.63!3.25!PRRX1;;chr2:102091144..102091183,-!p2@RFX8!0.63!3.25!RFX8;;chr2:102091566..102091581,-!p1@RFX8!0.63!3.25!RFX8;;chr7:17338239..17338262,+!p2@AHR!0.62!28.19!AHR;;chr5:139487608..139487663,+!p3@PURA!0.62!7.59!PURA;;chr19:13134457..13134462,+!p5@NFIX!0.62!6.14!NFIX;;chr7:1577111..1577132,+!p4@MAFK!0.62!3.61!MAFK;;chr5:176738887..176738934,-!p1@MXD3!0.61!24.22!MXD3;;chr2:85980951..85981004,+!p1@ATOH8!0.61!5.42!ATOH8;;chr1:8938709..8938720,-!p3@ENO1!0.60!174.94!ENO1;;chr10:77161504..77161530,-!p1@ZNF503!0.60!47.71!ZNF503;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.60!15.90!TAL1;;chr2:85980919..85980942,+!p4@ATOH8!0.60!3.25!ATOH8;;chr5:139494712..139494759,+!p5@PURA!0.59!5.42!PURA;;chr12:80085061..80085119,-!p6@PAWR!0.59!5.06!PAWR;;chr12:125003087..125003141,-!p4@NCOR2!0.59!3.98!NCOR2;;chr10:63851669..63851682,+!p10@ARID5B!0.59!3.25!ARID5B;;chr12:54410948..54410992,+!p3@HOXC5!0.59!2.89!HOXC5;;chrY:2803415..2803468,+!p1@ZFY!0.59!2.89!ZFY;;chr5:134369643..134369675,-!p4@PITX1!0.59!2.89!PITX1;;chr7:96654133..96654150,-!p1@DLX5!0.59!2.89!DLX5;;chr8:116681409..116681431,-!p2@TRPS1!0.58!9.04!TRPS1;;chr16:54320675..54320715,-!p1@IRX3!0.58!6.87!IRX3;;chr14:75894714..75894733,+!p1@JDP2!0.57!96.50!JDP2;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.57!5.06!MEIS3P1;;chr2:191878812..191878823,-!p2@STAT1!0.57!3.61!STAT1;;chr14:61116168..61116180,-!p2@SIX1!0.57!3.25!SIX1;;chr9:4300050..4300118,-!p1@GLIS3!0.56!20.96!GLIS3;;chr2:239756671..239756732,+!p1@TWIST2!0.56!10.12!TWIST2;;chr16:79634595..79634620,-!p2@MAF!0.56!5.42!MAF;;chrX:129402768..129402796,-!p2@ZNF280C!0.55!9.40!ZNF280C;;chr5:72744445..72744466,-!p2@FOXD1!0.55!4.70!FOXD1;;chr5:134369973..134369984,-!p3@PITX1!0.55!2.53!PITX1;;chr6:1389989..1390019,+!p2@FOXF2!0.55!2.53!FOXF2;;chr6:1612284..1612295,+!p10@FOXC1!0.55!2.53!FOXC1;;chr7:15726206..15726217,-!p6@MEOX2!0.55!2.53!MEOX2;;chr7:27212501..27212513,-!p5@HOXA10!0.55!2.53!HOXA10;;chr9:14314476..14314487,-!p9@NFIB!0.55!2.53!NFIB;;chr14:95236440..95236465,-!p1@GSC!0.55!2.53!GSC;;chr15:66994885..66994904,+!p7@SMAD6!0.55!2.53!SMAD6;;chr17:59529743..59529798,+!p1@TBX4!0.55!2.53!TBX4;;chr1:119530706..119530736,-!p3@TBX15!0.55!2.53!TBX15;;chr1:170632683..170632696,+!p12@PRRX1!0.55!2.53!PRRX1;;chr1:170633100..170633112,+!p19@PRRX1!0.55!2.53!PRRX1;;chr9:2158443..2158481,+!p2@SMARCA2!0.54!8.31!SMARCA2;;chr19:13106214..13106382,+!p1@NFIX!0.53!71.56!NFIX;;chr14:62162258..62162269,+!p2@HIF1A!0.53!29.28!HIF1A;;chr16:79634624..796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chr8:72756267..72756296,-!p4@MSC!0.23!1.45!MSC;;chr16:67063142..67063153,+!p