FFCP PHASE1:Hg19::chr9:117692733..117692744,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!3.46e-51!140;CL:0002087!4.45e-49!119;CL:0000988!4.54e-46!182;CL:0000037!1.93e-45!172;CL:0000566!1.93e-45!172;CL:0002031!3.77e-42!124;CL:0002057!1.22e-39!42;CL:0002032!3.53e-39!165;CL:0000837!3.53e-39!165;CL:0000860!3.12e-36!45;CL:0000766!2.43e-31!76;CL:0002194!1.45e-30!63;CL:0000576!1.45e-30!63;CL:0000040!1.45e-30!63;CL:0000559!1.45e-30!63;CL:0002009!2.94e-29!65;CL:0000839!9.05e-28!70;CL:0000557!3.30e-27!71;CL:0000791!4.30e-24!18;CL:0000789!4.30e-24!18;CL:0002420!4.30e-24!18;CL:0002419!4.30e-24!18;CL:0000790!4.30e-24!18;CL:0000763!1.88e-23!112;CL:0000049!1.88e-23!112;CL:0000084!4.77e-20!25;CL:0000827!4.77e-20!25;CL:0000625!5.80e-16!11;CL:0000838!1.02e-14!52;CL:0000542!2.68e-14!53;CL:0000051!2.68e-14!53;CL:0000624!1.45e-11!6;CL:0000080!3.40e-11!6;CL:0000134!6.68e-11!358;CL:0002320!2.64e-10!365;CL:0000219!3.03e-08!390;CL:0000842!7.36e-07!3 | |ontology_enrichment_celltype=CL:0000738!3.46e-51!140;CL:0002087!4.45e-49!119;CL:0000988!4.54e-46!182;CL:0000037!1.93e-45!172;CL:0000566!1.93e-45!172;CL:0002031!3.77e-42!124;CL:0002057!1.22e-39!42;CL:0002032!3.53e-39!165;CL:0000837!3.53e-39!165;CL:0000860!3.12e-36!45;CL:0000766!2.43e-31!76;CL:0002194!1.45e-30!63;CL:0000576!1.45e-30!63;CL:0000040!1.45e-30!63;CL:0000559!1.45e-30!63;CL:0002009!2.94e-29!65;CL:0000839!9.05e-28!70;CL:0000557!3.30e-27!71;CL:0000791!4.30e-24!18;CL:0000789!4.30e-24!18;CL:0002420!4.30e-24!18;CL:0002419!4.30e-24!18;CL:0000790!4.30e-24!18;CL:0000763!1.88e-23!112;CL:0000049!1.88e-23!112;CL:0000084!4.77e-20!25;CL:0000827!4.77e-20!25;CL:0000625!5.80e-16!11;CL:0000838!1.02e-14!52;CL:0000542!2.68e-14!53;CL:0000051!2.68e-14!53;CL:0000624!1.45e-11!6;CL:0000080!3.40e-11!6;CL:0000134!6.68e-11!358;CL:0002320!2.64e-10!365;CL:0000219!3.03e-08!390;CL:0000842!7.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.10e-51;18!CL:0000789;6.10e-51;18!CL:0002419;6.10e-51;18!CL:0000084;1.08e-35;25!CL:0000625;2.03e-30;11!CL:0000624;7.71e-26;6!CL:0000226;4.46e-14;3!CL:0000842;4.46e-14;3!CL:0000898;8.79e-14;3!CL:0000542;3.68e-11;53!CL:0000815;6.29e-10;2!CL:0000792;6.29e-10;2!CL:0002677;6.29e-10;2!CL:0002087;4.58e-09;104!CL:0000860;6.62e-07;33!CL:0002057;6.62e-07;33 | |ontology_enrichment_celltype_v019=CL:0000791;6.10e-51;18!CL:0000789;6.10e-51;18!CL:0002419;6.10e-51;18!CL:0000084;1.08e-35;25!CL:0000625;2.03e-30;11!CL:0000624;7.71e-26;6!CL:0000226;4.46e-14;3!CL:0000842;4.46e-14;3!CL:0000898;8.79e-14;3!CL:0000542;3.68e-11;53!CL:0000815;6.29e-10;2!CL:0000792;6.29e-10;2!CL:0002677;6.29e-10;2!CL:0002087;4.58e-09;104!CL:0000860;6.62e-07;33!CL:0002057;6.62e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.90e-51,18;CL:0000789,5.90e-51,18;CL:0002420,5.90e-51,18;CL:0002419,5.90e-51,18;CL:0000790,5.90e-51,18;CL:0000084,1.05e-35,25;CL:0000827,1.05e-35,25;CL:0000625,1.37e-30,11;CL:0000738,1.04e-26,136;CL:0002087,1.53e-26,115;CL:0000624,1.21e-25,6;CL:0000988,2.72e-20,177;CL:0000037,3.14e-20,168;CL:0000838,4.52e-20,52;CL:0000542,1.29e-19,53;CL:0000051,1.29e-19,53;CL:0002031,1.76e-19,120;CL:0002032,8.61e-17,161;CL:0000837,8.61e-17,161;CL:0000226,2.53e-14,3;CL:0000842,2.53e-14,3;CL:0000898,9.89e-14,3;CL:0000815,8.82e-10,2;CL:0000792,8.82e-10,2;CL:0002677,8.82e-10,2;CL:0000766,5.47e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;6.10e-51;18!CL:0000051;3.68e-11;53 | |ontology_enrichment_development_v019=CL:0000790;6.10e-51;18!CL:0000051;3.68e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.78e-34!102;UBERON:0003061!1.78e-34!102;UBERON:0002193!1.08e-32!112;UBERON:0002371!3.81e-24!80;UBERON:0001474!1.31e-21!86;UBERON:0002405!1.96e-20!115;UBERON:0004765!1.23e-16!101;UBERON:0001434!1.23e-16!101;UBERON:0003081!5.24e-10!216;UBERON:0002384!1.69e-09!375;UBERON:0000178!3.89e-08!15;UBERON:0000179!3.89e-08!15;UBERON:0000463!3.89e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!1.78e-34!102;UBERON:0003061!1.78e-34!102;UBERON:0002193!1.08e-32!112;UBERON:0002371!3.81e-24!80;UBERON:0001474!1.31e-21!86;UBERON:0002405!1.96e-20!115;UBERON:0004765!1.23e-16!101;UBERON:0001434!1.23e-16!101;UBERON:0003081!5.24e-10!216;UBERON:0002384!1.69e-09!375;UBERON:0000178!3.89e-08!15;UBERON:0000179!3.89e-08!15;UBERON:0000463!3.89e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.02e-10;2!UBERON:0005058;8.02e-10;2!UBERON:0009113;8.02e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;8.02e-10;2!UBERON:0005058;8.02e-10;2!UBERON:0009113;8.02e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.30e-10,4;UBERON:0005058,1.30e-10,4;UBERON:0009113,1.30e-10,4;UBERON:0003295,1.30e-10,4;UBERON:0005562,1.30e-10,4;UBERON:0002390,1.10e-08,98;UBERON:0003061,1.10e-08,98;UBERON:0002193,1.48e-07,108;UBERON:0003351,3.28e-07,6 | |||
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| ||
|short_description=p2@TNFSF8 | |short_description=p2@TNFSF8 | ||
}} | }} |
Revision as of 21:12, 17 November 2012
Short description: | p2@TNFSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TNFSF8_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_uc004bji.1_5end |
EntrezGene: | TNFSF8 |
HGNC: | 11938 |
UniProt: | P32971 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.90e-51 | 18 |
alpha-beta T cell | 5.90e-51 | 18 |
immature T cell | 5.90e-51 | 18 |
mature T cell | 5.90e-51 | 18 |
immature alpha-beta T cell | 5.90e-51 | 18 |
T cell | 1.05e-35 | 25 |
pro-T cell | 1.05e-35 | 25 |
CD8-positive, alpha-beta T cell | 1.37e-30 | 11 |
leukocyte | 1.04e-26 | 136 |
nongranular leukocyte | 1.53e-26 | 115 |
CD4-positive, alpha-beta T cell | 1.21e-25 | 6 |
hematopoietic cell | 2.72e-20 | 177 |
hematopoietic stem cell | 3.14e-20 | 168 |
lymphoid lineage restricted progenitor cell | 4.52e-20 | 52 |
lymphocyte | 1.29e-19 | 53 |
common lymphoid progenitor | 1.29e-19 | 53 |
hematopoietic lineage restricted progenitor cell | 1.76e-19 | 120 |
hematopoietic oligopotent progenitor cell | 8.61e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.61e-17 | 161 |
single nucleate cell | 2.53e-14 | 3 |
mononuclear cell | 2.53e-14 | 3 |
naive T cell | 9.89e-14 | 3 |
regulatory T cell | 8.82e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.82e-10 | 2 |
naive regulatory T cell | 8.82e-10 | 2 |
myeloid leukocyte | 5.47e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.30e-10 | 4 |
hemolymphoid system gland | 1.30e-10 | 4 |
thymic region | 1.30e-10 | 4 |
pharyngeal gland | 1.30e-10 | 4 |
thymus primordium | 1.30e-10 | 4 |
hematopoietic system | 1.10e-08 | 98 |
blood island | 1.10e-08 | 98 |
hemolymphoid system | 1.48e-07 | 108 |
pharyngeal epithelium | 3.28e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.