FFCP PHASE1:Hg19::chr19:14089228..14089244,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002057!1.12e-16!42;CL:0000860!8.34e-15!45;CL:0000839!6.46e-12!70;CL:0000766!9.03e-12!76;CL:0000557!1.43e-11!71;CL:0002194!2.35e-11!63;CL:0000576!2.35e-11!63;CL:0000040!2.35e-11!63;CL:0000559!2.35e-11!63;CL:0002009!1.17e-10!65;CL:0002393!1.08e-09!9;CL:0002397!1.08e-09!9;CL:0002322!6.02e-07!5 | |ontology_enrichment_celltype=CL:0002057!1.12e-16!42;CL:0000860!8.34e-15!45;CL:0000839!6.46e-12!70;CL:0000766!9.03e-12!76;CL:0000557!1.43e-11!71;CL:0002194!2.35e-11!63;CL:0000576!2.35e-11!63;CL:0000040!2.35e-11!63;CL:0000559!2.35e-11!63;CL:0002009!1.17e-10!65;CL:0002393!1.08e-09!9;CL:0002397!1.08e-09!9;CL:0002322!6.02e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.86e-23;5!CL:0000875;3.82e-15;3!CL:0002396;3.82e-15;3!CL:0002393;2.27e-12;6!CL:0002397;2.27e-12;6!CL:0000097;7.95e-09;5!CL:0002321;1.23e-07;15!CL:0000576;1.58e-07;48!CL:0000766;2.05e-07;69 | |ontology_enrichment_celltype_v019=CL:0002322;1.86e-23;5!CL:0000875;3.82e-15;3!CL:0002396;3.82e-15;3!CL:0002393;2.27e-12;6!CL:0002397;2.27e-12;6!CL:0000097;7.95e-09;5!CL:0002321;1.23e-07;15!CL:0000576;1.58e-07;48!CL:0000766;2.05e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.01e-24,9;CL:0002397,1.01e-24,9;CL:0002322,6.13e-24,5;CL:0000875,2.34e-15,3;CL:0002396,2.34e-15,3;CL:0000860,3.16e-13,42;CL:0002057,3.16e-13,42;CL:0000766,2.07e-12,72;CL:0000839,4.76e-12,66;CL:0000557,7.99e-12,67;CL:0000473,2.88e-11,48;CL:0000234,2.88e-11,48;CL:0000097,6.51e-09,5;CL:0002028,6.51e-09,5;CL:0002194,1.56e-08,59;CL:0000576,1.56e-08,59;CL:0000040,1.56e-08,59;CL:0000559,1.56e-08,59;CL:0002009,3.49e-08,61;CL:0000763,3.46e-07,108;CL:0000049,3.46e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;9.43e-09;42 | |ontology_enrichment_development_v019=CL:0002057;9.43e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-12!115;UBERON:0002193!3.59e-11!112;UBERON:0000468!2.94e-10!659;UBERON:0002390!7.17e-10!102;UBERON:0003061!7.17e-10!102;UBERON:0002371!1.21e-09!80;UBERON:0000922!4.85e-09!612;UBERON:0001474!6.18e-09!86;UBERON:0002405!2.43e-08!115;UBERON:0000467!3.58e-08!625;UBERON:0000480!4.41e-08!626;UBERON:0000062!1.95e-07!511;UBERON:0003081!6.11e-07!216;UBERON:0004765!9.68e-07!101;UBERON:0001434!9.68e-07!101 | |ontology_enrichment_uberon=UBERON:0007023!1.15e-12!115;UBERON:0002193!3.59e-11!112;UBERON:0000468!2.94e-10!659;UBERON:0002390!7.17e-10!102;UBERON:0003061!7.17e-10!102;UBERON:0002371!1.21e-09!80;UBERON:0000922!4.85e-09!612;UBERON:0001474!6.18e-09!86;UBERON:0002405!2.43e-08!115;UBERON:0000467!3.58e-08!625;UBERON:0000480!4.41e-08!626;UBERON:0000062!1.95e-07!511;UBERON:0003081!6.11e-07!216;UBERON:0004765!9.68e-07!101;UBERON:0001434!9.68e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.45e-09;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;7.45e-09;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.37e-10,82;UBERON:0002371,4.59e-10,76;UBERON:0004765,2.36e-09,90;UBERON:0002405,7.75e-09,93;UBERON:0002390,2.97e-08,98;UBERON:0003061,2.97e-08,98;UBERON:0002193,3.08e-08,108;UBERON:0001434,4.31e-08,100 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.23852898652861,0,0.90361775633475,0.369754010166788,0,0,0.587200878669695,1.10799081706375,0.401088894940283,0.217010870715852,0.895661896959697,0.32389366601898,0.77272670290256,1.01778767145695,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,1.03423704220986,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0.521482918420201,0.434377689410233,0.605399502633369,0,0,1.69004229049553,2.12604299965044,1.46761051855863,2.92054440980887,1.20141514273205,1.6072558669708,1.99508920618874,4.77400025277816,3.10529061399878,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0.665188192387692,0.263504357079378,0.261958150995425,0.364295288292542,0,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.775250277507987,0.35576626268671,1.00416183829401,0,0.760272105718513,0,0,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0.57978255948989,0,0.286804595389004,3.29329006549908,2.25300606146525,2.5562667431294,1.96956004529204,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0,0,0,0.100528972411631,0.740707561268237,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,2.45003920808834,1.2624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0.303127571446259,0,1.5119514666484,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.462092022626489,0.784349769176855,0,0.844413031143006,0,0,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,1.34324852833307,0,0,0.256450125116389,0.984043937099117,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,2.04180339991335,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0,0.614321404198464,0,0.140669416410513,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,2.41981432097328,0,0.758238955541855,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,3.26547668758551,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.229160424011684,0,0.399358000997982,0.429226048136571,0.669514372325618,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,2.25054407851027,2.06309154895851,0.83088067605837,0,0,0.0607495566580247,0,0.157611414598396,0.367182116944987,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0.992422356778588,1.23109871051734,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.40781839786099,0.263