FFCP PHASE1:Hg19::chr3:101039430..101039443,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000064!9.64e-07!3;CL:0005012!9.64e-07!3;CL:0000067!9.64e-07!3;CL:0002304!9.64e-07!3 | |ontology_enrichment_celltype=CL:0000064!9.64e-07!3;CL:0005012!9.64e-07!3;CL:0000067!9.64e-07!3;CL:0002304!9.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.21e-07;15!CL:0000125;1.21e-07;15!CL:0000095;6.19e-07;17 | |ontology_enrichment_celltype_v019=CL:0000243;1.21e-07;15!CL:0000125;1.21e-07;15!CL:0000095;6.19e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.21e-07,15;CL:0000125,1.21e-07,15;CL:0000030,1.21e-07,15;CL:0000339,1.21e-07,15;CL:0000095,6.19e-07,17;CL:0000123,6.19e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.67e-38;3!UBERON:0006238;2.68e-11;10!CL:0000339;1.21e-07;15 | |ontology_enrichment_development_v019=UBERON:0003056;4.67e-38;3!UBERON:0006238;2.68e-11;10!CL:0000339;1.21e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.94e-10;11!DOID:5409;2.11e-08;4 | |ontology_enrichment_disease_v019=DOID:3093;1.94e-10;11!DOID:5409;2.11e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,1.94e-10,11;DOID:5409,2.11e-08,4 | |||
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|short_description=p3@IMPG2 | |short_description=p3@IMPG2 | ||
}} | }} |
Revision as of 16:30, 17 November 2012
Short description: | p3@IMPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IMPG2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -11bp_to_NM_016247, uc003duq.1_5end |
EntrezGene: | IMPG2 |
HGNC: | 18362 |
UniProt: | F1T0J3Q9BZV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.21e-07 | 15 |
glial cell | 1.21e-07 | 15 |
glioblast | 1.21e-07 | 15 |
glioblast (sensu Vertebrata) | 1.21e-07 | 15 |
neuron associated cell | 6.19e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.19e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.69e-57 | 2 |
regional part of epithalamus | 2.69e-57 | 2 |
secretory circumventricular organ | 2.69e-57 | 2 |
circumventricular organ | 2.69e-57 | 2 |
epithalamus | 2.69e-57 | 2 |
gland of diencephalon | 2.74e-29 | 4 |
neuroendocrine gland | 2.74e-29 | 4 |
regional part of diencephalon | 2.74e-29 | 4 |
retina | 1.26e-19 | 6 |
photoreceptor array | 1.26e-19 | 6 |
posterior segment of eyeball | 1.26e-19 | 6 |
diencephalon | 3.15e-17 | 7 |
future diencephalon | 3.15e-17 | 7 |
eye | 8.73e-13 | 21 |
visual system | 8.73e-13 | 21 |
sense organ | 2.80e-11 | 24 |
sensory system | 2.80e-11 | 24 |
entire sense organ system | 2.80e-11 | 24 |
pre-chordal neural plate | 9.09e-08 | 61 |
brain | 5.84e-07 | 68 |
future brain | 5.84e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.94e-10 | 11 |
lung small cell carcinoma | 2.11e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.