4@CBFB!0.23!1.45!CBFB;;chr19:12444458..12444486,-!p2@ZNF563!0.23!1.45!ZNF563;;chr11:19262486..19262512,-!p4@E2F8!0.23!1.08!E2F8;;chr19:38720294..38720348,-!p1@DPF1!0.23!1.08!DPF1;;chr19:58281003..58281012,+!p2@ZNF586!0.23!1.08!ZNF586;;chr8:116681108..116681120,-!p9@TRPS1!0.23!1.08!TRPS1;;chr1:203764742..203764769,+!p1@ZC3H11A!0.22!8.67!ZC3H11A;;chr7:14029283..14029311,-!p1@ETV1!0.22!7.23!ETV1;;chr10:31320777..31320834,-!p1@ZNF438!0.22!6.87!ZNF438;;chr2:217277480..217277505,+!p2@SMARCAL1!0.22!4.34!SMARCAL1;;chr19:11877838..11877915,+!p1@ZNF441!0.22!3.98!ZNF441;;chr18:3450293..3450304,+!p4@TGIF1!0.22!2.89!TGIF1;;chr12:133656995..133657049,+!p2@ZNF140!0.22!2.89!ZNF140;;chr7:148959065..148959126,+!p2@ZNF783!0.22!2.53!ZNF783;;chr8:23540441..23540466,-!p1@NKX3-1!0.22!2.17!NKX3-1;;chr12:3068501..3068515,+!p4@TEAD4!0.22!1.81!TEAD4;;chr19:20150029..20150078,-!p3@ZNF682!0.22!1.81!ZNF682;;chr1:221053049..221053075,+!p3@HLX!0.22!1.81!HLX;;chr1:164528911..164528940,+!p7@PBX1!0.22!1.45!PBX1;;chr1:91487352..91487376,-!p9@ZNF644!0.22!1.08!ZNF644;;chr20:52185283..52185294,-!p5@ZNF217!0.22!1.08!ZNF217;;chr6:21597431..21597447,+!p8@SOX4!0.22!1.08!SOX4;;chr8:60031809..60031835,-!p4@TOX!0.22!1.08!TOX;;chr22:41697484..41697496,+!p3@ZC3H7B!0.22!1.08!ZC3H7B;;chr18:52989565..52989623,-!p9@TCF4!0.22!1.08!TCF4;;chr11:62369806..62369837,-!p8@MTA2!0.22!1.08!MTA2;;chr14:62213758..62213774,+!p8@HIF1A!0.22!1.08!HIF1A;;chr8:48650715..48650735,-!p1@CEBPD!0.21!188.67!CEBPD;;chr5:138629417..138629446,+!p1@MATR3!0.21!136.62!MATR3;;chr2:28615716..28615733,+!p1@FOSL2!0.21!70.12!FOSL2;;chr12:56753869..56753930,-!p1@STAT2!0.21!64.34!STAT2;;chr4:26322616..26322652,+!p1@RBPJ!0.21!31.08!RBPJ;;chr1:61548225..61548299,+!p1@NFIA!0.21!18.79!NFIA;;chr12:52445218..52445237,+!p1@NR4A1!0.21!18.07!NR4A1;;chr8:116681194..116681214,-!p1@TRPS1!0.21!13.01!TRPS1;;chr19:20278012..20278034,+!p1@ZNF486!0.21!11.57!ZNF486;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.21!6.51!ZNF20;;chr8:42698194..42698239,-!p2@THAP1!0.21!5.78!THAP1;;chr1:205600919..205600982,-!p3@ELK4!0.21!4.70!ELK4;;chr1:67396044..67396071,+!p3@MIER1!0.21!4.34!MIER1;;chr8:102217679..102217719,-!p2@ZNF706!0.21!4.34!ZNF706;;chr3:71630980..71631110,-!p3@FOXP1!0.21!4.34!FOXP1;;chr8:48650982..48651023,-!p3@CEBPD!0.21!2.89!CEBPD;;chr7:148823387..148823440,-!p1@ZNF425!0.21!1.81!ZNF425;;chr8:28243813..28243839,-!p4@ZNF395!0.21!1.81!ZNF395;;chr3:101395999..101396010,-!p3@ZBTB11!0.21!1.81!ZBTB11;;chr4:206390..206444,+!p1@ZNF876P!0.21!1.81!ZNF876P;;chr17:42297282..42297300,-!p9@UBTF!0.21!1.81!UBTF;;chr19:21265028..21265052,+!p2@ZNF714!0.21!1.81!ZNF714;;