091094251396,0.472775363535873,0,0.313972371402056,0,0,0.913158720509496,0,0,0.929195074296532,0,0,0.695433089210318,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,1.31135736302374,3.29222107453066,0,0,0,0,0.4226557275834,0,0.281951753939561,0.257831551894309,0,0,0,0,0.730336388246517,0.917458566809082,0.286679166302903,0,0.271965960763659,0,1.0580536810308,0,0.462175628631418,0,1.64016352285603,0.655593431782173,0.126698501011437,0.509944148709909,4.00826107898341,3.95148067999833,0.50141507858475,0.227336094654718,0,0,0.103432995861895,0.426467963801962,0.714193294391221,0.129177819672012,0.0620747142958579,0,0,0,1.52401723527873,0.342233301085281,0.26940821205835,0.502055437748735,0.665320713092027,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0.603821380773079,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.23852898652861,0,0.90361775633475,0.369754010166788,0,0,0.587200878669695,1.10799081706375,0.401088894940283,0.217010870715852,0.895661896959697,0.32389366601898,0.77272670290256,1.01778767145695,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,1.03423704220986,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0.521482918420201,0.434377689410233,0.605399502633369,0,0,1.69004229049553,2.12604299965044,1.46761051855863,2.92054440980887,1.20141514273205,1.6072558669708,1.99508920618874,4.77400025277816,3.10529061399878,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0.665188192387692,0.263504357079378,0.261958150995425,0.364295288292542,0,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.775250277507987,0.35576626268671,1.00416183829401,0,0.760272105718513,0,0,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0.57978255948989,0,0.286804595389004,3.29329006549908,2.25300606146525,2.5562667431294,1.96956004529204,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0,0,0,0.100528972411631,0.740707561268237,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,2.45003920808834,1.2624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0.303127571446259,0,1.5119514666484,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.462092022626489,0.784349769176855,0,0.844413031143006,0,0,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,1.34324852833307,0,0,0.256450125116389,0.984043937099117,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,2.04180339991335,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0,0.614321404198464,0,0.140669416410513,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,2.41981432097328,0,0.758238955541855,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,3.26547668758551,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.229160424011684,0,0.399358000997982,0.429226048136571,0.669514372325618,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,2.25054407851027,2.06309154895851,0.83088067605837,0,0,0.0607495566580247,0,0.157611414598396,0.367182116944987,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0.992422356778588,1.23109871051734,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.40781839786099,0.263091094251396,0.472775363535873,0,0.313972371402056,0,0,0.913158720509496,0,0,0.929195074296532,0,0,0.695433089210318,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,1.31135736302374,3.29222107453066,0,0,0,0,0.4226557275834,0,0.281951753939561,0.257831551894309,0,0,0,0,0.730336388246517,0.917458566809082,0.286679166302903,0,0.271965960763659,0,1.0580536810308,0,0.462175628631418,0,1.64016352285603,0.655593431782173,0.126698501011437,0.509944148709909,4.00826107898341,3.95148067999833,0.50141507858475,0.227336094654718,0,0,0.103432995861895,0.426467963801962,0.714193294391221,0.129177819672012,0.0620747142958579,0,0,0,1.52401723527873,0.342233301085281,0.26940821205835,0.502055437748735,0.665320713092027,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0.603821380773079,0 | ||
|short_description=p@chr19:14089228..14089244,- | |short_description=p@chr19:14089228..14089244,- | ||
}} | }} |
Revision as of 08:16, 17 November 2012
Short description: | p@chr19:14089228..14089244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:14089228..14089244, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.01e-24 | 9 |
CD14-positive, CD16-positive monocyte | 1.01e-24 | 9 |
embryonic stem cell | 6.13e-24 | 5 |
non-classical monocyte | 2.34e-15 | 3 |
CD14-low, CD16-positive monocyte | 2.34e-15 | 3 |
classical monocyte | 3.16e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.16e-13 | 42 |
myeloid leukocyte | 2.07e-12 | 72 |
myeloid lineage restricted progenitor cell | 4.76e-12 | 66 |
granulocyte monocyte progenitor cell | 7.99e-12 | 67 |
defensive cell | 2.88e-11 | 48 |
phagocyte | 2.88e-11 | 48 |
mast cell | 6.51e-09 | 5 |
basophil mast progenitor cell | 6.51e-09 | 5 |
monopoietic cell | 1.56e-08 | 59 |
monocyte | 1.56e-08 | 59 |
monoblast | 1.56e-08 | 59 |
promonocyte | 1.56e-08 | 59 |
macrophage dendritic cell progenitor | 3.49e-08 | 61 |
myeloid cell | 3.46e-07 | 108 |
common myeloid progenitor | 3.46e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.37e-10 | 82 |
bone marrow | 4.59e-10 | 76 |
skeletal element | 2.36e-09 | 90 |
immune system | 7.75e-09 | 93 |
hematopoietic system | 2.97e-08 | 98 |
blood island | 2.97e-08 | 98 |
hemolymphoid system | 3.08e-08 | 108 |
skeletal system | 4.31e-08 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.