chr1:35657082..35657099,-!p8@SFPQ!0.21!1.45!SFPQ;;chr20:50179368..50179392,-!p2@NFATC2!0.21!1.08!NFATC2;;chr18:56530812..56530837,+!p10@ZNF532!0.21!1.08!ZNF532;;chr19:13106383..13106423,+!p8@NFIX!0.21!1.08!NFIX;;chr8:72756213..72756243,-!p5@MSC!0.21!1.08!MSC;;chr22:29196030..29196075,-!p5@XBP1!0.21!1.08!XBP1;;chr3:44626359..44626387,+!p4@ZNF197!0.21!1.08!ZNF197;;chr11:12696071..12696086,+!p3@TEAD1!0.21!1.08!TEAD1;;chr12:12764917..12764931,+!p4@CREBL2!0.21!1.08!CREBL2;;chr5:137804130..137804156,+!p5@EGR1!0.21!0.72!EGR1;;chr20:34359925..34359991,+!p1@PHF20!0.20!62.53!PHF20;;chr10:22292613..22292674,-!p1@DNAJC1!0.20!41.57!DNAJC1;;chr7:137686791..137686821,-!p1@CREB3L2!0.20!41.20!CREB3L2;;chr3:185826855..185826911,-!p1@ETV5!0.20!38.67!ETV5;;chr6:31515337..31515420,+!p1@NFKBIL1!0.20!25.66!NFKBIL1;;chr3:141868293..141868355,-!p2@TFDP2!0.20!11.93!TFDP2;;chr19:38146320..38146401,-!p1@ZFP30!0.20!7.23!ZFP30;;chr19:44488330..44488379,+!p1@ZNF155!0.20!6.14!ZNF155;;chr10:96122645..96122675,-!p2@NOC3L!0.20!6.14!NOC3L;;chr13:41635285..41635356,-!p3@ELF1!0.20!5.06!ELF1;;chr3:52719546..52719636,-!p3@PBRM1!0.20!4.34!PBRM1;;chr6:126102292..126102329,+!p3@NCOA7!0.20!3.98!NCOA7;;chr19:36705547..36705597,-!p1@ZNF565!0.20!2.89!ZNF565;;chr18:56530692..56530723,+!p2@ZNF532!0.20!2.53!ZNF532;;chr7:99102267..99102304,+!p2@ZKSCAN5!0.20!2.53!ZKSCAN5;;chr5:178157700..178157734,-!p3@ZNF354A!0.20!2.17!ZNF354A;;chr6:26659967..26659982,-!p1@ZNF322P1,p1@ZNF322!0.20!2.17!ZNF322;;chr2:71127699..71127744,+!p1@VAX2!0.20!2.17!VAX2;;chr10:43932296..43932360,+!p1@ZNF487P!0.20!2.17!ZNF487P;;chr12:133562945..133562958,+!p2@ZNF26!0.20!1.81!ZNF26;;chr3:40566488..40566502,+!p3@ZNF621!0.20!1.81!ZNF621;;chr19:58987711..58987729,+!p2@ZNF446!0.20!1.45!ZNF446;;chr20:44600199..44600219,-!p3@ZNF335!0.20!1.08!ZNF335;;chr21:36260463..36260480,-!p9@RUNX1!0.20!1.08!RUNX1;;chr2:10091815..10091864,+!p1@GRHL1!0.20!1.08!GRHL1;;chr3:14988878..14988903,+!p7@NR2C2!0.20!1.08!NR2C2;;chr4:106156933..106156947,+!p3@TET2!0.20!1.08!TET2;;chr9:88969287..88969297,-!p3@ZCCHC6!0.20!1.08!ZCCHC6;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.20!1.08!GLIS2;;chr19:13136241..13136258,+!p7@NFIX!0.20!1.08!NFIX;;chr14:69260117..69260141,-!p4@ZFP36L1!0.20!1.08!ZFP36L1;;chr6:151712922..151712942,-!p6@ZBTB2!0.20!1.08!ZBTB2;;chr6:15249097..15249115,+!p7@JARID2!0.20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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11261-116G1: Difference between revisions

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Revision as of 20:22, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0